Zalophus californianus (California sea lion): 113926635
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Entry
113926635 CDS
T07874
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04721
Synaptic vesicle cycle
zca04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
113926635 (RIMS1)
04721 Synaptic vesicle cycle
113926635 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113926635 (RIMS1)
Membrane trafficking [BR:
zca04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
113926635 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
113926635 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
113926635
NCBI-ProteinID:
XP_027457591
UniProt:
A0A6J2DPD8
LinkDB
All DBs
Position
7:complement(84064010..84553891)
Genome browser
AA seq
1638 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAVCKTPRNAENQPHQPSPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICH
KTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQPSQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDTAPPSAQPD
RSKGAESSQQAVGPEQKQVSSRSRSEPPRERKKTPGLSEQNGKGAQKSERKRVPKSSVQP
GEGALEERERKERRESRRLEKGRSQDYPDVPEKREDRKAVDDEKQRKEEEYQTRYRSDPN
LARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAGAALPESKAGKRAPAAARAS
PPESPRAYSAERTAEARAPGAKQLTNHSPPAPRHGPVPAEALEPKAQEPLRKQSRLDPSS
AVLIRKSKREKVETMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVST
PEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRV
ILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWN
GKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKME
RPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPTRVDGRPRNP
YVKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQE
EESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQR
SQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGD
DQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSRDVDSQYLSEQDSEL
LMLPRAKRGRSAECLHTTSELQPSLDRARSASTNCLRPDTSLHSPERERGRWSPSLDRRR
PPSPRIQIQHASPENDRHSRKSERSSIQKQTRKGTASDAERVLPPCLSRRGYAALRATDQ
PVLRGKHPARSRSSEHSSVRTLCSTHHLAPGGSAPPSPLLTRMHRQASPTHLPPADTSFS
NRRGRQLPQVPVRSGSIEQEQEKYNSSTKASLVVEERTRQMKMKVHRFKQTTGSGSSQEL
DREQYSKYNIHKDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSEHPRG
RISSFTPKMQGRRMGTSGRAITKSTSVSGEMYTLEHNDGSQSDTAVGTVGAGGKKRRSSL
SAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSI
NSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLE
VEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP
QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTPLTR
RASQSSLESSTGPPCIRS
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgcggtcctcgcccacccacggtgcctccccccatgcaa
gagctgcccgacctgagccacctgaccgaggaagagaggaacattatcatggcagtgatg
gaccggcagaaggaagaggaggaaaaagaagaagccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgtctgcaaaacaccaagaaatgctgaaaaccagccccaccaacct
tcaccgagattgcatcaacaatttgaaagctataaagaacaagtgagaaaaataggggaa
gaagcacggcgttaccagggagagcacaaagatgatgctccgacttgtggaatctgtcat
aaaaccaagtttgccgatgggtgcggccatctctgctcctactgccgcaccaagttctgc
gcccgctgtggaggccgcgtgtctctgcgatccaacaacgaggacaaagtggttatgtgg
gtatgcaatttatgtcgaaagcaacaagaaatcttaaccaaatctggggcgtggttcttt
ggaagtggccctcagcagccaagtcaggatggaaccttaagtgatacagctacaggtgct
ggttctgaggtaccaagagaaaagaaagcacggctccaagagcgatcacggtcgcagaca
cccctgagcacagcagctgcctcctcccaggacacagctcctcccagcgcacaaccagac
aggagcaaaggggctgagtcctcacagcaagccgtggggcccgaacagaagcaggtttca
tccaggtctagaagtgaacctccgagagagaggaagaagactccagggctctctgagcag
aatggtaaaggagcccagaagagcgagcggaaacgcgtgccgaagtcctcggtgcagccg
ggagagggggccctggaagaacgcgagcggaaagaaaggcgggaaagccgaaggcttgag
aaagggcggtcacaggactaccccgacgtgccggaaaaacgagaggatcgcaaagcggtg
gacgacgagaagcaaaggaaagaggaggagtaccagaccaggtaccgcagcgatccgaac
ctggcgcggtaccccgtgaaaccgccgccagaggagcagcagatgcgcatgcacgcccga
gtgtcccgcgcgaggcacgagcggcgccacagcgacgtggcgctgccgcgcaccgaggcg
ggcgccgcgctgcccgagagcaaggccggcaagcgcgcaccggccgccgctagggcctcg
ccgccggagtcgccgcgggcctattcggccgagaggactgcggaagccagggcgccgggc
gccaagcagctcacgaaccacagcccgccggcacccaggcatgggccggtccccgcagaa
gccctggagcccaaagcccaggagcccctcaggaagcagagccgcctggaccccagctcg
gccgtcctcatcaggaagtccaagcgcgagaaggtggagaccatgctgcggaacgactcc
ttgagctctgatcagtccgagtccgtgcggccgtccccgcccaagccgcaccggtccaag
aggggcggcaagaagcggcagatgtctgtgagcagctccgaggaggagggcgtgtccacg
ccggagtacaccagctgcgaggacgtggagctcgagagcgagagcgtcagcgagaaaggt
gatttggattattactggttggatcctgccacgtggcatagccgagaaacatcgcctatt
agttcgcatcctgtaacgtggcaaccatctaaagaaggggaccgattaattggacgtgtt
attcttaacaagagaacaaccatgcccaaagaatcaggtgcattactgggtctgaaagtt
gttggagggaaaatgactgacttaggacgccttggtgccttcatcaccaaagtaaagaag
ggtagccttgcagatgtagttggacacttaagagcaggggatgaagttctagaatggaat
ggtaaacccctgccgggagctacaaatgaagaagtttacaacattattttagaatcaaaa
tcagaacctcaagttgaaattattgtttcaaggcctattggtgacattccacggattcct
gagagctcccatcctccactggagtccagttcaagttcctttgaatctcagaagatggaa
aggccttccatttctgttatttctccaacaagtcctggagctctaaaagatgccccacaa
gtcttgccaggacaactttctgtgaagttgtggtatgataaagtgggacaccagctgatt
gtaaatgttcttcaagcaacagatttaccgactagagtagatgggcgtcccaggaatccc
tatgtgaaaatgtattttcttccagatagaagtgataaaagcaaaaggaggaccaaaaca
gtaaagaaagtcctagaaccaaaatggaatcaaacatttgtctattcacatgtacatcgt
agagattttcgagaacggatgttagaaataactgtgtgggatcaaccaagagtacaagaa
gaagagagtgaatttcttggagagatcctcatagaattggagacagcacttttagatgat
gagccacattggtataaacttcagacacatgatgaatcctcactacctctgcctcagcca
tcacctttcatgccaaggcgacacattcatggagaaagctctagcaaaaaactacaaaga
tctcagcgaatcagtgatagtgacatctcagattatgaggttgatgatggtattggagta
gttcctccagtaggttataggtctagtgctagagaaagtaaatctacaacattaactgtg
ccagaacagcaaagaacaactcatcaccgctcacgttcagtatctcctcaccgcggcgat
gatcagggaaggccgcgttcacgtttaccaaatgtgccattacagaggagtttagatgaa
attcatccaacaagaaggtcacgttctccaaccagacaccatgatgcctcccgaagtcca
gttgatcacagatccagagatgtggatagtcagtatttatcagaacaagacagtgagctt
cttatgctgcccagagcaaaacgaggacgaagtgcagaatgcctacatactaccagtgaa
ctgcagccctcccttgacagggctaggagtgctagtaccaactgcttgagaccagatact
agtttgcattcaccagaacgagaaaggggtagatggtccccctccctagataggagacga
cctcctagccccaggattcaaatccagcatgcgtctccggagaatgacaggcactccaga
aagtctgagagatctagcatccaaaaacagactaggaaaggcactgcctctgatgcagaa
agggttctcccaccatgcctttctagaaggggatacgcagccctaagagcgactgatcag
ccagtccttaggggaaaacatcccgctcgctcaaggtcgagtgagcactctagtgtcaga
acactgtgttctacccaccaccttgcccccggaggttcggcgccaccttctccgcttctg
acaagaatgcacagacaagcaagtccaacccatcttcctcctgcagacacatccttcagc
aatcggaggggacgacagctcccacaggtgccagtgagaagcggcagtatagaacaagaa
caagaaaaatataactcttccacaaaagcaagcttagtagtggaggagcgaacaagacag
atgaaaatgaaagtgcatcgatttaagcagacaacagggtctggttctagtcaagaactt
gatcgcgagcaatattccaagtataacatacataaagatcagtacagaagctgtgataac
gtctctgccaaatcatcagatagtgatgtcagtgatgtgtccgccatttcccgaaccagc
agtgcctcacgcctcagcagcacaagctttatgtcagagcaatctgagcaccccaggggt
agaatcagttcatttacccctaaaatgcaaggcagacggatggggacttcaggaagagcc
atcacgaagagcaccagtgtgagtggggagatgtacacactggagcacaatgacggcagt
cagtctgacacggctgtgggtacagttggagcaggtggaaagaaaaggagatccagcctg
agtgccaaagtggttgccatagtgtctagaaggagtagaagcacatcccaactaagccaa
acagagtcaggccacaagaagttaaaaagtaccatccagagaagcacagaaacaggaatg
gcagccgaaatgaggaagatggtaaggcaaccaagtcgagaatctactgacggcagcatc
aacagttacagctctgagggaaacttaatatttcctggagtacgactaggagcagacagt
caattcagtgattttcttgatggactgggaccagctcagcttgttggccgccaaaccctt
gccacccctgcaatgggtgacatacaaattggaatggaggataaaaagggccaattagaa
gtggaagttattagggcacgaagtctcacacaaaaacctggttccaagtctacacccgct
ccatacgtcaaagtgtatctgttggaaaacggggcgtgcatagccaagaagaagacgcgg
atcgcccggaaaaccctggaccctctgtaccagcagtccctggtgttcgacgagagcccg
cagggtaaagttcttcaggtgattgtctggggggactatggcagaatggaccataaatgc
tttatgggtgtggctcagatcttgttggaagaactcgatctatccagtatggtaatcgga
tggtacaagttattcccaccatcatccctggtggatcccacactcactcccctaacccgc
cgggcttcccagtcatctctggaaagttcaactggtcctccctgcatccgctcatag
DBGET
integrated database retrieval system
