Zalophus californianus (California sea lion): 113927317
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Entry
113927317 CDS
T07874
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04014
Ras signaling pathway
zca04015
Rap1 signaling pathway
zca04024
cAMP signaling pathway
zca04517
IgSF CAM signaling
zca04520
Adherens junction
zca04530
Tight junction
zca04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
113927317 (AFDN)
04015 Rap1 signaling pathway
113927317 (AFDN)
04024 cAMP signaling pathway
113927317 (AFDN)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113927317 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113927317 (AFDN)
04530 Tight junction
113927317 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
113927317 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
Yop-YscD_cpl
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
113927317
NCBI-ProteinID:
XP_027458861
UniProt:
A0A6J2DSW7
LinkDB
All DBs
Position
7:complement(1930387..2075218)
Genome browser
AA seq
1917 aa
AA seq
DB search
MSASGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI
RVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDAVPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAVRQ
ASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLERRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPKDYCIAR
VMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPSDKGVLVFQLKRRPPDYIPKKTKKHV
DGKLLKGKERAEGSGYGSALPPEKLPYLVELSPGRRDRFACYNHHPYEDGSDSRDKPKLY
RLQLSVTEVGTEKFDENSIQLFGSGIQPHHCDLTNMDGVVTVTPRSMEAETYVEGQRISE
TTMLQSGMKVQFGTSHVFKFVDPSQDHALAKRSVDAGLTTKGPRHKPGIVQETTFDLGGD
VHSGTALPTSKSTTRLDSDRVLSASSTVERGMVKPMIRGERQQDYRRQENRTQDAPGPEL
ILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQHRPDVSPTER
THKVIAIVNRMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRIT
LDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSL
LRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEK
QGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAPDEP
FIPTDLIENVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGL
QEFLDPLCQRGFCRLIPHARSPGTWTIFFEGADYESHLLRENTELAQPLRKEPEIITVTL
KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADGDGRLAAGDQLLSVDGRSLVGLSQE
RAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELY
NNSAPNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPG
TTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPNY
EEKPHMHADSNHSSIAIQRVTRSQEELREDKAYQLERHRIEAVLDRKSDSDMWIHQSSSV
GSSTSSQEHLDHSSKSGTPASTLTKSGPGRWKTPAAVQPVPVAVSQPVQTDLPPPPPPPP
THYAGDFDGIPMDVPLPPPPAGQTGPVSAQAAAAERRKREEHQRWYEKEKARLEEERDRK
RREQERKLGQMRSQSLNPAPFSPVTVPHVKPEKPSTLQRPQETVIRELQPQQQPRTIERR
DLQYITVSQEELSSGDSLSPDPWKRDAREKLEKQQQMHIVDMLSREIQELQSKPERSAEE
SDRLRKLMLEWQFQKRLQESKQKDEEEEEEDDDVDAVLIVQRLEAERRARQTALPAISVL
DLLQDEERRRQQQLEEMRRREAEDRARQEEERRRQDEERAKRDAEEKRRQEEGYYSRLEA
ERRRQHAEAERRLLEPEEPGLCRPPLPRGYELPSPSPPAAAPPPPPQRTASSLQAQTLSP
DSVYTARLVSYHEEEEEDRSLAGQDKRSGTRTSHGHLLLPAALKPQQPPCPPRPASDGIF
LSNSFQPPSACANSTAPKAGQPPPPPKKPGFYQPSHSKGPNSYMGSSGTAVGAHDAYRDP
RERLSKSHDADVPGSSGAPENLTFKERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgagcggccgcgacgaggagcggcggaagctggccgacatcatccaccactgg
aacgccaaccggctggacctgttcgagatcagccagcccaccgaggatttggagtttcat
ggagtgatgagattttattttcaagataaagctgctgggaattttgcaacaaaatgcatt
cgggtctctagtactgccaccactcaagatgtgatcgagacgctggcggagaaattccgg
cctgacatgcggatgctgtcatcccccaagtactccctctatgaagtgcacgtcagcgga
gaagaaagaagattggatatagatgagaagcccctggttgttcagttgaattggaataaa
gatgatcgagagggcagatttgttcttaagaatgagaatgatgccgttcctcctaagaag
gctcaaagcaatggacctgaaaagcaggagaaagaaggtgttatccagaacttcaagaga
actctctcaaagaaagaaaagaaggagaaaaagaagagagaaaaagaggcagtgaggcag
gcgtctgataaggacgataggcctttccaaggggatgacattgagaattcccgactggct
gctgaggtttacaaagacatgcctgaaaccagctttacccgaacgatttcgaatccagag
gtggtcatgaagcgtcgccggcagcagaaactagagaggaggatgcaggagttccggagc
tctgacgggcggcctgactcaggtggaacattgagaatttatgcagatagtttaaaacca
aatattccctacaagacaatcctgctgtctaccacagatcctgcagactttgctgtggct
gaagctttagagaaatacggtctggaaaaagaaaatcctaaggattactgcattgcccgg
gttatgcttcctcctggagcccagcattctgatgaaaaaggtgctaaagaaattatcctt
gatgatgatgagtgtcctttacagatcttcagggaatggccaagtgacaaaggggtttta
gtctttcagttgaagaggaggccaccagactatatcccaaagaaaactaagaaacatgtc
gatgggaagctgctgaagggcaaggagagagcagaggggtcgggctacggctctgcgctc
ccgcctgagaagctgccctatctagtagagctaagcccagggagaagggatcgctttgcc
tgctacaaccatcacccttacgaagatggctcagattccagagataagcccaagctttac
cgccttcagttgagtgtcactgaggttgggacagaaaagttcgatgagaactccatccag
ctgtttggatcaggaattcagccccatcactgtgacctcacaaacatggatggagttgtc
actgtcacgccgagaagcatggaggccgagacttacgtggaaggacagcgcatctcagag
acaaccatgctgcagagtgggatgaaagtgcagtttgggacgtcacacgtgttcaagttt
gtggacccgagccaggaccatgctctggccaagagatctgtggatgcaggcctgaccacc
aagggtcccagacacaagcctggaattgttcaagagacaacttttgatttaggaggagat
gttcatagtggaacagcattaccaacaagcaagagcaccacgaggctggacagcgacagg
gtgttgtctgcctccagcacggtggagcgcgggatggtgaagccaatgatcagaggagaa
cggcagcaggattaccgcaggcaagaaaacagaactcaggatgctcctgggcctgaactg
atattgcctgcaagcattgaattcagggaaagttctgaagattcatttttatctgccatc
ataaattatactaacagctctacagtccattttaagttgtcacctacatatgtactgtat
atggcatgccggtacgtattgtccagccagcacagaccggatgtcagtcctacagagcgt
actcacaaagtgattgcgatagtcaacaggatggtgagcatgatggagggggtgatccag
gaagtagaccaggttgatcagaaacagaagaatattgcaggggcacttgccttctggatg
gccaatgcatctgagctgctcaacttcattaaacaggaccgagatcttagtcgaatcaca
ttggacgcccaagacgtcttagcacacttggttcaaatggcgtttaaatatctggttcat
tgtcttcaatcagaactgaataattatatgccagcctttctggatgatcctgaagagaac
agcctgcaaagaccaaaaatagatgacgttctgcacacactcacgggagccatgtctttg
ctgcgacgctgccgagtcaatgctgccctgaccatccagctcttctcccagctcttccac
ttcatcaacatgtggctcttcaacagattggtgaccgaccccgagtcgggactgtgctct
cactactggggggcgattatccgccagcagctgggacacgtggaagcgtgggcagagaag
cagggcttggagctggcagctgattgccacctcagccggatagtgcaggcaaccactttg
cttacaatggataaatatgcgcctgatgacattccaaatataaacagtacgtgctttaag
ttaaattcactgcaacttcaagccttgttacagaattaccactgtgcacccgatgagcct
tttatccccacggacctgatcgaaaacgtggtggccgtggctgaaaacacggctgatgag
ttggcgcgcagtgacgggagggaggtgcagctcgaagaggaccccgatctgcagttgcct
tttcttttgccagaagacggctactcttgcgatgttgtcaggaacattccaaatggttta
caagagtttttagaccctttgtgccagagaggattttgcaggttaatccctcacgcacgc
tcaccaggtacttggacgatattttttgagggtgcagattatgagagccaccttctgcgt
gagaacacggagctggctcagcctctgaggaaagaacccgaaataatcactgtgactctt
aaaaagcaaaatgggatgggcctcagcatcgttgcagcaaagggtgctggccaggataaa
cttggaatctacgtcaagtctgtcgtaaaaggaggtgctgctgatggggatggacgcctg
gctgcaggagaccagctcctcagtgtggacggacgaagtctggtaggactctctcaagaa
agggcagcagaactcatgacaagaacaagttctgtggtaacactagaagtcgcaaagcaa
ggagcaatttatcacggcctcgccaccctgctcaatcagccatccccaatgatgcaaaga
atttcagatcgtcgtggctcaggtaaaccccgtccaaagagtgaaggtttcgagctctac
aataattcagctccaaacgggtcacctgagagccctcagctgccttgggcagaatacagt
gaacctaagaaattgccaggtgacgacagactgatgaagaaccgggctgatcaccgctcc
agccccaacgtggcaaatcaaccccctagccccggagggaagagcacgtatgcccctgga
acgacagcgaagatcacgtctgtctccaccgggaacctctgcaccgaggagcagacccct
ccaccaagacctgaggcctaccccatccccactcagacgtacaccagagagtatttcacc
ttcccagcttccaaatcccaggaccggatggctcctcctcagaaccagtggccaaattac
gaggagaagccacacatgcacgcagacagtaatcactccagtattgcaattcagcgtgtt
acccgttcccaagaggaacttcgggaggataaagcttaccaactagagcggcatcggatt
gaggcagtcttggatcgcaagtcggatagtgatatgtggatccatcagagctcctccgtg
ggctccagcacctccagccaagagcacctggaccactcctccaagtcaggcacccccgcg
tccactctgaccaaaagcggccctgggcgctggaagacacccgccgccgtgcagcccgtg
ccagtggctgtctcccagccggtgcagacagacctgcccccgccacccccaccgcccccc
acacactacgctggagacttcgatggaatccccatggacgtgcctctccctccgcctcct
gccggccagaccggacctgtgtctgctcaggcggcggctgcagagcggaggaagcgggag
gagcaccagcgctggtatgagaaggagaaggcccgtctagaagaggagcgggacaggaag
cgaagggagcaggagcggaagctgggccagatgcgctcccagtccctgaacccggccccg
ttttctcctgtgactgtcccacacgtgaagccagaaaagccttctacgctccagaggccc
caggagacggtcattcgggagctgcagccccagcagcagccccgcacgatcgagcgcagg
gacttgcagtacattacagtcagccaagaggagctgtcgtctggggacagtctgtcccca
gacccgtggaagcgggatgcccgggagaagctggagaagcagcagcagatgcacatcgtg
gatatgttgagcagggagatccaggagctccagagcaagcctgagcgcagtgcggaggag
agcgaccgtctgcggaaactcatgctggagtggcagttccagaagaggctccaggagtcc
aaacagaaggacgaggaggaggaggaggaggacgatgacgtggacgccgtgctgatcgtg
cagcgcctcgaggccgagcgcagagcaaggcagactgctctgccagcaatctctgttcta
gatttgttacaggatgaggagcggaggcgtcagcagcagctggaggagatgcgcaggcgg
gaagcagaagatcgcgccaggcaggaagaggagcggcgccgccaggacgaggagagagca
aagcgagatgctgaagaaaagaggcgacaggaagaagggtattacagccgcctggaagcc
gagaggcgcagacagcacgcggaggccgagcgcagattgctggagccggaggagccgggt
ctgtgcagacccccgcttccacggggctatgagctcccgtccccgtcccctccggccgcc
gctcctcctcccccgcctcagcggaccgcctcctccctccaggcccagaccctgtcccca
gactctgtgtacaccgccaggctcgtctcgtaccacgaggaggaggaggaggaccgcagt
ctggcaggtcaggacaagcgctccggcacgaggacgtcccacgggcaccttcttcttccc
gccgcccttaagccacagcagcccccctgcccgccacgcccggcctccgatggcatcttt
ctctccaactcattccagccaccctcggcctgtgccaacagtactgctcccaaagcaggc
cagcccccgccccctccaaaaaagccaggcttctaccagcccagccactcgaaaggacca
aactcttacatgggatcgtctgggacagctgttggtgcccatgatgcttatcgggatccg
agagagagactgtctaaaagccatgatgcagatgtacctgggagttcaggagcccctgaa
aacttgacattcaaagagcgtcagcgtctgttttcacaaggtcaagatgtgtccaacaaa
gtaaaagcctctcgtaaattaacagaactggaaaatgagctgaacacaaaatga
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integrated database retrieval system
