Zalophus californianus (California sea lion): 113929474
Help
Entry
113929474 CDS
T07874
Symbol
ARHGEF28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
113929474 (ARHGEF28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113929474 (ARHGEF28)
Membrane trafficking [BR:
zca04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113929474 (ARHGEF28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
PH_13
SOS1_NGEF_PH
PHD
Ank_2
Motif
Other DBs
NCBI-GeneID:
113929474
NCBI-ProteinID:
XP_027462210
UniProt:
A0A6J2E062
LinkDB
All DBs
Position
5:54910165..55231755
Genome browser
AA seq
1713 aa
AA seq
DB search
MISQLKSHNAEAMELSCSEVPLYGQMTIYAKFGKNVYLPKDAEFYFIYNGSHQRHIMIAE
RAEDNVLQSSIPGHGLQETVMVSVCLCSEGYSPVTMGSGSVTYVDNMACRLARLLVTQAD
RLTSDSHQTLLTPFALTVGALPALDEELVLALTHLELPLEWTVLGNSSLEVSLCRESLLH
LAMRWGLPKLSHFLLCLPGGVQALSLCNKEGATPLDLALRAGHSKLVEDITHFQGRHSPG
FSRVQLSEQAFLKYIHSSETLTLTLNHTAEHLLEADIKLFRKYFWDRAFLLKVLEDQEAR
PEERQDMPSSAAETEEEIKNLATSRSSPEKEDVKCVENLVVQPNDHEDQDSLDSDHSFDV
FKKSKHPPTFFAAGRLSGVLNGGDEVYANCMVIDQVGDLDINYINIEGITTNACPESMGS
TLGPQNCKHIIAAETSHGKYPLSENKEVTSNTEAQQSFPSPSSSYASNFNLSFGHHGFEK
EQSHLKKRSSSLDALDADSEGEGHSERSHICYTPVSQSSSRTGIPSGDELDSFETTTEPD
FSISRTESLSLSSNLQLKESLFSGVRSRSYSCSSPKISLGKARLVRDFTVCNSSEEQRAY
SLPEPPREKRIQEEEWDKYIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKSKDVKDK
EKLSRHQFVPGTFSGVLQCSVCDKTLLGKESFQCSNCNANVHKGCKDAAPPCTKKFQEKY
NKNKPQTILGNSSLRDIPQPGPWLHPSSSMPIGLPTGRKEASTQAHPLSRSVPGTALERR
SGPTLECESDGNTWRSRSHSDELLQSMGSSPSTESFLVEDVVDSSLWSDLSSDAQELEAE
SWSLVVDPSFCSKQEKDVIKRQDVIFELMQTEMHHIQTLLIMSEIFRKGMKEELQLDHST
VDKIFPCLDELLEIHRHFFYSMKERRQESCAGDDRNFIINRIGDILVQQFSEENANQMKK
IYGEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVL
VERILQYTKERSEEHKDLCKALCLIKDMIAAVDLKVSEYEKNQKWLEILNKIENKTYTKL
KNGHVFRKQALISKERTLLHDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAV
DQKPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVES
CPEEEGGRTSESDEERRKAEARVAKIQQCQEILSNQDQQICTYLEEKLHIYAELGELSGF
EDVHLEPHLLIKPDPGEPPQAASLLAAALKEAESLQVAVKASQMGDACQSSGEGSGESAL
MDMHRAPEEPGSSPASLVTEGTGGRGCWDVDPGTQGVGTGLAVSDAGEKVEYRSFPVSSQ
SEIIQAIQNLTQLLYSLQAALTIQDSHIRVHRLLLPQQERLSAGASFRGSPFQDQEKFRN
LEKQREGLADIHKLQYQLQQDQRRWLRQCDQQQREQEARAGRLQEREAECQSQEGLLLRN
RGELDQQLQEYQQNLERLREGQRLVERERERMRGQQSLLCGWKHGRQSSLPAAFAPRSTE
VMELNRSESLCHENSFFVNEALVQMSLNSYNNSTLSGVQDATYPQNIANSDLVRTSENQV
ELQLDVCQPLDVNHELWTAAGSCHQIPPLHPSSKDSCKNDLDISQTEFPTPHDSNPHGSQ
LQTFMAEAKLNLQTLTRQDGETGDGAEENIVYL
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgatatctcaattgaaatcacataatgcagaagccatggagttgagctgcagcgaagta
cctctttacgggcagatgaccatctatgcaaagtttggcaaaaatgtttatcttcctaaa
gatgccgaattttactttatttacaatggatctcatcagagacacatcatgattgccgaa
cgcgctgaggataatgttctccaatccagcattccaggccatgggcttcaggagacggtg
atggtatctgtgtgcctctgctcagaaggttactccccggtgaccatgggctccggctca
gtgacctacgtggacaacatggcttgccggctggctcgtttgctggtcactcaagctgat
cgcctcaccagtgatagtcatcagaccttgctgactccatttgccctaacggtgggagcc
ctgcctgcattggacgaggagctcgtgctggctctgacccatctggagttgcctcttgag
tggactgtcttgggaaattcttcacttgaagtttctttatgcagagagtctcttctacac
ctggctatgagatggggcttacctaagctctctcatttcctgttgtgcctccctggggga
gttcaggctttgtctttatgcaacaaagaaggtgccacaccattagatttagctttacga
gccggacactccaagctggttgaagacatcacacatttccagggcagacattctccaggc
ttctcccgagtgcagctcagcgaacaagctttcctcaagtatattcactcatcagagaca
ctgaccctaacgctgaaccacacagccgagcatttgttggaggcagatattaaactcttc
aggaaatacttttgggacagagcctttctcctcaaggttcttgaagatcaagaagccagg
ccagaggaaagacaagacatgccatccagtgctgcagaaactgaagaagagattaagaat
ttggcgaccagccgatcatcacctgagaaggaggatgtaaagtgtgtggaaaacctggtg
gttcaaccgaatgaccatgaagaccaggacagtctagattcggatcactcttttgatgtc
ttcaaaaaatccaagcatcccccaacattctttgctgcaggccgactctctggtgtgctg
aatggaggtgatgaagtttatgctaactgtatggtgatagatcaggttggtgatttggat
attaactacattaatatagaaggaatcactacaaacgcctgccctgaatccatgggttct
actctgggacctcagaactgcaagcatatcattgctgctgaaaccagccatggaaagtac
ccactaagtgagaacaaggaagtgacctcaaatactgaagctcagcagtccttcccgtca
ccatctagttcatatgcttccaattttaatctttcctttggtcatcatggatttgaaaag
gaacaaagtcatctgaagaaaagaagttctagcctcgatgccctggatgccgacagtgaa
ggggaagggcattctgagcggtcacacatttgctacactccagtgtctcagagttcctca
agaactgggattcctagtggggatgaactggactcttttgagaccaccactgaaccagat
tttagtatctccaggacagagtccctttctttatcaagtaacctgcagttgaaggaatcc
ttgttttctggagtccgctcacgttcttactcctgctcatcacccaaaatttctttagga
aaagctcggttggtgcgtgattttacagtgtgcaattctagtgaagagcaaagagcttac
agcttaccggaaccaccaagagaaaaaagaattcaggaagaagaatgggataaatacatt
atacctgccaagtcagagtctgaaaaatacaaagtgagccgaactttcagcttcctcatg
aataggatgacaagccctcggaataaatctaagacaaaaagcaaggatgtcaaagacaaa
gagaaactgagccgccatcagtttgtccctggaacattctctggggttctacagtgttcg
gtttgtgataaaacgctcctggggaaggagtcattccagtgttccaactgtaatgcaaac
gtccacaagggttgtaaggacgccgcccctccgtgtaccaagaaattccaagagaaatac
aacaagaacaaaccgcagaccatccttggaaactcttcattgcgagacatcccacaacct
ggtccctggttgcacccttcttcctccatgcctattggattgcccaccgggagaaaagaa
gcttccacacaggcccatcctttgtctagaagtgttccgggcactgccttggaaagaagg
tcggggccaaccctggagtgtgagagtgacgggaacacctggagaagcaggtctcattcc
gatgagctgctacagtccatgggctcttctccctccacggagtccttcttagtggaagat
gtcgtggattcttctctgtggagtgacctcagcagtgacgcccaggagttggaagcagaa
tcttggagtctggtggtggatccctcattttgcagtaagcaggagaaagatgtcatcaaa
agacaagatgtcattttcgagctgatgcaaacagagatgcatcatatccagaccctgctc
atcatgtctgagatcttcaggaaaggcatgaaggaggagctgcagcttgatcacagcacc
gtggataaaatcttcccctgcttagatgagttacttgaaatccataggcatttcttttat
agtatgaaggagcgaaggcaggagtcctgtgctggtgatgacaggaatttcatcatcaac
cgaattggagatattctagtgcagcagttttcagaagaaaatgcaaatcaaatgaagaaa
atatatggagaattctgcagccatcacaaagaagctgttagcctctttaaagaactccag
caaaataaaaagtttcagaattttattaagcttcgaaatagtaatcttctggctcgacgc
cgaggaattccagaatgcattctgctagtcactcagcgcatcacaaaataccctgtcctg
gtggaaaggattttgcagtacacaaaggaaagaagtgaagaacataaagacttgtgcaaa
gccctgtgcttaattaaagacatgattgcagcagtggatttaaaagtcagcgagtatgag
aaaaatcaaaaatggcttgagatcctaaataagatcgaaaacaaaacctacacaaagctc
aaaaatggccatgtgtttaggaagcaagcactgataagtaaagaaaggactctcttacat
gatggccttgtttactggaaaactgctacgggtcgattcaaagatatcctggctctactt
ctaactgacgtgctgctctttttacaagaaaaagatcagaaatatatctttgctgctgtt
gatcagaagccatcagttatttcccttcagaagcttattgctagagaagttgctaatgag
gaaagaggcatgtttctaatcagtgcttcatctgctggtcctgagatgtatgaaattcat
accaactccaaggaggaacgaaataactggatgagacgaatccaacaggcagtagaaagt
tgcccagaagaagaagggggaaggacaagcgaatctgatgaagagaggcggaaagctgaa
gcaagagtggccaaaattcagcaatgtcaagaaatactcagtaaccaagaccaacaaatt
tgcacatatttggaggagaagctgcatatctatgctgaacttggagaattgagtggattt
gaggatgtgcatctagagccccacctcctcattaaacctgacccaggagagcctccccag
gcagcctcattactagcagcagcactgaaagaagctgagagcctccaagttgcagtgaag
gcctcacaaatgggcgatgcctgtcagtcatccggggaaggttctggagaatctgccttg
atggatatgcacagggcccccgaagagccaggatcgtctccagcttcactagtcacagaa
gggacaggaggaagaggctgttgggatgtggaccctggcacccagggtgtgggaaccggc
ttggcggtctctgatgcaggggagaaggtggaatacagaagcttcccggtttcttcacag
tcagagattatacaagcaatacagaatttaacccagctcctctatagccttcaggccgcc
ttgaccatccaggatagccacatccgggtccacaggctgcttctcccgcagcaggagaga
ctctccgccggcgcgtccttccgagggagccccttccaggaccaggagaagttccgcaac
ctggagaagcagcgggaggggctggccgacatccacaagctgcaataccagttgcagcag
gaccagcggcgctggctccgccagtgcgaccagcagcagcgggaacaggaggccagggcc
ggccggctgcaggagcgggaggccgagtgccagtcacaggaggggctgctgctcaggaac
cgcggggagctggaccagcagctccaggagtaccagcagaacctggagcggctgagggag
ggccagcgcctggtggagagggaaagggagaggatgcggggccagcagagcctgctgtgt
ggttggaaacacggtcggcagagtagccttcccgcagcgtttgctccaagaagcacagag
gtaatggaacttaatcgatctgagagtttgtgtcatgaaaactcattcttcgttaatgaa
gctttagtacaaatgtcgcttaactcttacaacaattcgactctatcaggtgtccaggat
gccacttatccccagaatatagctaattctgatttggtaaggactagtgaaaatcaagta
gagctccagttggacgtttgtcagcccttggatgtcaaccatgaactgtggacagccgct
gggtcctgtcatcagataccccctctccacccaagcagcaaggattcttgtaaaaatgat
ttggacatctctcagactgagttcccaaccccccatgactccaatccacatggctctcag
ctgcagacatttatggcagaagcaaagctaaatctacagacactgaccagacaagatggg
gaaactggagatggagctgaagaaaatattgtttacctctaa
DBGET
integrated database retrieval system
