Zalophus californianus (California sea lion): 113925762
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Entry
113925762 CDS
T07874
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X1
KO
K06558
macrophage scavenger receptor 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113925762 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113925762 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
zca04090
]
113925762 (MSR1)
Membrane trafficking [BR:
zca04131
]
Endocytosis
Phagocytosis
Scavenger receptors
113925762 (MSR1)
CD molecules [BR:
zca04090
]
Proteins
113925762 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
THOC7
Cas_Csm6_HEPN
DUF4446
Motif
Other DBs
NCBI-GeneID:
113925762
NCBI-ProteinID:
XP_027456170
UniProt:
A0A6J2DKJ4
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Position
2:complement(180824176..180914980)
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AA seq
454 aa
AA seq
DB search
MERWNSFLDQQDDTDNCSESVKFDARSMTALLPLYPKNGPTLQEKLKSLKAALIVLYLLV
FVVLIPIIGIMAAQLLKREMKNCTVGPINANEISQSLTGKGNNSEDEMRFQEAVKEQMSN
MEKRIQYISDTEANLIDSLHFQNFSLVTDQRFNDVLLQLSTLVSSVQGHGNTIDEIFKSL
ISLNTTLLDLQLSIETLNGKVQDNTLKQQEDMSRLEELVYNASAEIMSVKEKQVNLEQEI
KGEVKVLNNITNDLRLKDWEHSQTLKNITLIQGPPGPPGEKGDRGPAGERGPQGIPGAVG
SPGLKGDRGAIGFSGPRGFPGPPGKTGRTGNPGPKGQKGDRGSGSILTPLKTVRLIGGRA
PHEGRVEIFHNGQWGTVCDDHWELRGGQVICRSLGYQGVQAVHKGAYFGQGTGPIWLNEV
FCFGRESSIEDCKIRQWGVRGCSHAEDAGVTCTS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaacggtggaatagctttcttgatcaacaggatgacactgataactgctcagaatcc
gtgaagtttgatgcccgctccatgacagccttgctccctctgtatcctaaaaatggccct
acccttcaagagaaactgaagtccctcaaagctgcactgattgtcctttatcttcttgtg
tttgtagttctcatacccatcatcggaataatggcagcacagcttctgaagagggaaatg
aagaattgcacagttggtccaattaatgcaaatgaaatatctcaaagtctcacaggaaaa
ggaaataacagtgaagatgagatgagatttcaagaagctgttaaggaacaaatgagcaac
atggagaagagaatccaatatatttcagatacagaagccaatctcatagattcattgcat
ttccaaaattttagtctggtgactgatcaaagatttaatgatgttcttctccagttgagt
accttggtttcctcagttcagggacacggaaacacgatagatgaaatcttcaagtcgtta
ataagtctgaataccacattgcttgatttgcagctcagtatcgaaacactgaatggcaaa
gtccaagacaatacattaaaacagcaagaggacatgagtagattagaggagcttgtgtac
aatgcatcagcagaaattatgtctgtgaaagaaaaacaagtgaatttggaacaggaaata
aaaggagaagtgaaagtactgaataacatcactaatgatctcagactgaaagattgggaa
cactctcagacattgaaaaatatcactttaattcaaggtcctcctggaccccctggtgaa
aaaggagatagaggtcctgctggagaacgtggtccacaaggcattccaggtgcagtaggt
tctccaggtcttaaaggtgataggggagccattggcttttctggacctcgaggattccca
gggccaccggggaagaccgggaggacaggaaatcctggaccaaaaggccagaagggggac
agagggagtggaagcatactaactccacttaaaacagtacgactgattggtggtagagct
cctcatgagggcagagtggagattttccacaatggccagtggggcacagtttgtgatgac
cactgggaactgcgaggtggacaggtcatctgtaggagtctgggataccaaggtgttcaa
gctgtgcataaaggagcttactttggacaaggtactggtccaatttggctgaatgaagta
ttttgttttgggagagaatcatctatcgaagactgtaaaattagacaatggggtgtgaga
ggctgttcacacgctgaagatgctggagtcacttgtacttcataa
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