Zalophus californianus (California sea lion): 113928840
Help
Entry
113928840 CDS
T07874
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zca03037
]
113928840 (NPHP4)
Cilium and associated proteins [BR:
zca03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
113928840 (NPHP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Shikimate_dh_N
Motif
Other DBs
NCBI-GeneID:
113928840
NCBI-ProteinID:
XP_027460799
UniProt:
A0A6J2DWS9
LinkDB
All DBs
Position
4:complement(3856028..3966084)
Genome browser
AA seq
1427 aa
AA seq
DB search
MNDWLRILDQNVLVPPHPQRARQPLKESKAFQCVLKCLDGPLIKQGVLEVLSEVGCHLRV
SLFDVTYRHFFGRTWKTAVRPAEQLPRQPSRIVFDEPVYFHTSLNHPNVVAVVEVVTEGR
KRDGSLQALSCGFGILRIFGNKLESPTSASQDKRLRLYHGTPRALLHPRLQDPVEENRHM
TLLESCSLQYVLRPHPLLEPVFHLLPENLLVSGLQHIPGLLPAHREKGDALRKPRLQKSV
TWYLDNLFFTLYPSLEKFEEELLELLISDHFREGGIPLDGSALEILERRLCVGVHNGLGF
VQRPQVVVLVPEMDVALTRSASFSRKVGSSSKASSGNQALVLRSRLRLPEMARHPAFAIV
FQLEYVFNSPSGVDGKAASVTSLSSMACMHMVRWAVWNPLLETGSGKVILPLQGGIRPNP
SHCLVYKVPPASMSSEEQVESGTVQFQYSLSPEGHLDTATGLIHSPEAERQPSRRPPTSP
ASPPAPQQGLAALQDSPVGPGLSLSQLAAPPRSPIQCCSATPSSRQPDSSERPLAQEQGL
PLEGRISHLEAQLNQASLVLGASVADQLRELPFTPVHVPIVVGAQARSSGSKLSRASMVL
LQASGFPEILDANKQPAEAVNPTDPIKFNPQKEESDCLQSNEIVLQFLAFSRVSQDCQGA
PWPKTVYFTFQFYRFPPVTTPRLQLVGLDETGRTCSGSLLHLLVLTGKDDSSEAGPPGFQ
LKYLVEPGFLKPGEQRWFTHYLAAQTLQIDVWDGDSLLLVGSAAVQMKQLLRQGRPAVQV
LHELEVVATEYEQDVVVSADVTRFGCVKPIGVYTVVKGWLHLTLANVGHVCEQRVRNSSS
LPPSRSRVISNDGASHFEGGSLLTRGGLRSVKNVVQAQKLADVDRELAAMLFTHTQHRSK
GPQGAGHEGDAVRRRKLERMRSVRLQESGGELSYRGASMLAQQSIRAQHARDLQVIAAYR
ERTKVESITSALSLAITTKHTIHVTLGTAEFFEFALRNPHNVQHTVTIEVDNPELSIIQD
SREWRYFKDTAKLHTPVEEDMFHLRGSLAPQIFLRPRETAHIPFRYQTFSVGQPALVQAS
AELRSEKGTDAGWPQKSSAMPTKHAKVVFRGSGGKPIAVLCLTVETQPHVVDQVFRFYHP
ELTFLKKAIRLPPWHTLRGAPVGSPGEEPPVHVRCSDPNVICETQNVGLGEPRDVFLKVA
SGPSPESKDFFVTVYADNWLATPVQIWQVHLHSLQRVDVSCVTGQQTRLSLVLRGTQSVR
RVQAFTSHPQELKTDPKGVFVLPPRGVQDLHVAVRPHRAGSRFIHLNLVDVDYHQLVASW
LVCLSCRPPLISKAFEITLAAGEGKGANKRITYTNPYPSQRTYHLHSDHPDLLQFREDCF
QVGGGETYTIGLRFAPRQSAGEEEILIYINDHEDKNEEAFCVKVTYQ
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaatgactggctcaggattttggatcagaacgtgctggtccctccccacccacagaga
gcacgccagcctttaaaggaatcgaaagcgtttcagtgtgtcctgaagtgtctcgatggg
ccactcattaagcagggagtgctggaggtgctctcggaggttggctgccatctgcgtgtg
tctctctttgacgtcacctaccgacactttttcgggaggacgtggaagactgcggtgagg
ccggcggaacagctccccaggcagccgtccaggatcgtcttcgatgagcctgtgtacttc
cacacgtccttaaaccaccctaatgtggtagctgtggtcgaggtggtcaccgaaggccgg
aagcgggacggctccctccaggctctgtcgtgtgggtttggaattcttcggatcttcggc
aacaagctggaatctcctacctctgcctcccaggacaagcggttgaggctgtatcatggc
accccccgagccctcctgcacccgcggctccaggaccccgtcgaagaaaacagacacatg
accctgcttgagagctgtagcctgcagtatgtcctgaggccccacccgctcctggagcct
gtgttccaccttcttcccgagaaccttctggtgtctggtctgcagcacatacccggcctc
cttccagctcacagagagaagggggacgccctccgaaagcctcgccttcagaagtctgtc
acgtggtacttggacaatttattcttcacgctgtatccttcccttgagaagtttgaggag
gagcttctggaactccttatcagcgatcacttccgggaggggggcattccgctagatggc
agcgcgctggagatcttggagcgccgcctgtgcgtgggcgtgcacaatggtctgggcttc
gtgcagaggccgcaggtggtggtgctggtgcccgagatggacgtggccttgacgcgctct
gccagtttcagcaggaaagttggctcctcctcgaaggccagctctggaaaccaggctctg
gttttgagaagccgcctccgactccctgagatggcccgtcaccctgcgtttgccatcgtc
tttcagctggagtatgtgttcaacagcccttccggagtggacggcaaggcagcttcggtt
acctctctgtccagcatggcgtgtatgcacatggttcgctgggctgtttggaaccccttg
ctggaaaccggctccgggaaggtgatcttacctctgcagggtgggatccggcccaacccc
tcacactgtctggtctataaagtacccccggccagcatgagctccgaagagcaggtggag
tcggggaccgtccagttccagtactcactgagccccgagggacacctggatacagccacg
gggctcatccacagccctgaggcagagcggcagccttccaggaggccacccacatcccct
gcaagcccgccagcgccgcagcaggggctcgctgccctccaggactcgcctgtgggacca
gggctgtcgctctcccagctggcggctcccccacggtctcccattcagtgctgctcggcc
acaccgtcctcacgacaacccgacagctctgagcgccccctggcccaggagcaggggctc
cccttggagggcaggatctctcacctggaggcccagctgaaccaggcgtccttggtcctg
ggagcctctgttgcggatcagctgcgggagctacctttcacgccggtgcatgtcccgatt
gtcgtgggagcccaggccaggagctctggaagtaagctctcgcgagcctcgatggtgctc
ctgcaggcttccggctttcccgagattctggatgccaataagcaaccagctgaggctgta
aatcctacagatcccattaaattcaaccctcaaaaggaagaatcagattgtctacaaagc
aacgaaatagtgctgcagttcctcgccttcagcagagtgtcccaggactgccagggagca
ccgtggccaaagaccgtgtatttcaccttccagttctaccgcttcccgcctgtgaccacg
ccacgcctgcagctggtcgggctggacgagacgggcagaacgtgctctggttccctgttg
cacctcctcgttctcactggcaaggacgactcctctgaagctgggcctcctggctttcag
ctcaagtacctggtggagcctgggttcctgaaacccggagaacaacgctggttcacccac
tacctggccgcccagaccctacagatcgacgtctgggatggagactccttgctcctcgtg
ggatctgcagccgtccagatgaagcagctcctccgccaaggtcggccggctgtgcaggtc
ctgcatgagcttgaggtcgtggcgaccgaatatgaacaggatgtggtggtgagtgcagat
gtgacccggtttggctgtgtcaagcccattggtgtctacacggtggtgaaaggctggctg
catctgacgctggccaatgtgggtcacgtgtgtgagcagagagtgagaaattccagctca
ttgccaccttccaggtcccgggtcatctcgaatgatggagccagccacttcgagggaggc
agtctcctcacgcgcgggggtctgagatcagtaaaaaatgtggtccaagcacagaagctg
gctgacgtggaccgtgagctggccgccatgctgttcacgcacacacagcacaggagcaag
gggccccagggcgctggccacgagggggacgctgtccgcaggcgcaagctggagcggatg
aggtccgtgcgccttcaggagtccggaggagagctcagctaccggggcgccagcatgttg
gctcagcagagcatccgtgcacaacacgcacgtgacctgcaggtcattgctgcctatcgg
gagcgcacgaaggtagagagcatcacgagcgcactgagcctggccatcaccaccaagcac
acgatccacgtcacactgggcactgccgagttcttcgaatttgccctcaggaacccccac
aacgtgcagcacacagtgaccatcgaggtggacaatcccgagctcagcatcatccaggac
agtcgggagtggaggtacttcaaagacacagccaagctgcacacgccggtggaggaggat
atgttccatctgcggggcagccttgctcctcagatcttcctgcgcccgcgggagaccgcc
cacatccccttcagataccagaccttctctgtggggcagccggccttggtgcaggcctct
gctgagctgagatctgagaagggcacagacgccgggtggccccagaagtccagtgcaatg
cccactaagcatgccaaggtcgtgttcaggggcagtggcggcaagcccatcgctgtgctc
tgcctcaccgtggagacccagccccacgtggtggaccaggtcttccgcttctaccacccg
gagctcaccttcctgaagaaggccatccgcctgcctccctggcacacacttcgaggtgct
cccgtgggaagccctggtgaggaacccccagtccacgtccgatgtagcgaccccaacgtc
atctgtgagacccagaatgtgggccttggggagccacgggacgtgttcctgaaggtggct
agtgggccaagcccggagagcaaagacttctttgtcactgtttacgcggataactggctg
gcaacacccgtccagatatggcaggtccaccttcactccttgcagcgcgtggacgtctcc
tgtgtcacaggccagcagacccgcctgtcccttgtccttcgggggacacagtcggttcgg
agagtgcaggctttcacctcgcacccccaggagctgaagacggaccccaagggtgtgttt
gtgctgccacctcgcggggtgcaggatctgcatgttgctgtgaggccccatagggcgggg
agccggttcatccaccttaacctggttgacgtggactaccaccagctggtggcctcgtgg
ctcgtgtgcctctcctgccgtccacctctcatttccaaggctttcgagatcacgttggct
gcgggggaaggcaaaggcgccaacaagcggatcacctacaccaacccctacccctcccag
aggacctaccacctgcacagcgaccaccctgacctgctgcagttcagggaggactgcttc
caggttgggggaggagagacctacaccatcggcctgcggtttgcacctcgtcagagcgcc
ggggaggaggagatcctgatttacatcaatgaccatgaagataaaaacgaagaggcattc
tgtgtgaaggtcacctaccagtaa
DBGET
integrated database retrieval system
