Zalophus californianus (California sea lion): 113927399
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Entry
113927399 CDS
T07874
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04010
MAPK signaling pathway
zca04022
cGMP-PKG signaling pathway
zca05166
Human T-cell leukemia virus 1 infection
zca05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113927399 (SRF)
04022 cGMP-PKG signaling pathway
113927399 (SRF)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
113927399 (SRF)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
113927399 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113927399 (SRF)
Transcription factors [BR:
zca03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
113927399 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
113927399
NCBI-ProteinID:
XP_027459010
EnsemblRapid:
ENSZCAG00025009626
UniProt:
A0A6J2DRB0
LinkDB
All DBs
Position
7:complement(107539749..107549288)
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AA seq
507 aa
AA seq
DB search
MLPSQAGAAAALGRGSALGGSLNRTPTGRPGGGGGGTRGANGGRVPGNGAGLGPGRLERE
AAAAATTTPAPTAGALVYSGSEGDSESGEEEELGAERRGLKRSLSEMELVGGPEAAAAAT
GGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGT
QVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGF
EETDLTYQVSESDSSGETKDTLKQAFTVTNLPGTTSTIQTAPSTSTTMQVSSGPSFPITN
YLAPVSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFTLMPGGAVAQQVPVQAIQ
VHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTS
GLADGSLTVLNAFPQAPSTMQVSHSQVQEQGGVPQVFLTAPSGTVQIPVSAVQLHQMAVI
GQQAGSSSNLTELQVVNLDAAHSTKSD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaagctggggccgcggcggcgctgggccggggctcggccctggggggc
agcctgaaccggaccccgacggggcggccgggaggtggcggcggcgggactcgcggggct
aacgggggccgggttcccgggaacggcgcggggctcgggccgggccgcctcgagcgggag
gctgcagcagcagcgacaaccaccccggcgcccaccgcgggggccctagtctacagcggc
agcgagggcgactcggagtcgggcgaagaggaggagctgggcgccgagcggcgcggcctg
aagcggagcctgagcgagatggagctcgtcggtgggcccgaggcggcggcggcagccacc
ggaggctatgggccggtgagtggcgcggtgagcggggccaagccgggtaagaagactcgg
ggccgcgtgaagatcaagatggagttcatcgacaacaaactgcggcgctacacgaccttc
agcaagaggaagacgggcatcatgaagaaggcctatgagctgtccacgctgacagggaca
caggtgctgttgctggtggccagtgaaacaggccatgtgtatacctttgccacccgcaaa
ctgcagcccatgatcaccagtgagactggcaaggcactgattcagacctgcctcaactcg
ccagactctccacctcgctcagaccccaccacagaccagagaatgagtgccacgggcttt
gaagagacagacctcacctaccaggtgtcggagtccgacagcagtggggagaccaaggac
acactgaaacaggcgttcacggtcaccaacctgccgggtaccacctccaccatccaaaca
gcacccagcacctctaccaccatgcaagtcagcagcggcccctccttccccatcacgaac
tacctggccccagtgtctgctagcgtcagccccagcgctgtcagcagtgccaacgggact
gtgctgaagagtacaggcagtggccccgtctcctccgggggcctcatgcagctgcctacc
agcttcaccctcatgcctggtggggcagtggcccagcaggtcccagtgcaggccattcag
gtgcaccaggccccacagcaagcgtctccctctcgtgacagcagcacagacctcacgcag
acctcctccagtgggacagtgacattgcctgccaccatcatgacgtcatctgtgcctaca
actgtgggcggccacatgatgtaccctagtccccatgcggtgatgtatgcacccacctcg
ggcttggctgatggcagcctcaccgtgctcaatgccttcccccaggcgccatccaccatg
caggtgtcccacagccaggtccaggagcaaggtggcgttcctcaggtgttcctgacagcg
ccgtctgggacagtgcagatccctgtttctgcagttcagcttcaccagatggctgtgatc
gggcagcaggctgggagcagcagcaacctcaccgagttacaggtggtgaacctggacgcc
gcccacagcaccaagagtgactga
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