Zalophus californianus (California sea lion): 113926428
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Entry
113926428 CDS
T07874
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03320
PPAR signaling pathway
zca04659
Th17 cell differentiation
zca04919
Thyroid hormone signaling pathway
zca04920
Adipocytokine signaling pathway
zca04928
Parathyroid hormone synthesis, secretion and action
zca05200
Pathways in cancer
zca05202
Transcriptional misregulation in cancer
zca05207
Chemical carcinogenesis - receptor activation
zca05216
Thyroid cancer
zca05222
Small cell lung cancer
zca05223
Non-small cell lung cancer
zca05226
Gastric cancer
zca05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
113926428 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
113926428 (RXRB)
03320 PPAR signaling pathway
113926428 (RXRB)
04919 Thyroid hormone signaling pathway
113926428 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
113926428 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113926428 (RXRB)
05202 Transcriptional misregulation in cancer
113926428 (RXRB)
05207 Chemical carcinogenesis - receptor activation
113926428 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
113926428 (RXRB)
05216 Thyroid cancer
113926428 (RXRB)
05222 Small cell lung cancer
113926428 (RXRB)
05223 Non-small cell lung cancer
113926428 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
113926428 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113926428 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
zca03310
]
113926428 (RXRB)
Transcription factors [BR:
zca03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
113926428 (RXRB)
Nuclear receptors [BR:
zca03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
113926428 (RXRB)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
113926428
NCBI-ProteinID:
XP_027457090
UniProt:
A0A6J2DKU5
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Position
7:116944958..116951795
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AA seq
538 aa
AA seq
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MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAAAGEQQ
TPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPPSPPGLPLPPSAASSLGGSGAP
PPPPMPPPSLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDV
KPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTY
SCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEM
PVDRILEAELAVEQKSDQSVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPH
FSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDR
SLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYC
KQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcggcggcagcagccggagaacaacaa
accccggagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggac
tcccgaagcccagacagttcctccccgaatccccttccccagggggcccctcccccttct
cctcctgggctacccctacctccgtcagcagcctcatcccttggaggttccggggcccca
cccccacccccgatgccacccccctcactgggctcccctttccccgtcatcagctcttcc
atggggtcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagt
ccccagattaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtg
aagccaccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggg
gctggcaaaaggctatgtgccatctgcggggaccgaagctcaggcaaacactatggggtt
tacagctgtgagggctgcaaaggcttcttcaagcgcaccatccggaaggacctgacctac
tcgtgccgggacaacaaagactgcaccgtggacaagcgccagcgcaaccgctgtcagtac
tgccgctaccagaagtgcctggccaccggcatgaagagggaagcggtacaggaggagcgg
cagcgggggaaggacaaagacggggatggggagggggctgggggagctccggaggagatg
cctgtggacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagagcgtt
gagggtcctgggggaaccgggggtagcggcagcagcccaaatgaccctgtgacgaacatc
tgtcaggcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacac
ttttcctccttgcctctggatgaccaggtcatattgctacgggcaggctggaatgagctc
ctcattgcttccttctcccaccgatccattgatgtccgagatggcatcctcctcgccaca
ggtcttcatgtgcaccgcaactcagcccattctgcaggcgtgggagccatctttgatcgg
tccctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaag
acagagcttggctgcctgagggcaatcattctgttcaatccagatgccaagggcctctcc
aaccctagtgaggtggaggttctgcgggagaaagtgtacgcctcactggagacctactgc
aagcagaagtaccctgagcagcagggacggtttgccaagctgctgctacgtcttcctgcc
ctcaggtccatcggccttaagtgtctagagcatctgtttttcttcaagctcattggagac
acccccattgacaccttcctcatggagatgcttgaggctccccaccagctggcctga
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