Zalophus californianus (California sea lion): 113928796
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Entry
113928796 CDS
T07874
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113928796 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113928796 (DMXL1)
Membrane trafficking [BR:
zca04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113928796 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
113928796 (DMXL1)
RAVE complex
113928796 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR19_2nd
Beta-prop_HPS5
MIOS_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
113928796
NCBI-ProteinID:
XP_027460673
UniProt:
A0A6J2E3W8
LinkDB
All DBs
Position
5:14382490..14517285
Genome browser
AA seq
3047 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVISVFEPVNLPKQKKNLELYSQWQKSGQFFLESIAHNITWDP
AGNRLLTGSSCLQLWSNANLEKPSEDENPDKTDLNLGDWRCIWHCKTASQIHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRTAVTSPDKSSEKQSQGEMDFSFVYLAHPRAVNGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCSHWAEPINLTNNFRRNA
SSKERVQHALDVNLRHFRRGRRRSLAVVAHTGYLPHQQDPHHVHRNAPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSENNEKSGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQP
SSEASVEDSNQADVKSDEEMDDGVDDLKINHEKKELGSDKMVPNSSFVPLPSAAIDHQIE
VLLSEWSKNADMLFSIHPVDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLSKSIVMYACTKNVDLAIQQGKQKPSSLTRSTSMLISSAHSKSTNSLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPDVDNQKQPCDPVNTEECSLAQQNKSSIDVTFQDPNAVYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK
KLLYELSNPEISKYVGEVFNIVSQQSTARPGCIIALDPITKLQGRKTQLLHVFQEDFILN
NLEKKSLVGKDRILPDAGSSHNGFSEKFYLIVIECTQDNRSLLHMWNLHLKSIPVSLDEK
IDTKISEAVWQPEEHYSSSPEKIISPFSQKYQACRANLQSTSKLTLTSEMVYSQELHLPE
GVEIISVKPSAGHLSSSSIYPVCSAPYLLATSCSDEKVRFWRCRVTDGEPDTSKNGKMDL
VYIWEEWPLLIEDGLHSNSSITVPGRPVEVSCAHTNRLAVAYKQPASNSRSSQDFLMHVS
IFECESTGGSCWVLEQTIHLDELNTVLDSGISIDSNLVAYNKQEVYLSSKESITSNTKHL
VHLDWMSREDGSHILTVGIGSKLFMYGPLAGKVQEQAGKESLAFPLWESPKAVPLSKFVL
LRSMDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPVTTDSYNGST
PSIISLIKQSTSSSSGLHPPKKTLTRSMTSLAQKICGKKTAFDPSVDTEDSGLFEAAHVL
SPTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNEAESSHERRLRSLAISA
SGSTTRDPQAFNKSENTDYTEIDCVPPVPLYALLAADDDSCHSSLEKSSNPSTLNNSSQL
SKESYDELFQIPTLMTDHQAVETDEETAKPRVIDLSQYSPTYFGPEQAQVLSGHLLHSSL
PGLSRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLP
AYRAQLLHQGLSTSHFAWAFHSVAEEELLNMLPAMQRDDPTWSELRAMGVGWWVRNTRTL
RKCIEKVAKAAFYRKNDPLDAAIFYLAMRKKAVIWGLYRSQKDPKMTQFFGHNFEDERWR
RAALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDIQLALVIARLFESEFDTS
ATYKSILRKKVLGIDSPVNEFSSLNINMHYDPFLRSMAYWILEDYSGALETLIKQPVRED
DDQVMMSACNPAVFNFYNYLRTHPLLLRRHFGSSDVLSTHMSLTGKSGLAGTINLSERRL
FFTTASAHLKAGCPMLALEVLSKMPKVIKKTKPFCRTSSFLDTSQDCSPSSPLKLDAKED
KSSAIDWSQSLMNGFGSSSEGSSEKQSNSTLSFDWSQPSVVFQDDSLELKWDSDNDEEDE
DLPISMKELKPLQRKMGKKIDETSSNYTESLSTLDENDILSPSEDIIAVQLKFRACLKIL
TVELRTLSTGYEIDGGKLRYQLYHWLEKEVIALQRTCDYCSDGEDLQHAFGENGDEFGLN
GDAEDLLQQTKVKQLRENFQEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILL
LQESQQETSEPIFPSPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINLDS
PPHPDIQSSKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMMYQTVLLPHRHSLK
TGSLDEAITPNTSPAQWPGITSLIRLLNSSGEEAQSGLTVLLCEILTAVYLSLFIHGLAT
HSSNELFRIVAHPLNEKMWSAVFGGGAHVPSKEHTHSKALPVSSLVEEGEKQNKRFRPSK
ISCRDSAPPTSSSSVINQESLTVQEKFIPPELSIWDYFIAKPFLPPSQSRAEYDSEESLE
SDDDDDDVLASDFHLQEHSNSNSYSWSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSSP
LCHAVLKTLQCWEQVLLRRLEIHGGPPQNYIASHTSEESLSAGPAILRHKALLEPTNTPF
KSKHHLALSVKRLWQYLVKQEEIQETFIRNIFTKKRCLNESLEDNCETIKNSMMEEPNIN
KIEADLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTW
VDDDAEMESKGSEEFLVIHARDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMI
KKAINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFNYQGN
KFGIVDADGYLSLYQTNWKCCPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLST
DNRNICLWDTLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCAFDLRQRQQ
RQLFQSHDSPVKAIAIDPTEEYFVTGSAEGNIKIWSLSTFNLLHTFINEHARQSIFRNIG
TGVMQIETGPANHIFSCGADGTMKMRILPDQFSPLNEVLKNDVKFML
NT seq
9144 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgaccggggctgtgaaccctggcgaccactgcttctccgtg
ggcagcgtcggcgaccagcgcttcacggcttatgcatctggatgtgacattgttatactg
ggaagtgattttgaaagattacaaataatcccaggagctaaacatggaaatattcaagta
ggatgtgtagactgctcaatgcaacaaggcaagattgcagcatcctatggaaatgttatc
tctgtttttgaaccagttaacctaccgaagcaaaagaaaaatttggaattatatagtcag
tggcagaaaagtggccaattttttctggaatcaatagcacacaacataacttgggatcct
gcaggcaatcgtcttttaactggttctagctgtttacaactgtggtccaacgctaacttg
gagaaaccatctgaagatgaaaatccagataaaacagatcttaatttgggggactggaga
tgcatttggcattgcaaaactgcttcccaaattcatttaatgaaattttcaccagatgga
gaattttttgccactgctgggaaggatgactgtcttttaaaggtatggtataatgtagaa
aactggcggacagctgttacctctccggataaaagttcagaaaaacaatcccaaggagaa
atggacttttcctttgtatatctggcccatcctcgagctgtaaatggattttcctggcgt
aaaacaagcaaatacatgcctagggcttctgtatgtaatgtactgttgacttgctgcaaa
gataatgtatgtcgtctttgggtagagacatttttaccaaatgattgtttgctatatgga
ggtgactgcagccattgggcggaaccaattaatttaacaaataacttcagaagaaacgct
tccagtaaagaacgagttcaacatgctttagatgtaaatctgagacattttcgcagaggt
cggaggagatcgcttgctgttgtagcgcataccggatacctgccacaccagcaggaccct
catcatgtccacagaaatgctccgctgcatgccaacgcactttgccactttcatattgct
gccagcatcaacccagccacggacattccacttcttccttctatcacatctctaagtcta
agtgaaaataatgagaagagtgggccttttgtggtacactggctgaacaataaagagttg
cattttactttgtccatggaagtctttttacagcaactcagaaaaagttttgaacaacca
tcttctgaggccagtgtagaagactctaatcaggcagatgtaaaatctgatgaagaaatg
gatgatggtgtggatgatctgaaaataaatcatgaaaagaaggaattgggcagtgataaa
atggtaccaaattcaagttttgtaccgttaccatcagctgccattgatcatcagattgaa
gtacttctgtctgaatggagtaaaaatgcagacatgctcttcagtattcatcccgtggat
ggctctttgctagtttggcatgtggattggctggacgaataccagcctggtatgtttcgt
caagtccaggtgtcctttgtttccagaattcctgtagcttttcccacaggtgatgcgaac
tctctctctaaaagcatagtgatgtatgcctgcaccaagaatgttgacttggctattcag
caagggaaacagaaaccttctagcctcacacggtctacatcaatgcttatctcttccgcc
cacagtaaatcaactaatagtttaaaattaagtatttttactcctaatgttatgatgatt
tcaaagcatgctgatggctctctgaatcagtggctggtcagttttgctgaagaatctgct
ttttctacagttctcagtatttctcacaaatccagatactgtggtcatcgctttcatctt
aatgatttagcttgccactccgtattaccattattgctgacaacgtcacaccataatgca
ctaaggacaccagatgttgataatcaaaagcaaccttgtgatcctgtaaatactgaagag
tgttctttggcacaacagaataaaagcagcattgatgtgacatttcaggatcccaatgca
gtttatagtgagcttattctttggagggttgatccggttgggccattgtctttttctgga
ggtgtttctgagcttgcccggattaattctctacatgtttctgcattttccaatgtggca
tggctgcccacccttatacccagttactgtctaggtgcatactgcaactctcctagcgca
tgttttgtagcaagtgatgggcagtatctgagattatatgaggctgttattgatgccaag
aaacttctgtatgagctttctaatcctgaaatttctaaatatgttggtgaagtgtttaac
atcgtaagtcagcagtcaacagccaggccaggatgcattatcgcattagatcccattacc
aaacttcaaggcagaaaaacccagctgcttcatgtttttcaagaagatttcattttgaat
aaccttgagaagaaaagtctggtgggaaaagacagaatattacctgatgcaggcagctca
cataatggattttctgagaaattctacctaattgtaatagaatgtacccaagacaaccgt
tcattgttacacatgtggaatttacatttaaagtccattcctgtctcattggatgaaaaa
atagatacaaaaatatctgaagcagtttggcagccggaagaacattattcttcttctcca
gagaagatcatatctcctttttcacagaagtatcaagcttgcagagcaaatctccagagc
accagcaagttgactctgacttcagaaatggtttatagccaagagttgcatttgccagaa
ggagttgagataataagtgttaagccatcagcaggccatctgagttcttcttccatatat
cctgtgtgcagtgctccttatttattggcaacttcatgttcggatgagaaagtaagattc
tggagatgcagagtaacagatggagaacctgacacatcaaagaacggaaaaatggatctt
gtatacatttgggaagaatggccattacttattgaagatggacttcatagcaatagtagt
ataactgtccctggtaggcctgtagaagttagctgtgcacatacaaatcggttagcagtg
gcgtacaagcagcctgcatctaatagtaggtcttctcaggacttcctgatgcacgtcagt
atttttgaatgtgagtctacaggaggttcatgttgggtccttgaacagacgattcattta
gatgaattgaatacagtgttagattctggtattagtattgatagcaatttagtggcttat
aataagcaagaggtgtatttatccagtaaagagagtatcacatcaaacacaaagcattta
gttcacttagattggatgtctagggaagatggttctcatatcctcactgtaggaattgga
tcaaaactttttatgtatggacccctggctggcaaggtacaagaacaggctggtaaggaa
agcctagcctttcctctctgggaaagccctaaagctgtgcctctctctaaatttgtcctc
ttaagaagtatggacttggtttcttctgtggaaggctctccaccttttcctgtttcttta
tcatgggtccgggatggcatcctggtggtaggaatggattgtgaaatgcatgtatattcc
cagtggcagccatcttctaaacaggaacctgttacaacagattcgtacaacgggagcact
ccatctataataagtttaataaaacagagcacctcatcaagttctggattacatcctcca
aagaaaactctgactcgatccatgaccagtcttgcacagaaaatctgtggaaagaaaact
gccttcgatccttctgtggatacggaagattcaggtctttttgaagcagctcatgttctt
tccccaactttacctcagtaccatcccttgcagcttttggaactcatggaccttggcaag
gttcggagagcaaaggccatcttgtctcaccttgtcaagtgcatcgctggggaggttgtg
gcgctgaatgaagctgaatccagccacgagcgccgcctccggtctctcgctatcagtgct
agcggaagcactaccagggacccccaggctttcaacaaaagtgaaaatacggactacacg
gaaatagattgtgtccctccggttcccttatacgccttacttgcggcagacgacgacagc
tgccactcgtctttagagaagtctagtaatccgagtaccttaaataactcaagccagttg
tcaaaagaaagctatgatgagctttttcagatcccaacattaatgactgatcatcaagcg
gtagagacagatgaggaaactgccaagcccagggtcatcgacctttcgcagtacagccca
acttactttggtcctgagcaggctcaggttctctctggccacttacttcattccagtcta
ccgggactcagccggatggagcagatgtctctgatggccttagcagatacaattgcaact
accagcactgatatcggggagagcagagacagaagccaaggtggagaaactcttgatgaa
tgtggcttaaaatttcttttggctgttcgacttcatactttccttacaacttcccttcca
gcttatcgagctcagctccttcaccaaggcctgtctactagtcattttgcctgggcattt
cactcagtagcagaagaagagctgctgaacatgttgccagccatgcagagagatgatccc
acttggtctgaactgagagccatgggtgtggggtggtgggtccggaatacacgcacctta
cgcaagtgcatagagaaggtagccaaagcagccttttatagaaagaatgatcctttagat
gctgccattttttaccttgcaatgagaaagaaagctgtgatttggggattatatagatca
caaaaagaccccaagatgacacagttttttggacacaactttgaggatgagagatggcgt
agagcagctttaaagaatgctttttctttgttaggcaaacaaagatttgaacattctgca
gcattttttcttttagctggttgcctcagagatgcaattgaggtatgtcttgagaaactg
aatgacattcaattggctcttgtaatagcaagactctttgagtctgaatttgatacatct
gcaacatacaaatctattttacgtaaaaaagttttggggattgattctcctgtcaatgaa
ttcagttcactgaacataaatatgcattatgatccttttcttcggagtatggcatattgg
attttggaagattatagtggtgctctggaaacattaataaagcaacctgtcagagaggat
gatgatcaagtcatgatgtcagcctgtaatcctgcagtttttaatttctacaattatcta
agaacacatcctcttttgctaagacgtcattttggatcatctgatgtattgtccacacac
atgagtttaacaggaaaaagcggactggcaggaacaattaatttaagtgaaagaagatta
ttttttaccactgccagtgctcatttgaaagctggctgccctatgttagctttggaagta
ttatcgaagatgccaaaagttatcaagaaaacaaaacctttttgcagaacatctagcttt
ttggatactagtcaagactgttctccttcttctccattaaaattggatgcaaaggaagat
aagtcttctgctattgattggtcacagtcactaatgaatggttttgggtcttcttcagaa
ggttcctcagagaagcagtcaaattccactctttcttttgactggagccaaccaagtgtt
gtatttcaggatgactctttagaattaaaatgggacagtgataacgatgaagaagatgag
gatctccctatttcaatgaaagaactaaaacctttacagagaaaaatggggaaaaaaata
gatgaaacaagttctaattacacagaatctctcagcaccctagatgaaaacgacatttta
agtccatcagaagatataattgcagttcaattaaaatttagagcatgtttaaagattctc
actgtagaacttcgtacattatctactggctatgaaatagatggtggaaagttgcgttac
caactctaccactggcttgaaaaagaggtgatagctcttcagaggacttgtgactattgt
tcagatggtgaagacttacagcatgcatttggtgaaaatggagatgaatttggattaaat
ggagatgctgaagatttgcttcagcaaacgaaagtgaaacaactgagagaaaattttcag
gaaaaaagacagtggcttttgaaatatcagtcactcttgaggatgtttctgagttactgc
atacttcatgggtcccatggtggcggtcttgcctctgtgagaatggaattgattttgctt
ttacaagaatctcagcaggaaacctcagaaccaatatttcccagccctctgtcagagcag
acctcggtacccctcctctttgcctgtacagctagtgccaagacagtcgttgccaacccg
ttgctgcacctcagtaacctcacgcatgatattctgcatgccatcataaacttggattca
ccaccccatcctgacatccagagcagcaaagtatatgtaatgcatactttagcagcctca
ctttctgcttgtatttatcagtgcctttgtggtagtcataactacagttcatttcaaaca
aatcagtttactggaatgatgtatcagacagtcctgcttccccatcgacattctttgaaa
acaggaagcttagatgaagcaataactcctaatacatcaccagcacaatggccaggaatc
acttctctgattcgacttttgaattcttctggcgaggaagcccagtcagggcttacagtc
ttgctctgtgagattctcacagcagtgtatctgagtctcttcatccatggcttggcaaca
cattctagtaatgaactgtttcggatcgtggcccatcccctgaacgaaaaaatgtggtct
gctgtgtttggtggaggtgcacatgttcccagcaaagaacacacacactcaaaagcttta
cctgtttcttcgcttgtggaagaaggagagaaacagaacaaacgttttaggccatcaaaa
atttcttgcagagattctgccccaccgacctcttcctcatcagtaatcaaccaggagtca
ctgacagtccaagagaagttcattccaccagagctcagtatctgggactatttcatagcc
aagccttttctacccccttcccaaagtagagcagaatatgattcagaggagagtctggaa
agtgatgacgatgatgatgatgttttagcatcagatttccatctccaagaacattctaat
tcaaattcatatagttggtcattgatgcgcttggcaatggtgcagttagtgctcaacaat
ttgaagacgttctatccctttgcaggtcatgatcttgcagagcttccagttagctcacca
ctttgtcatgctgttctaaaaactcttcagtgttgggagcaagttcttctccgacgactc
gaaatccatggtgggccgcctcaaaactatattgcaagtcatacctctgaagagagtttg
tctgcaggtcctgcaattctccgccataaagctttgctggaacctacaaacactcctttc
aaatccaaacaccatctggcactgtctgtgaagagactttggcagtacttggtgaagcag
gaagaaattcaggaaacctttatcagaaatatattcacaaagaaaagatgtcttaatgag
tcattagaggacaactgtgaaaccatcaaaaattctatgatggaggagccaaacatcaat
aagatagaagcagacttgggatatcctggaggtaaagcaaggattattcacaaggaatct
gacatcattactgcctttgctgttaataaagcaaatagaaactgcatagcaattgcttca
agccatgatgttcaagaactggatgtttctggaattctggctacacagatctatacttgg
gtagatgatgatgctgaaatggaaagcaagggatcagaagagttcttggttatacatgct
cgtgatgatttaacagctgtgcagggtacaaccccatatacacacagcaatcccggcact
ccaatcaacatgccgtggctcggcagtacacagactggcagaggagcatctgtgatgatt
aagaaagccattaataatgtcagaagaatgacttctcatccaactcttccttactatctg
acaggagctcaagatggaagtgtcagaatgtttgaatggggccattctcaacaaataacc
tgttttcgatctggtggcaattcaagagttacgagaatgagatttaactaccaaggaaat
aagtttggaatagttgatgctgatggatatttaagtttatatcaaacaaactggaaatgt
tgcccagtaactggaagcatgcctaagccatacctgacttggcagtgtcacaacaaaaca
gccaatgattttgtctttgttagttcctcctctttgatagctacagccggtctttcaact
gacaataggaacatatgtttgtgggatactcttgtagcacctgccaatagtttagtccat
gcttttacatgccatgatagtggagctactgttttagcatatgctccaaaacatcagctg
ctaatatcaggtggcagaaaaggctttacatgtgcatttgaccttcggcaacgacagcag
aggcagcttttccagagccatgattctcctgttaaagccattgctattgatccgacggaa
gagtactttgttacaggatctgctgaaggcaacataaagatttggagtctgtctaccttt
aatcttctccacacttttatcaatgaacatgcccggcagtccattttcagaaatattgga
actggagtgatgcaaattgagacaggaccagcaaatcacattttttcatgtggagctgat
ggaacaatgaaaatgaggatactgccggatcagtttagcccattaaatgaagtgttgaaa
aatgatgtgaaatttatgctataa
DBGET
integrated database retrieval system
