Zalophus californianus (California sea lion): 113930667
Help
Entry
113930667 CDS
T07874
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03083
Polycomb repressive complex
zca04980
Cobalamin transport and metabolism
zca05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113930667 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
113930667 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113930667 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zca01009
]
113930667 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113930667 (HCFC1)
03029 Mitochondrial biogenesis [BR:
zca03029
]
113930667 (HCFC1)
Protein phosphatases and associated proteins [BR:
zca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113930667 (HCFC1)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
113930667 (HCFC1)
HMT complexes
COMPASS/SET1 complex
113930667 (HCFC1)
MLL-HCF complex
113930667 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
113930667 (HCFC1)
Mitochondrial biogenesis [BR:
zca03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113930667 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
113930667
NCBI-ProteinID:
XP_027463818
EnsemblRapid:
ENSZCAG00025023909
UniProt:
A0A6J2EDQ1
LinkDB
All DBs
Position
X:1672247..1697616
Genome browser
AA seq
2096 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAATAPPTTTTIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSS
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGEVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGQPQPAQVQFVCDKQEAAASLVTSTVGQQNGSVVRVCSNPPC
ETHETGTTNTATTATSNMAGQRPCSNPPRETHETGTTSTATTAVAGQQRDARRACVAGPA
PAVVRVSVAAGVLEGAQGPGKPLCQTRQTSVTSTTMTVMATGAAPCAAGPLLGPGLAVGA
GGRGGTAFVQLAPMSGQLRPGVLGGKDGPVAGLSPLVSVGRPLEAHHTHTTNTPTTVRSA
MGAGEPGEARGTPTPTYESSPGTTVTVTALEALLCPSASVSQVCSNPPCETHETGTTNTA
TTSNAGSAQRVCSNPPCETHETGTTHTPTTATSSGGAGQPEGGQQPPAGRPCETHQTTST
GTTMSVSVGALLPDTVPSHRTLESGLEVAAPATVTPQAGASLLAPFPTQRVCSNPPCETH
ETGTTHTATTVTANMSSNQDPPPAASDQGEVESTQGDSVNITSSSAVTTTVSSTLTRAVT
TVTQSTPVPGPSVPKISSMTEATPGALTTEVPIPATITVTIANTETSDMPFSAVDILQPP
EELQASPGPRQQLPPRQLLQPASTPLMGESAEVLSASQTPELQAAVDLSSTGDPSSGQEP
ASSAVVATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAA
AQAAATEEAQALAIQAVLQAAQQAVMAGTGEPMDTAEAAAAVTQAELGHLSAEGQEGQAT
TIPIVLTQQELAALVQQQQQLQEAQAQQQHHHLPTEALAPADSLNDPTIESNCLSELAAA
VPSTVALLPSTATESLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPDLPP
PPSKAPVKKENQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDSGTVPDYNQLKKQELQPG
TAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGK
IIEYSVYLAIQSSQAGGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAI
IFRIAARNEKGYGPATQVRWLQETSKDSSGAKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgtcgcccgccaactcgccagcggttctcctgcagccccgctggaag
cgagtggtgggctggtcgggtccagtgccccggccccgccacggccaccgagccgtggcc
atcaaggaactcatcgtggtgtttggcggcgggaacgaggggatagtggacgaactgcac
gtgtacaacacggcgactaaccagtggttcatcccagccgtgagaggggacattcccccc
gggtgtgcagcctatggcttcgtgtgtgatgggactcgcctgctggtgtttggtgggatg
gtggagtatgggaaatacagcaatgacctctatgagcttcaggcaagccggtgggaatgg
aagagactcaaagcaaagacgcccaaaaacggaccccctccatgtcctcggcttgggcac
agcttctcccttgtgggcaacaagtgctacctgtttggaggtctggccaacgatagtgag
gaccccaagaacaacattccgaggtatctgaatgacttatatatcctggaattgcggcca
ggctccggagtggtggcctgggacatccccatcacttacggcgtcctgcctccgccccgg
gagtcacatactgctgtggtctacactgagaaagacaataagaagtccaagctggtgatc
tatggagggatgagtggctgcagactgggggacctctggaccctggacattgagaccctg
acgtggaataagcccagtctcagcggggtggcacctcttcctcgaagtcttcactcagcc
acaaccataggaaacaaaatgtacgtgtttggtggctgggtgcctctcgtcatggatgac
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacactggcttgtctcaac
ctggataccatggcctgggagaccatcctgatggacacgcttgaggacaatattccccgg
gcccgagctggccactgcgccgtagccatcaatacccgcctatacatatggagtgggcgc
gacggctaccgaaaggcctggaacaaccaggtctgctgcaaggacctctggtacctggag
acagaaaagccaccgcccccggcccgggtacagctggtacgagccaacaccaactccctg
gaggtgagctggggggcagtggcgacagccgacagttaccttctgcagctccagaaatat
gacattcctgccacggctgctactgccacctcccccacacccaatccagtcccgtctgtg
cctgccaaccctcccaagagccctgccccagcagcagccgcacctgctgtgcagccgctg
acccaagtaggcatcacgctcctgccccaggctgccaccgcacccccgaccaccaccacc
atccaggtcttgccgacagtgcctggcagctcgatttccgtgcccactgcagccaggact
caaggtgttcccgctgttctcaaagtcaccggtcctcaggcaacaacaggaaccccattg
gtcaccatgagacctgccagccaggctgggaaagcccccgtcaccgtgacctcccttcct
gcaggcgtgcgaatggttgtgccaacgcagagtgcccaggggacggtgattggcagcagc
ccacagatgagcggcatggccgcactggcggccgcagcggccgccacacagaagatccct
ccttcctcggcgcccacggtactgagtgtcccagcaggcaccaccatcgtcaaaaccgtg
gctgtgacgcctggtaccaccaccctcccggctaccgtaaaggtggcctcctcgccagtc
atggtgagcaacccagccactcgaatgctgaagactgcggctgcccaggtggggacgtcg
gtctcctctgctgccaacacatccacccgccccatcatcacagtccacaagtcagggact
gtgacagtggcccagcaagcccaggtggtgaccaccgtggtgggtggagtcaccaagacc
atcaccctggtgaagagccccatctctgtcccaggaggcagtgctctgatttccaacctg
ggcaaagtgatgtcagtggttcagaccaaaccggttcagacttcggcagtcacgggccag
gcatctacaggcccagtgactcagatcatccagaccaaagggcccctgccggccgggacc
atcctgaagctagtgacctccgcagatggcaagcccaccaccatcatcactaccacacag
gccagtggggctgggactaagcccaccatcctgggcatcagcagcgtgtccccgagcacc
accaagcctggcacgaccaccattatcaagaccatccccatgtcggccatcatcacgcag
gctggcgccacaggtgtgaccagcagtcctggcatcaagtcccccatcaccattatcacc
accaaggtgatgacttcgggaacgggagcacctgccaaaatcatcacagctgtccctaaa
atcgccactggccacgggcagcaaggagtgactcaggtggtgctaaagggggcccctgga
cagccgggcaccatcctccgtaccgtgcccatggggggtgtccgcctggtcactcctgtc
acagtctctgccgtcaagccagctgtcaccacgttggttgtgaagggcaccacaggtgtc
acaaccctcggcacagtgacaggcaccgtttccaccagccttgccggagctgggggccac
agtaccagcgcctccctggccacacccatcaccaccttgggcaccatcgccaccctctct
agccaagtgatcaaccccactgccatcaccgtgtcagccgcacagaccacgctgacggca
gccggcgggctcaccacccccaccattaccatgcagcctgtctcccagcctacccaggtg
actctcatcacggcacccagtggcgtcgaggcccagcccgtgcatgacctccccgtgtcc
attctggcctcgcctactacagaacagcccacggccacggtcaccattgctgactcgggc
cagggggaggtgcaaccgggcaccgtgactctggtgtgctccaaccccccctgcgagacg
cacgagacgggcaccaccaacacggccaccaccaccgttgtggccaacctcggggggcag
ccccagcccgcccaagtgcagttcgtctgtgacaagcaggaggcggctgcttccctcgtg
acctcgacagtagggcagcagaacggcagcgtggttcgcgtgtgctccaacccaccctgc
gagacccacgagacgggcaccaccaacacggccaccaccgccacgtccaacatggccggg
cagcgcccctgctccaacccgccccgtgagacccacgagaccggcaccaccagcacggcc
accaccgccgtggccggccagcagcgagatgcccggcgcgcctgcgtggctggccccgcg
cctgccgtggtgcgggtcagcgtggctgccggggtgttggagggggcccagggtcccggg
aagcccttgtgccaaactcgccagaccagcgtgaccagcaccaccatgactgtgatggcc
accggggcggccccgtgcgcggctggcccactcctcgggccgggcctggcagtgggggcc
ggcggccgcggcggcactgctttcgtgcagctggctcccatgagcggccagctcagaccc
ggtgtcctcggaggcaaggatggccccgtggctggcttgagcccgctggtgtccgtgggg
cgcccgctggaggcccatcacacccacacaaccaacacccccaccacggtccgctctgcc
atgggtgccggggagcccggcgaggcacgggggacccccacgcccacgtacgagagctcg
cctggcaccaccgtgactgtgacggccctggaggcgctgctgtgcccctcggcctccgtg
agccaagtctgctccaacccgccctgcgagacccacgagacgggcaccaccaacaccgcc
actacctcgaacgcgggcagcgcccagcgggtgtgctccaacccgccctgcgagacccac
gagacgggcaccacgcacacacccaccacagccacctccagtgggggtgcgggccagcct
gagggagggcagcagcctcctgccggccgcccctgtgagacacaccagaccacttccact
ggtaccaccatgtcagtcagtgtgggcgccctgctccccgatactgttccctcccacagg
accctagagtccggcctggaggtggcagcaccggccaccgtcaccccccaggccggtgct
tcgttgctggctcctttcccgacacagagggtctgttccaatcccccctgtgagacgcac
gagaccgggaccacgcacacggccaccaccgtcaccgccaacatgagctcgaaccaagat
cccccaccagctgccagtgaccaaggagaggtggagagcacccagggtgacagcgtgaac
atcaccagctccagtgccgttacaacaaccgtgtcctctacgctgacgcgggccgtgacc
actgtgacacagtccacgccggtcccaggcccctcggtgccgaagatctcatcaatgact
gaggctaccccaggggctctgaccaccgaagtccccatcccggccacgataacagtgacc
atagccaacacagaaacttctgacatgcccttctctgctgttgacatcctgcagcccccg
gaggaactccaggcctcgccagggcctcgccagcagctgccgccacggcaactcctgcag
cccgcctccacacccctgatgggggagtccgccgaggtcctgtcagcctcccagacccct
gagctccaagccgccgtggatctgagcagtacaggggacccgtcttcgggccaggagcct
gccagctcagccgtggtggccactgtggtggtccagccgcccccgcccacacagtctgaa
gtagaccagttgtcccttccccaggagctgatggctgaggcccaggcgggcaccaccacc
ctcatggtgacggggctcacccctgaggagctggcggtaactgctgctgccgaagcagcc
gctcaggccgcggccacggaggaggcccaggccctggccatccaggcggtgctccaggcc
gcacagcaggccgtcatggcaggcaccggggagcccatggacacagccgaggcagcggcg
gctgtgacgcaggcggagctgggccacctgtcggccgagggccaggagggccaggccacc
accatccccatcgtgctgacgcagcaggagctggcggccctggtccagcagcagcagcag
ctgcaggaggcacaggcccagcagcagcaccaccacctccccaccgaggccttggcccct
gccgacagcctcaacgacccgaccatcgagagcaactgtctcagtgagctggctgcggct
gtccccagcaccgtggccctgctgccctccacggccaccgagagcttggctccgtccaac
acgtttgtggccccccagccggtggtggtagccagccccgcaaagctgcaggctgcagct
accctgactgaagtggccaatggcatcgagtccctgggtgtgaagccagacctaccaccc
ccgcccagcaaagcgcctgtgaagaaggagaaccagtggtttgatgtgggggtcattaag
ggtaccaatgtaatggtgacacattatttcctgccaccagatgatgctgttccttctgac
gatgactcgggcaccgtccccgactacaaccagctgaagaagcaggagctgcagccgggc
acagcctataagttccgagttgctgggatcaacgcctgcggccgggggcccttcagcgag
atctcagcctttaagacctgtctgcctggtttcccaggggccccctgtgccattaagatc
agcaaaagtccagatggtgctcacctcacctgggagccaccgtctgtgacctccggcaaa
atcatcgagtactcggtgtacctggccatccagagctcgcaggccggtggcgagcccaag
agttccaccccggcccagctggccttcatgcgggtgtactgtgggcccagcccctcctgc
ctggtgcaatcctccagcctctccaacgcccacatcgactacaccaccaagcccgccatc
attttccgcatcgccgcccgcaatgagaagggctatggcccggccacccaagtgaggtgg
ttgcaagaaaccagtaaagacagctctggcgccaagccagccagcaagcggcccatgtcc
tctccggaaatgaaatccgctccaaagaaatctaaggcagatggtcagtga
DBGET
integrated database retrieval system
