Zalophus californianus (California sea lion): 113927295
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Entry
113927295 CDS
T07874
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113927295 (TRERF1)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
113927295 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-C2H2_2
Myb_DNA-bind_7
zf-met
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
113927295
NCBI-ProteinID:
XP_027458827
UniProt:
A0A6J2DVM7
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All DBs
Position
7:108128842..108327158
Genome browser
AA seq
1223 aa
AA seq
DB search
MGDQQLYKTNHVAHSGENLFYQQTPLGIHGGLNHNYGNTVTGAGMEAPQASPISPHFPQD
TRDGLGLPVGSKNLGQVDTSRQGGWAGHTGPGNHVQLRGNLTNSNMMWGTPAQPEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPMEPPAPALPARYQQVPQQAHPGFPSGLSKPALQVGPHASQGHLYYDYQQPL
AQMPVQGGQPLQATPMLSQHMQQMQQHQYYAAAPPQAGQQHMPLQDLPQPPPPPQPRPPQ
PQQPQQQLQQRQGPMQIPQYYQPQPAMQHLQEQPQQQQQQMHLQAPSYHRDPHQYGPEQA
HAVQLIQLGSMPQYYYQEPQQPYSHPLCQQSHLPQHQQREDSQPKTYPSDRQAQAMLSSH
GDLGPPDAGMGDPASSDLNRLSGALPHRPLLSPGGIHLNSVGPQHQQLSPSALWPQMHLP
DGRAQPGSPESSGQPKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRASPSL
KQEEGEKALPPQPQPQPQPPLPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPGSQGFA
SSIVAAPSARDKPASSMSDDEMPVLEIPKKQQPGAAKAEEALKSLPEKKKFRHRPEPLFI
PPPPSYTANPAASYSGATLYQSQLRSPRVLGDHLLLDPAHELPPYTPPPMLSPVRQGSGL
FSNVLIAGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNVTVTPGPGEQTIDVEPRINI
GLRFQAEIPELQDVSALARDTHKATLVWKPWPELENHDLQQRVENLLNLCCSSALPGGGT
NSEFALHSLFEAKGDVMAALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLERKLFNKALA
TYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLAEIDDSVVSEAAQSLLMR
APLPPHTQTSEEEEELEEEEEDPEEDRKSTREEESEVPKSPEPPPGPVLAPADGPPLHAL
SQPSGSFICEMPNCGADCRCHVTPFLPQVFSSRQALNGHARIHGGTNQVTKARGATPCGK
QKPGSTQSGYCSVKSSPSHSTTSSETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQ
QRQKAQKAAFAAEMAATIERTAGAPGLLPLDQLSLIKPIKDVDLLDGDVVQQLGGVMEEA
EVVDTDLLLDDQDSVLLQGDAEL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcagcaactctacaagaccaatcacgtggcccacagtggtgagaaccttttt
taccaacagaccccacttggcatccatggcgggctgaaccacaactatgggaatacagtc
acaggggctggaatggaggcccctcaggcgtcacccatctccccccacttccctcaagat
actcgggatggtctaggcttgcctgttggctccaaaaacctgggccaagtggatacctcg
aggcagggagggtgggcaggtcataccgggcctggaaaccacgtccagttacgcggcaac
ctgaccaactcaaacatgatgtgggggaccccggcccagcctgagcccaccgatggctac
caatatacctactcccaggccagcgagatccggacccagaaactcaccagcggtgtcctg
cacaagctagactccttcacccaggtgttcgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccaatcggcagtgatggatggggcccctgacagtgcc
ctccgccagttgctgtcccagaagcccatggagcccccagcgccggctcttcctgctcgc
taccagcaggtgccccagcaggctcatcctggtttccccagcgggctgtccaaaccagcc
ctgcaggtagggccacacgccagccaggggcacctgtattacgactaccagcagccgctg
gctcagatgccagtgcagggaggacagccactgcaggccaccccaatgctgtcccagcac
atgcagcagatgcagcagcaccagtattacgcggcagcaccgccacaggctgggcagcag
cacatgcccctgcaggacctgccgcagccgccaccgccgccgcagccccgcccgccgcag
cctcagcagccccaacagcagctgcagcagcggcagggtccgatgcagatacctcagtat
taccagccccaacccgcgatgcagcacttgcaagagcagcctcagcaacagcagcagcag
atgcacctgcaggcaccctcttatcacagggacccccaccagtacggcccggagcaggcg
cacgctgtccagctgatccagctgggctccatgccccagtactactatcaggagccccag
cagccctacagccaccccctctgccagcagagccacctgccccagcaccagcagcgtgag
gacagtcagcccaagacctacccgagtgacaggcaggcccaggccatgctgagctcccac
ggtgacctggggcctcctgatgcaggaatgggagacccagcaagctcggacctgaaccgg
ctcagcggggccctcccccaccggccgctcctgtcccccggtgggatccacctcaacagc
gtggggcctcagcaccagcagctgtctcccagtgccctgtggccccagatgcacctacct
gatggcagagcccagccagggtcccccgagtcaagtggccaaccaaaaggagtgtttggg
gagcaatttgatgccaagaacaaactgacgtgctccatctgcctgaaggaattcaagagc
ctacctgccctgaatggccacatgcggtcccatgggggaatgagagcctcccccagcctc
aaacaggaggaaggagagaaggccctgccgcctcagcctcagcctcagccccagcctcca
ctgccacctccgccgccaccgcagctccctcccgaggcagaaagcctcacgcctatggtc
atgcccgtgtctgtccctgtcaagcttctcccgcccaagccaggctctcagggcttcgcc
agcagcatcgttgccgccccctccgccagagacaagccagccagctcgatgtcggacgac
gagatgcccgtgctcgaaatccccaagaagcagcagcccggcgcggccaaagccgaagaa
gccctcaagagcttgccggagaagaaaaagttccggcaccggcccgagccgctcttcatc
ccgccaccgccctcctacaccgccaaccccgccgcctcgtactcgggcgccaccctgtac
cagagccagctgcgctccccgcgcgtcctcggggaccacctgctgctggaccccgcccac
gagctgcccccctacacgcccccgcccatgctgagcccggtgcgccagggctcggggctc
ttcagcaacgtgctcatcgcggggcacggccccggcgcccacccgcagctgcccctcacg
cccctgacgcccacgccgcgggtgctgctgtgccgctccaacagcattgatggcagcaac
gtgacagtcaccccagggcctggagagcagaccattgatgttgaaccacgcatcaacatt
ggcttgaggttccaagcagagatcccagaacttcaggatgtctctgccttggcccgggac
acacacaaggccacactggtatggaagccctggccagagctggaaaaccatgacctccag
caaagagtggagaatctcctgaatttgtgctgttcaagtgcgttgcctggtggagggacc
aattctgaatttgctttgcactctcttttcgaggccaaaggtgatgtgatggccgccctg
gaaatgctgctgctgcggaagccggtcaggttaaaatgccatcctttagcaaattaccac
tatgccggttcggacaagtggacttccctagaaagaaaactgtttaataaagcactagcc
acttacagcaaagactttatttttgtacagaagatggtgaagtctaagacagtggctcag
tgtgtggagtactactacacgtggaaaaagataatgcgcttggggcggaaacaccggaca
cgcctcgcagaaatcgatgattctgtggtgagtgaagctgctcagtcgctgcttatgcgg
gccccgctcccgccccacacccagacgagtgaagaagaagaagagttagaggaggaggag
gaggacccagaagaagataggaaatccacgagagaagaggagagcgaagtgcccaagtct
cccgagccgccgccaggccccgtgctggctcccgcggacgggccgcccctgcacgccctc
agccagccctccggctcctttatctgtgagatgcccaactgcggggctgactgtagatgt
catgtcactccctttcttccccaggtgttcagctcccgacaggcactgaacggccacgcc
cgcatccacggtggcaccaaccaggtgaccaaagcccggggggccaccccctgtgggaag
cagaagccgggcagcacccagagcgggtactgctcagtgaagagctccccctctcatagc
accaccagcagcgagacagaccccaccaccatcttcccctgcaaggagtgcggcaaagtc
ttcttcaagatcaaaagccgtaatgcgcacatgaaaacacacaggcagcaggaggaacag
cagaggcaaaaggctcagaaggcagcttttgccgccgaaatggccgccactatcgagagg
accgcgggggcgccggggctgctgcccctggaccagctgagcctgatcaaacccatcaag
gacgtggacctcctcgatggcgacgtggtccagcagttgggaggcgtcatggaagaggct
gaggtcgtggacacggatctcctcttggatgaccaagattcggttttgcttcagggtgac
gcggaactataa
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