Zalophus californianus (California sea lion): 113929240
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Entry
113929240 CDS
T07874
Symbol
TARS1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113929240 (TARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zca01007
]
113929240 (TARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zca03016
]
113929240 (TARS1)
Enzymes [BR:
zca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
113929240 (TARS1)
Amino acid related enzymes [BR:
zca01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
113929240 (TARS1)
Transfer RNA biogenesis [BR:
zca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113929240 (TARS1)
Prokaryotic type
113929240 (TARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
113929240
NCBI-ProteinID:
XP_027461781
UniProt:
A0A6J2E104
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All DBs
Position
5:complement(127787766..127813663)
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AA seq
723 aa
AA seq
DB search
MSEEKDGSPSGKMGGEEKSVGAGEEKRKEGGKKKNKEGSGDGGRAELNPWPEYINTRLEM
YNKLKAEHDSILAEKAEKDSKLIKVTLPDGKQVNAESWKTTPYQIACGISQGLADSTVIA
KVNQVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIE
NGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLEMFKYNKFKCRIL
NEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMETLQRIYGI
SFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFI
RSEYRKRGFQEVVTPNIYNSRLWMTSGHWQHYSENMFSFEVEKELFALKPMNCPGHCLMF
DHRPRSWRELPLRIADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCL
DFLHTVYSIFGFSFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWELNPGDGAFY
GPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERM
IAILTENFGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMVDVDLDPGCTLNK
KIRNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTIPETIERLQQLKQSRSKQAE
EEF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagagaaggacgggagcccttcagggaagatgggaggcgaggagaagtcggta
ggtgctggagaggagaagcgaaaggaaggaggcaagaagaagaacaaagaaggatctgga
gacggaggccgagcagagttgaatccttggcctgaatatattaacacacgtcttgagatg
tataataaactaaaagcagaacatgattccattctggcagagaaggcagaaaaagatagc
aagctgattaaagtcactctgcctgatggtaaacaggtcaatgcagaatcctggaaaact
acaccatatcaaattgcttgtggaattagtcaaggcctggctgacagcaccgttattgct
aaagtgaatcaagttgtttgggacctagaccgtcctctggaggaagattgtaccttggag
cttctcaaatttgaggatgaggaagctcaagcggtatattggcactcaagcgctcacatc
atgggtgaagccatggaaagagtctatggtggatgtttatgttatggtccaccaatagaa
aatggattctattatgacatgtaccttgaagaagggggtgtgtccagcaatgatttctct
tctttggaggctttatgtaagaaaatcattaaagaaaaacaagcttttgaaagattggaa
gtaaagaaagaaactttactagaaatgtttaagtacaataagttcaaatgccggatactg
aatgaaaaagtgaatactccaactaccacagtctataggtgtggccccttgatagatctc
tgtcggggtcctcatgtcagacacactggcaaaattaagactttgaaaatacacaaaaat
tcctccacatactgggaaggcaaagcagatatggagactctccagagaatttatggcatt
tcattcccagatcctaaaatgttgaaagaatgggagaagttccaagaggaagctaaaaac
cgagatcataggaaaattgggagggaccaagaactatatttctttcatgaactcagccct
ggaagttgctttttcctgccgaagggagcatacatttataatacacttattgaatttatc
aggagtgaatataggaaacgaggattccaggaggtggtcaccccaaacatctacaacagc
cgactctggatgacgtcaggccactggcagcactatagtgagaacatgttctcctttgag
gtggagaaggagctctttgctctgaaacccatgaactgccctggacactgccttatgttt
gatcatcggccaagatcctggcgagagttgcctctgcggatagctgattttggggtactt
cataggaatgagttgtcgggagcactcacaggacttacacgggtacgaagattccaacag
gatgatgctcacatattctgtgccatagagcagattgaggatgaaataaaaggttgtttg
gattttctgcatacagtatatagcatatttggattttcttttaaactgaacctgtctact
cgcccagaaaaattccttggagatattgaagtatggaatcaagctgagaaacaacttgaa
aacagtctgaatgaatttggtgagaagtgggagttaaatcctggagatggagctttttat
ggtccaaagattgatatacagattaaggatgcaattggtcggtaccaccaatgtgcaaca
atccagttggattttcagttgcccatcagatttaatctcacttttgtaagccatgatggt
gatgataagaaaaggccagtgattgtccatagagccatcttggggtcagtggaaagaatg
attgctatcctcactgaaaactttggcggcaaatggcccttctggctgtctcctcgccag
gtaatggtagttccagtgggaccaacatgtgatgaatatgcccaaaaggtacggcaacaa
ttccatgatgctaaattcatggtggacgttgatctggatccaggctgtacattaaataag
aagatcagaaacgcacagttagcacaatataacttcatcctagttattggtgaaaaagag
aaagccagtggcaccgttaatatccgtacaagagataataaggtacatggagagcgtacg
attcctgaaaccatcgagcggctacagcagctcaagcagtcccgcagcaaacaagcagaa
gaagaattttaa
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