Zalophus californianus (California sea lion): 113927361
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Entry
113927361 CDS
T07874
Symbol
CDKAL1
Name
(RefSeq) LOW QUALITY PROTEIN: threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zca03016
]
113927361 (CDKAL1)
Enzymes [BR:
zca01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
113927361 (CDKAL1)
Transfer RNA biogenesis [BR:
zca03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
113927361 (CDKAL1)
Prokaryotic type
Methylthiotransferases
113927361 (CDKAL1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
113927361
NCBI-ProteinID:
XP_027458954
UniProt:
A0A6J2DR62
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Position
7:139072107..139709247
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AA seq
577 aa
AA seq
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MPSASCDTLLDDIEDIVSQGDLKPQDRHSARKHVVPKARKRNTQKYLQEENSPPSDSTIP
GIQKIWMRTWGCSHNNSDGEYMAGQLAAYGYEITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVER
ARQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDTVLMEMKREYCVADFKRVVDFLKEKVPGITLATD
IICGFPGETDHDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMAQIPAQVKKQRTKDLS
RVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPTFMGKMIEVDIYE
SGKHFMKGQPVSDAKVYTPSINKPLAKGEVSGLTEDFRNRLGNHLSLVPHTSVVRRDPTS
SRMALRLQRLHQDCALRASVGLALFALLLAFLVKIYN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcgtcctgtgacacactactggacgacatagaagatattgtgtcacaggga
gatttaaagccacaagataggcattctgcacgaaagcacgttgttccaaaggcacgaaag
cgaaacacccaaaaatatttgcaagaggaaaacagtccaccaagtgacagcactattcca
ggcatacagaaaatttggatgcgaacatggggttgttctcataataattcggatggagaa
tatatggctggacaactagctgcttatggatatgaaattacagaaaatgcatcagacgct
gatttatggctcctgaatagttgtaccgtaaaaaacccagctgaagaccactttagaaac
tcaattaaaaaagctcaagaggagaacaagaagatagtgctcgctggctgtgttcctcaa
gcccagcctcggcaggactaccttaaaggactgagtatcataggggttcaacagatagat
cgagtggtagaagttgtggaggaaacaattaaaggtcactctgtgagactgctgggtcag
aaaaaggataatggaaagcgcttgggtggagcacgattggatttgccaaagatcaggaag
aatccactgatagaaatcatttccatcaatactgggtgtctcaatgcttgtacctactgc
aaaaccaaacacgccagaggaaatttggccagttacccaattgatgaactagtagaaaga
gccagacagtcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacaggg
gcttacggcagggacattggcaccaatctccccacactgctgtggaaactggttgaagtg
attcctgagggagcaatgctgaggcttggcatgacaaacccaccctatattttagagcat
ctggaggaaatggcaaaaatccttaatcatccccgagtctacgcttttctgcacatcccg
gtccagtctgcctctgacactgtcctcatggaaatgaaacgagaatactgcgtggctgac
ttcaaaagagtagtggattttctgaaagagaaagttcctggaataactcttgctacagat
attatctgtggttttcctggagaaacagatcacgattttcaagaaacagtgaagcttgtg
gaagagtacaaatttccaagcctctttattaaccagttttacccaagaccaggaactcct
gctgcaaaaatggcacaaattccagcacaagtgaaaaagcaaagaacgaaagatctttcc
cgggtattccattcctacaatccgtatgatcacaagattggtgaaagacaacaagtgtta
gtgacagaagaatcttttgattccaagttttatgttgcccacaatcgattctacgagcag
gttttagtgccaaagaaccccacattcatgggaaaaatgatcgaagtggacatttatgaa
tcaggcaaacattttatgaaagggcagccggtgtcagacgccaaagtatacacgccatcc
atcaacaaaccattagcaaagggagaagtctcaggtttaacagaggacttcagaaataga
cttgggaatcacctgagcttggtgccccacacttctgtggttcggcgggaccccacgagc
tccagaatggcactccgcttgcaaagactccatcaagactgtgcgctgagggcgtctgtg
ggcctggctctgtttgctctccttctggcttttttggtcaaaatctataattaa
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