Zalophus californianus (California sea lion): 113929633
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Entry
113929633 CDS
T07874
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113929633 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zca03400
]
113929633 (UIMC1)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
113929633 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
zf-WRNIP1_ubi
UIM_2
Motif
Other DBs
NCBI-GeneID:
113929633
NCBI-ProteinID:
XP_027462469
UniProt:
A0A6J2E172
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Position
5:89359532..89471743
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AA seq
722 aa
AA seq
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MPRRKKKVKEASEAQNLEKKDAETASSVNLKRKRRLEDAFIVISDSDGEEPKEENGLQKM
KTKQSNRTKCLAKRKIAQMTEEEQFALALKMSEQEAREMNSQEEEEEELLRKAIAESLNS
CRPSDASATRSRPLATGPSSQSHQEKTTDSGTTEGIWQLVPPSLFKGSHISQGNEAEERE
EPWDHTENTEEEPVFGSSGSWDQSSQPVFENENVKCFDRCTGHLAEHTQCGKPQESTGRG
CVFHKAAQGRGDTSRHSLPTPADATGLQDVGGTVHYFWGIPFCPAGVDPNQYTKVILCQL
EVYQKSLKMAQRQLFKKKGFGEPVLPRPPSLIQNECGQGDQASEKNEGISEDMGDEDKEE
RQESRASVWHSKTKDFQESPIKSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPAS
QSIAALTSKRSSVLMPESSAEEITVCPETQLSSPETFDLEKEVSPGSREILDEVRIIMAD
KEVGNRGNAEKEIPISTVSSSTQVSCPLCDQGFPLTKIELHAMYCNGLIGQDTVLTRRQK
EAKSKSDSGTAVQTSLDIDKNEKCYLCKSLVPFREYQSHVESCLQLARGDQGAGPEECGK
VCSAMEEKQQQRLRNPKEKNRSEGWLLSLLEQSEHKTADAEIKTKSSETGSFRVSSPGME
EAGCSKEIQSSLPHLDLNESPIKSFVSISEATDCLVDFKKQLTVRPGSRTRTKTGRGRRR
KP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccacggagaaagaaaaaagttaaagaagcttctgaagctcagaacctggagaagaaa
gatgcagaaactgccagttctgtcaatctgaagaggaaacgtagacttgaagatgcattc
attgtgatatctgatagtgatggagaggaaccaaaggaagagaatggattgcagaaaatg
aagacaaaacagtcgaatagaacaaagtgtttggctaaaagaaaaattgcacaaatgaca
gaagaggagcagtttgctctggctctcaaaatgagtgagcaggaagctagggagatgaac
agccaggaggaggaagaagaggagctcttgaggaaagccattgcagaaagcctgaatagt
tgccggccttctgatgcttctgctaccagatctcgacctctggccactggaccatcttca
cagtcccaccaagagaaaaccacagactctgggaccacagaaggcatatggcagctggta
cctccatcactgtttaaaggctcacatatcagtcagggaaacgaggctgaggaaagagag
gagccttgggaccacactgaaaacactgaagaggagccggtctttggcagctcaggaagc
tgggatcagtcaagccagccagtgtttgagaatgagaacgttaaatgttttgacagatgt
actggccacttggctgagcacacacagtgtgggaagccacaggaaagtactgggaggggt
tgtgtttttcacaaagctgcccagggtaggggggacacatctaggcactctctgcctacc
ccagcagatgccacaggtctccaggatgttgggggcactgtgcactacttctggggtatt
ccattctgccctgctggagtagatcctaaccaatataccaaggtcattctctgccagttg
gaggtttatcaaaagagcctaaaaatggctcagaggcagctctttaaaaaaaaaggtttt
ggggaaccagtgttacctagacctccttctctgatccagaatgaatgtggccaaggagat
caggctagtgaaaaaaatgaaggcatctcagaagatatgggagatgaagacaaagaggag
aggcaggaatctagggcatctgtctggcactcaaaaaccaaggatttccaagaaagccca
attaaaagcttgaaagagaaacttttgttggaggaagaaccaacaaccagtcatggtcag
tcttcccaagggctatttgtcgaagaaacttctgaagaaggaaactctgtacctgcctca
caaagcattgctgctttgaccagtaagagaagctctgtccttatgccagagagttctgca
gaggaaatcactgtgtgtcctgagacacagctaagttctcctgaaacgtttgaccttgaa
aaagaagtctctccaggtagcagagagatcctggatgaagtaagaataataatggcagat
aaggaggttggtaacaggggaaatgctgagaaggaaatacctatttctacagtctcatcc
agtacccaggtgtcctgcccactatgtgaccaaggcttcccactcacaaagattgagcta
catgccatgtactgcaatgggctgatagggcaagacacagtgttgactcggagacaaaaa
gaggccaagagcaagagtgacagtgggacagctgtccagacttccctagacattgacaaa
aatgagaaatgttatctctgtaaatccctggtcccattcagagagtaccagagtcatgta
gagtcctgtctccagcttgcaaggggtgaccaaggagctgggcctgaagagtgtgggaag
gtatgctcagctatggaggagaagcagcagcagcggctgaggaacccaaaggaaaaaaac
cgcagtgaaggctggctcctcagtctcttggaacagtctgagcacaagactgcagatgca
gaaataaagaccaagtcttcagaaacaggaagcttcagggtgtcctcgccagggatggaa
gaggcaggctgcagcaaagagatacagagttcccttccacatcttgacttaaacgagtct
cccatcaagtcttttgtttccatttcagaagccacagattgcttagtggactttaaaaag
caacttactgtccggccaggtagccggacacggaccaaaacaggcagaggaagaaggaga
aaaccctga
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