Zalophus californianus (California sea lion): 113928592
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Entry
113928592 CDS
T07874
Symbol
PCDHB3
Name
(RefSeq) protocadherin beta-3
KO
K16494
protocadherin beta
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
113928592 (PCDHB3)
Cell adhesion molecules [BR:
zca04515
]
Cadherins
Protocadherins
113928592 (PCDHB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
113928592
NCBI-ProteinID:
XP_035583661
UniProt:
A0A6P9FE46
LinkDB
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Position
5:33802493..33805864
Genome browser
AA seq
787 aa
AA seq
DB search
MEARGESFLRQRQVLFLFVFLGGSLAGSESRRYSVVEETERGYLIANLAKDLGLGVGELA
VRGAQVVSKGNKQHFQLNHQTGDLLLHEKLDREELCGPTEPCILHFQILLQTPLQFITNE
LQVIDVNDHSPVFFENEIQLKLLENTPPGTIIPLENAEDSDVGRNSLQNYTIAPNSHFHV
LTRSRRDGRKYPQLVLDKALDREEQPELILTLTALDGGSPPRSGIAQIHILVLDINDNAP
EFTQSLYEVQILENSPINSVIVTVSASDLDTGNFGTVSYAFFHASEEIRKTFQLNPITGD
ILLVKYLNYEVMNTYEVDIEAKDGGGLSGETTVIVQVVDVNDNPPELTLSSITSPIPENS
PETVVAVFSVSDLDSGDNGRIMCSIESNLPFILKPSIENFYTLVTNTALDRETRAEYNIT
ITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQAAYTLRVRENNSPALHIGSVSATDRDS
GANAQVTYSLLPPQDPQLPLASLVSINADNGQLFALRSLDFEALRAFEFRVGAADRGSPA
LSSQALVRVLVVDDNDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHSGEVRTARLLSERDAVKHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPDAAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAA
SGGGCSVPEGPFPGHLVDVSGAGTLSHSYQYEVCLTEGSGTNEFKFLKPVFPNGLVQDTE
TKAKLQF
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagaggggagagctttcttagacaaaggcaagtcctatttctctttgttttt
ctgggtgggtctctggctgggtctgagtcaagacgctactctgtggttgaggaaacagag
aggggctatttaatagccaacctagcaaaggatctagggctaggggtaggggaactggct
gtgaggggagcccaagttgtgtctaaagggaacaaacagcattttcagctcaaccatcag
accggcgatttgctcctgcatgagaaattggaccgggaagagctatgcggccccacagag
ccttgtatactgcattttcagatattactgcaaacccctttgcagtttattacaaatgag
cttcaggtcatagatgtaaacgaccattctccggtattctttgaaaatgaaatacagctg
aaactcttagaaaacacgccaccaggaaccataattcctttggaaaatgctgaggactcg
gatgtgggaagaaacagtctccaaaactacacgatcgcccctaattcccatttccacgtt
ctcacacgcagtcgtagggacggaagaaagtacccacaactagtgctggacaaagcactg
gaccgtgaggagcagccagagctcattttgaccctgaccgcgctggatggcggctctccg
ccccggtcggggatcgcccagatccacatcctggtcttagacataaacgacaacgcccca
gaatttacacagtcactctatgaggttcaaattttagagaacagccccattaactctgtt
attgtcacggtctcagcttctgacttagatacaggaaattttgggacagtatcatatgca
ttttttcacgcttctgaagaaattcgcaaaacttttcagctaaatccaattactggtgat
atcctgctagtcaaatacttgaattatgaagttatgaatacttatgaagtggacatagaa
gccaaggatggcggaggcctttcaggagaaaccacagtgatagttcaggtggttgatgtg
aacgacaacccaccagaactgaccttgtcttcaattaccagccctatccctgagaactca
ccggagactgtggtggctgttttcagtgtttctgatctagactctggagacaatgggaga
attatgtgttccatcgagagcaatctccccttcatcctcaaaccatcaatagagaatttt
tacaccctcgtgacaaacacagctctggaccgagagacaagagccgagtacaacatcacc
atcaccgtcaccgacctggggacccccaggctgaaaacccagcacaacataacggtgacg
gtctccgacgtcaacgacaacgccccggccttcagccaagccgcctacaccctgcgggtg
cgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccacggacagagactcg
ggcgccaacgcgcaggtcacctactcgctgctgccgccccaggacccgcagctgccgctg
gcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggat
ttcgaggcgctgcgggcgttcgagttccgcgtgggcgcggccgaccgcggctcgccggcg
ctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
agcggcgaggtgcgcacggccaggctgctgagcgagcgcgacgccgtcaagcacaggctg
gtggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgctcccggacgcggcggcggccgag
gcccgcgccgacccgctcaccgtctacctggtggtcgccttggcgtcggtgtcgtcgctc
ttcctgttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcggcg
tcggggggcggctgctcggtgcccgagggcccctttccgggccacctggtggacgtcagc
ggcgcggggaccctgtcccacagctaccagtacgaggtgtgtctgacggaaggatctggg
accaatgagttcaagttcctcaagccagtttttcccaatggcctggttcaagacactgag
actaaagcaaagctccaattttaa
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