KEGG   Zalophus californianus (California sea lion): 113930489
Entry
113930489         CDS       T07874                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 2-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca03082  ATP-dependent chromatin remodeling
zca03083  Polycomb repressive complex
zca04110  Cell cycle
zca04213  Longevity regulating pathway - multiple species
zca04330  Notch signaling pathway
zca04350  TGF-beta signaling pathway
zca04613  Neutrophil extracellular trap formation
zca04919  Thyroid hormone signaling pathway
zca05016  Huntington disease
zca05031  Amphetamine addiction
zca05034  Alcoholism
zca05165  Human papillomavirus infection
zca05169  Epstein-Barr virus infection
zca05200  Pathways in cancer
zca05202  Transcriptional misregulation in cancer
zca05203  Viral carcinogenesis
zca05206  MicroRNAs in cancer
zca05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:zca00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113930489
   03083 Polycomb repressive complex
    113930489
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    113930489
   04350 TGF-beta signaling pathway
    113930489
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    113930489
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    113930489
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    113930489
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    113930489
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    113930489
   05202 Transcriptional misregulation in cancer
    113930489
   05206 MicroRNAs in cancer
    113930489
   05203 Viral carcinogenesis
    113930489
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    113930489
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    113930489
   05165 Human papillomavirus infection
    113930489
  09164 Neurodegenerative disease
   05016 Huntington disease
    113930489
  09165 Substance dependence
   05031 Amphetamine addiction
    113930489
   05034 Alcoholism
    113930489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zca03036]
    113930489
Enzymes [BR:zca01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     113930489
Chromosome and associated proteins [BR:zca03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     113930489
   HDAC complexes
    Sin3A-HDAC complex
     113930489
    BRAF-HDAC complex
     113930489
    REST complex
     113930489
    SHIP complex
     113930489
    MiDAC complex
     113930489
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     113930489
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    113930489
  Chromatin remodeling factors
   NuRD complex
    113930489
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 113930489
NCBI-ProteinID: XP_035581322
UniProt: A0A6P9FIT6
LinkDB
Position
X:31664801..31666736
AA seq 546 aa
MESSRRPFLSSLRPAVPWGTATPTFAPALFSPRRAAAAPAAASAAGGARAWRQRWPEPRA
YSQGGGKKKFCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA
EEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLXEFCQLSTGGSVAGA
VKLNRQQTDMAVNWAGGLHHAKKSEASGFCYINDIVLAILELLKYHQRVLYIDIDIHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGGGKGKYYAVNFPMRDGIDDESYGQIF
KPIISKVMEMYQPSAVVLQCGADLLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGG
EYTIRNVARCWTXETAVALDCEIPSELPYNDYFEYFGPDFRLHISPSNMTNQNTPEYMEK
IKQRLFENLRMLPHAPGIQMQAIPEDAVHEDSRDEDGEDPDKRISIRASDKWIACDEEFS
DSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDTKGAKP
EQLSNP
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggagtcctcccggcgtcccttcctctcctccctccggccagccgttccttgggggact
gccacccccaccttcgccccagcccttttctctccccgccgagccgcggcggcaccagca
gcagcttcagcagcaggaggagccagagcctggaggcagcggtggccggagcccagggcg
tatagtcaaggaggcggcaagaagaaattctgctactattacgatggtgatattggaaat
tattattatggccagggtcatcccatgaaacctcatagaatccgcatgacccataacttg
ctgctaaattatggcttatatagaaaaatggaaatatataggccccataaagccactgct
gaagaaatgacaaaataccacagtgatgagtacatcaaatttctccgttcaataagacca
gataacatgtctgagtatagtaagcagatgcagagatttaatgttggagaggattgtcca
gtgtttgatggactcnntgagttttgtcagctttcaactggtggctcagttgctggggct
gtgaagttaaaccgacaacaaactgatatggctgttaactgggctggaggattacatcat
gccaagaaatcagaagcatcaggattctgttacattaatgatattgtacttgccatcctt
gaattactaaagtatcatcagagagtcctatatattgatattgatatccatcatggtgat
ggtgttgaagaagctttttatacgacagatcgtgtaatgactgtatcattccataaatac
ggggaatactttcctggaacaggagacttgagggatattggtggaggaaaaggcaaatac
tatgccgtcaattttccaatgagagatggtatagatgatgagtcctatgggcagatattt
aagcctattatctcaaaggtgatggagatgtatcaacctagtgctgtggtgctacagtgt
ggagcagacttactatctggtgataggcttggttgcttcaatctgacagtcaaaggtcat
gctaaatgtgtagaagttgtgaaaactttcaatttaccattactgatgcttgggggaggt
gaatacacaattcgtaatgttgctcgatgttggacataagagactgcagttgcccttgat
tgtgagattcccagtgaattgccatataatgattactttgagtattttggcccggacttc
agactgcatattagtccttcaaacatgacaaaccagaacactccagaatacatggaaaag
ataaaacagcgtttatttgaaaatttacgcatgttacctcatgcacctggcatccagatg
caagctattccagaagatgctgttcatgaagacagcagagatgaagatggagaagatcca
gacaagagaatttctattcgagcatcggacaaatggatagcttgtgatgaagaattctca
gactctgaggatgaaggagaaggaggacgtagaaatgtggctgatcataagaaaggagca
aagaaagctagaattgaggaagacaagaaggaaacagaggacaaaaaagcagatgttaag
gaagaagataaatccaaggacagtagtggtgaaaaaacagataccaagggagccaaacca
gaacagctcagcaacccttga

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