KEGG   Zalophus californianus (California sea lion): 113926782
Entry
113926782         CDS       T07874                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca03018  RNA degradation
zca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113926782
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113926782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zca03019]
    113926782
   03041 Spliceosome [BR:zca03041]
    113926782
Messenger RNA biogenesis [BR:zca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113926782
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113926782
Spliceosome [BR:zca03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113926782
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 113926782
NCBI-ProteinID: XP_035584435
UniProt: A0A6P9FB42
LinkDB
Position
7:complement(130726780..130731350)
AA seq 133 aa
MGIYQGKHDIAKKKLREELRQCQIKLLKDSYCVNYTCFKFGTATAPNTTTNPSQLLPLEL
MDKCTGSRIHIVMKSDKEIVGTLLGFDDFVRMVLEDVTEFEITPEGRRITKFDQILLNGN
NITMLVPGEGPEV
NT seq 402 nt   +upstreamnt  +downstreamnt
atgggcatataccaaggaaagcacgacatagcaaagaagaaactgagagaggaactacga
cagtgccagataaagctgctaaaggacagttactgtgttaattacacatgttttaagttt
gggacagccacggcacctaacactacaaccaacccctcgcagctgctgccgctagagctt
atggacaaatgtacaggatcaagaattcacattgtgatgaagagtgataaagaaattgtt
ggcacacttttgggatttgatgactttgtccgtatggtactggaggatgtcactgagttt
gaaatcacaccagaaggaagaaggatcactaaatttgatcaaattttgctaaatggaaat
aatataacaatgctggttcctggagaaggtcctgaagtatga

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