KEGG   Zalophus californianus (California sea lion): 113926956
Entry
113926956         CDS       T07874                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca03010  Ribosome
zca04120  Ubiquitin mediated proteolysis
zca04137  Mitophagy - animal
zca04140  Autophagy - animal
zca05012  Parkinson disease
zca05022  Pathways of neurodegeneration - multiple diseases
zca05167  Kaposi sarcoma-associated herpesvirus infection
zca05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:zca00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    113926956
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113926956
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113926956
   04137 Mitophagy - animal
    113926956
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    113926956
   05167 Kaposi sarcoma-associated herpesvirus infection
    113926956
  09164 Neurodegenerative disease
   05012 Parkinson disease
    113926956
   05022 Pathways of neurodegeneration - multiple diseases
    113926956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:zca03011]
    113926956
   04121 Ubiquitin system [BR:zca04121]
    113926956
Ribosome [BR:zca03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    113926956
  Archaea
    113926956
Ubiquitin system [BR:zca04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   113926956
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ribosomal_L40e Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 Plexin_RBD Dsc3_N OTU1_UBXL UBL_UBAC1
Other DBs
NCBI-GeneID: 113926956
NCBI-ProteinID: XP_035584438
UniProt: A0A6P9FLA4
LinkDB
Position
7:51896324..51896843
AA seq 99 aa
MQIFVKTLMGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKC
NT seq 300 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctgatgggcaagaccatcaccctcgaggtcgagcccagt
gacactattgagaatgtcaaagccaaaatccaagacaaggagggcatcccgcctgaccag
cagcgtctgatttttgcgggcaaacagctggaagatggccatactctgtcagactataat
atccagaaagagtccaccctgcacttggtgcttcgcctccggggtggcatcattgagcct
tccctccgccaactggcccagaaatacaactgtgacaagatgatctgccgcaagtgttag

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