KEGG   Zalophus californianus (California sea lion): 113927049
Entry
113927049         CDS       T07874                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
  KO
K10610  DNA damage-binding protein 1
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca03420  Nucleotide excision repair
zca04120  Ubiquitin mediated proteolysis
zca05161  Hepatitis B
zca05170  Human immunodeficiency virus 1 infection
zca05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:zca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113927049
  09124 Replication and repair
   03420 Nucleotide excision repair
    113927049
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    113927049
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    113927049
   05161 Hepatitis B
    113927049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zca04121]
    113927049
   03400 DNA repair and recombination proteins [BR:zca03400]
    113927049
Ubiquitin system [BR:zca04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     113927049
DNA repair and recombination proteins [BR:zca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      113927049
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      113927049
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_2nd Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 113927049
NCBI-ProteinID: XP_027458409
UniProt: A0A6J2DQ16
LinkDB
Position
7:108064799..108067950
AA seq 619 aa
MRSSPQPYSSLFSHTEMEHEVACLDITPLGDGNGLSPLCAIGLWTDISARILKLPSFELL
HKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTV
LRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNS
TLTIGTINEIQKLHICTVPLYESPRKIYYQEVSQCFGVLSSRIKVQDTSGGTTALRPSAS
TQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLV
SCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN
GKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKP
MEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEEQQHLQDVGL
FHLGEFVNVFCHGSLVMQNXTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKV
IKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISWPKMQEVVANLQYDDSSGMK
REATADDLIKVVEELTRIH
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgcggtcgagcccccagccgtactcctctttgttcagccacacagagatggaacatgaa
gtggcctgcttggacatcaccccactgggggacggcaatgggctgtcccctctttgtgcc
attggcctctggacagacatctcggcgcgtatcttgaagctgccctcttttgagctactg
cacaaagagatgctgggtggagagatcattcctcgttccatcctgatgaccacttttgag
agtagccactacctcctttgtgccttgggagatggggcgcttttctactttgggctcaac
attgagacaggcctgttgagcgaccgtaagaaggtgactctgggcacccagcccacggta
ttgaggactttccgttctctttctactaccaacgtctttgcttgctctgaccgccccact
gtcatctacagcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtcaac
tacatgtgtcccctcaactctgatggctatcctgacagcctggcactggccaacaacagc
accctcaccattggcaccatcaatgagatccagaagctgcacatctgcacagttcccctc
tacgagtctcccaggaagatctactatcaggaagtgtcccagtgcttcggggtcctctcc
agccggatcaaagtccaggacacaagtggcggcacaacggccctgaggcccagtgccagc
acccaggccctgtccagcagcgtcagctccagcaagctgttctccagcagcacggcaccg
cacgagacctcctttggagaagaggtggaggtgcacaatctcctcatcatcgaccagcac
accttcgaagtgcttcatgcccaccagttcctgcagaatgagtatgccctcagcctggtc
tcctgcaagctgggcaaagaccccaacacatacttcatcgtgggcacggccatggtgtat
cctgaagaggcggagcccaagcagggtcgaatcgtggtctttcagtattctgatggaaaa
ctacagaccgtggccgagaaggaagtgaaaggagccgtgtactccatggtggaattcaac
ggcaagctgttagccagcatcaacagcacggtgcggctttatgagtggacaacagaaaag
gagcttcgtaccgagtgcaatcactacaacaacatcatggccctctacctgaagaccaag
ggcgacttcatcctggtgggcgacctgatgcgctcagtgctgctgcttgcctacaagccc
atggaggggaactttgaagagattgctcgagactttaatcctaactggatgagtgctgtg
gaaatcttggatgatgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgt
cagaaggatagcgctgccaccactgacgaggagcagcaacacctccaggatgtcggtctc
ttccacctgggcgagttcgtcaacgtcttttgccacggctccctggtcatgcagaatncc
acccccacgcagggctcggtgctctttggcacagtcaacggcatgatcgggctggtgacc
tcgctgtcagagagctggtacaacctcctgctggacatgcagaatcggctcaataaagtc
atcaagagtgtgggcaagattgagcactccttctggagatcttttcatactgagcgaaag
acagaaccagccacgggcttcatcgatggagacttgatcgagagtttcctggacatcagc
tggcccaagatgcaggaggttgtggcaaacctacagtatgatgatagcagcgggatgaag
cgagaggccacagcagatgacctgatcaaggttgtggaggagctgacgcggatccattag

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