Zalophus californianus (California sea lion): 113927071
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Entry
113927071 CDS
T07874
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04151
PI3K-Akt signaling pathway
zca04510
Focal adhesion
zca04512
ECM-receptor interaction
zca04518
Integrin signaling
zca04820
Cytoskeleton in muscle cells
zca04974
Protein digestion and absorption
zca05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
113927071 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113927071 (COL9A1)
04518 Integrin signaling
113927071 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113927071 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113927071 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
113927071 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
113927071 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zca00535
]
113927071 (COL9A1)
Proteoglycans [BR:
zca00535
]
Extracellular matrix (ECM) proteoglycans
Others
113927071 (COL9A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Toxin_R_bind_N
DUF4882
Motif
Other DBs
NCBI-GeneID:
113927071
NCBI-ProteinID:
XP_027458459
UniProt:
A0A6J2DQ62
LinkDB
All DBs
Position
7:85919235..86011827
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AA seq
921 aa
AA seq
DB search
MKNFWKIPVFFFVCSFLGSWASAAVKRRPRFPVNSNSNGGNELCPKVRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSTALQVAYKLGNNVDFRIPTRHLYPNGLPEEYSFLTTFRMT
GNTLEKNWTIWQIQDSSGKEQVGVKINGQTKSVAFSYKGLDGSLQTATFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIQSLPIKPRGKIDVDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPSRETCHELPVRITPGETTDQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGHKGEPGVPGSRGFPGRGIP
GPPGPPGAAGLPGELGRVGPVGDPGRRGPPGPPGPPGPSGTIGFHEGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGETGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLRGITGIVGAK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGVPGTKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQL
GNSGKPGQQGLPGDVGPRGPRGLPGSRGERGPVGPPGPPGKLGSPGSPGLPGLPGPPGLP
GMKGDRGVVGEPGPKGGQGSSGEEGEAGERGELGEIGLPGPKGSVGNPGEPGLRGPEGSR
GLPGVEGPRGPPGPQGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVMQEHLAEMAAS
LKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGIKGPPGALGLRGPKGDLGER
GERGPPGRGPKGLPGATGLPGEPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTLQAGQRAFIKGPDQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttctggaaaattccagttttcttctttgtatgcagtttcctgggatcttgg
gcatctgctgctgtcaagcgtcgcccaaggttccctgttaattcaaattctaatggcgga
aatgaactctgtccaaaggtcaggattggtcaagatgatttaccaggctttgacttgatt
tctcagttccaggtagataaagcagcatctagaagagctattcagagggtagtaggatca
actgcattacaagtggcttacaaattgggaaataatgtagacttcaggattccaacaagg
catttatatcccaatggtctgcctgaagaatactcctttttaactacttttcggatgact
ggaaacacacttgaaaagaactggaccatttggcagattcaggattcctcagggaaggag
caagttggcgtgaagattaatggccaaacaaaatctgttgcattttcatacaagggactg
gatggaagtctccaaactgcaaccttttcaaatttgccttccttgtttgattcccagtgg
cataagatcatgatcggtgtggaaaggagtagtgctactctttttgttgattgcaacagg
attcaatctttacctataaagccaagaggcaaaattgatgttgatggctttgctgtgctg
ggaaaacttgcagataatcctcaagtttctgttccgtttgaacttcagtggatgctgatc
cattgtgacccactacgccccagtagagaaacttgccatgagctgccagtccgaataact
cccggcgagaccaccgaccagagaggtcccccgggcgagcagggtccccccgggcccccg
ggtccccctggagttccaggcatcgatggcatcgacggtgaccgaggtccaaagggtccc
ccaggccccccgggtcccgctggagaaccgggcaagccaggagctcccggcaagccgggc
acgccgggcgccgacggattaacaggacctgatggatcccctggttctgttggaccaaga
gggcacaaaggagaacctggtgttcctggatctcgtggatttccaggccgcggtattcct
gggccccctggtcctcctggggcagcaggactccctggagagcttggccgtgttggacca
gttggtgaccctgggagaagaggaccacctggcccccctggccccccaggacccagtgga
acaattggctttcatgaaggagatccattgtgtcccaattcctgtccaccaggtcgctca
ggatatccaggcttaccaggcatgaggggtcataaaggggctaaaggagaaactggtgaa
cctggaagacaaggtcacaagggtgaagaaggtgaccagggggaacaaggagaagttgga
gctcaaggacctccaggagctcaaggattacgaggcatcacaggcatagttggggccaaa
ggggaaaaaggtgctcggggcttagatggagaacctggacctcaaggtcttcctggtgca
cctggtgatcaaggacagcgaggacctccaggagaaataggtcccaagggagatagaggc
cctcaaggttctagaggaattcctggcgtccctgggaccaaaggagacacgggcttgcca
ggtgtggatggccgtgacggaatacctggaatgcccgggacaaagggtgaaccagggaag
cctgggcctcctggtgatgcaggattgcagggcttacctggtgtgcctgggattcctggt
gcgaagggtgttgctggtgaaaagggtaacacaggtgctccagggaagcctggtcagctg
gggaattcaggcaaaccgggccaacaggggctgccaggcgatgtgggaccccgaggaccc
cgggggcttcctggcagtagaggggagagaggaccagtgggacccccaggaccaccaggt
aaactgggttctcctggcagtcctggcctccctggcttgcctggcccccctggccttcct
ggaatgaaaggtgacaggggagtagtcggtgagcctggtccaaagggtggacagggttcg
tctggtgaagaaggtgaagcaggagaaaggggtgaacttggagagataggattacctgga
ccaaagggatctgtgggtaaccctggggagcccggcttgagggggcccgaaggaagtcgg
gggcttcctggcgtggaaggcccaagaggaccccctggaccacaaggcgtgcagggagag
cagggtgccaccggcctgcccggcatccagggccctccaggtagagcaccaacagatcag
cacattaagcaggtttgcatgagagtcatgcaagagcatcttgctgagatggctgctagt
ctcaagcgaccggactcaggggcgtctggcctccctgggaggcctggaccccccggtccc
ccgggaccacctggggagaatgggttcccaggccagatgggacttcgtggcctcccaggc
attaaaggcccccctggtgctctcggtttgagggggcctaaaggtgacttgggagaaagg
ggggaacgtggccctccaggaagaggtcctaagggattacctggagctacaggtctccca
ggtgaaccaggtcctgccagctacgggaggaatggccgggatggcgagcgaggcccccca
ggggtggcaggaattcccggggtacctggccccccgggccctcctggccctcctgggttt
tgcgagccagcctcctgcaccctgcaggctgggcaacgggcatttatcaaaggtcccgat
cagtga
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