Zalophus californianus (California sea lion): 113927303
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Entry
113927303 CDS
T07874
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113927303 (KDM1B)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
113927303 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox
Pyr_redox_2
Thi4
SWIRM
DAO
HI0933_like
FAD_binding_3
Lycopene_cycl
Pyr_redox_3
FAD_oxidored
FAD_binding_2
NAD_binding_9
GIDA
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_7
Phage_zn_bind_8
zf-RING_2
KARI_N
TrkA_N
Shikimate_DH
YjeF_N
Motif
Other DBs
NCBI-GeneID:
113927303
NCBI-ProteinID:
XP_027458836
UniProt:
A0A6J2DR97
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Position
7:136847927..136904837
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AA seq
820 aa
AA seq
DB search
MATPRRRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGGSEKKYRRCEKSGCTV
ACPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIHLTPQIARTYRCGMKSNTTIKPE
TSDHCSLPEDLRVSEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHSA
AGSTSPGKLEHSKAVPSALVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLI
NTGVLGVGTDQHLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVW
DDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKR
MDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIHFSELEEQVLHFHLSN
LEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLMPGYSVILEKLAEGLDIRLESPVQSID
YSGDEVQVTITDGTGCTAQKVLVTVPLALLQKGAIHFNPPLSDKKMKAINSLGAGIIEKI
ALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKQHSVLMSVVAGEAVASVR
TLDDKQVLQQCMAVLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDII
AEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccccggaggaggacaaagaaaaaagcatcttttgatcattctccggatagc
ctgcctttgaggagctccggtaggcaggcgaagaaaaaagcaacagagacaacagacgag
gacgaagacggcgggtcagagaagaaatataggcgatgtgagaagtcaggctgcacagta
gcgtgtcccgtgtgctttgcaagcgcttctgaaagatgtgccaaaaacggctacacatcc
cgatggtatcacctctcctgtggggagcatttctgtaacgaatgctttgaccattactac
agaagccacaaggacggatatgacaaatacactacctggaaaaaaatatggactagcaat
ggaaaaaccgaacctagtcccaaagctttcatggcagaccagcagctcccctactgggtt
cagtgtacaaaacctgagtgtagaaaatggagacaacttaccaaggaaatccatcttact
ccacagatagcaaggacctaccgatgtggtatgaaatcaaatactaccattaagcccgag
acctcagatcattgctcccttccagaggatctaagagtgtcggaagtttccaaccactgg
tggtactccatgctcatcctccctcctttgctgaaagacagcgtggcggcacccctgctc
tctgcctactaccccgactgcgtgggcatgagtccctcctgcaccagcacccacagtgca
gctggcagcaccagccctgggaagctggagcactccaaggctgtcccctctgcgctggtt
ccaggcatgaaccggtacttccagcctttctaccagcccaatgagtgtggcaaagccctg
tgcgtgcggccggacgtgatggagctggacgagctctatgagttcccagagtattcccga
gaccccaccatgtacctggctttgcggaacctcatccttgcgctgtggtacactaactgc
aaagaagctcttacccctcagaaatgtattcctcacatcattgtccggggtctcgtgcgt
atccggtgtgttcaggaagtagagaggatactttattttatgacgaggaaaggtctcatc
aacacgggagttcttggcgttggcaccgaccagcatcttcttcctaaagattaccacaac
aaatcagtcatcatcatcggggctggtccagcaggattagcagctgctaggcaattgcat
aactttggaattaaggtaactgtcctggaagccaaagaccgaattggaggccgagtatgg
gatgataaatcttttaaaggtgtcacagtgggaagaggagcccagattgtcaatggctgt
atcaacaacccagtagcactaatgtgtgaacaacttggcatcagcatgcataaatttgga
gagagatgtgacttaattcaggaaggtggacgaataactgaccccactattgacaagcgc
atggattttcattttaatgctctcttggatgttgtctctgagtggagaaaggataagact
cagctccaagatgttcctttaggagaaaagatagaggagatctacaaagctttcatcaag
gagtctggtatccatttcagtgaacttgaggagcaggtgcttcatttccacctcagcaac
ctggagtatgcctgcggcagcaacctccatcaggtgtctgctcgctcctgggaccacaac
gaattctttgcccagtttgctggtgaccatactctgctaatgcctggctactccgtaatc
cttgaaaaactagcagaaggcctagatattcggctcgagtctccagtacagagcattgat
tattctggagatgaagtgcaggttaccatcacggatgggacagggtgtacagcacaaaag
gtattagtcactgtccccctggccttactgcagaagggggccattcactttaacccaccg
ctgtcagacaagaagatgaaggctatcaacagcttaggcgcaggcatcattgaaaagatt
gccttgcaatttccttatcgattttgggacagtaaagttcaaggggctgactttttcggt
cacgtacctcctagtgccagcaagcgggggctttttgctgtgttctatgacatggatccc
cagaagcagcacagcgtgctgatgtcggtggtcgccggggaggcggtggcgtccgtgagg
accctggatgacaagcaggtgctgcagcagtgcatggctgtcctccgggagctgttcaag
gagcaggaagtcccagatcccacgaagtattttgtcactcggtggagcacagacccctgg
atccagatggcgtacagctttgtgaagacaggtgggagcggagaagcctacgatatcatt
gccgaggaaatacaaggaacggtcttttttgctggcgaggcaacaaacaggcattttcca
caaactgttacaggggcatatttgagtggtgttcgagaagcaagcaagatcgcagcattt
tga
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