Zalophus californianus (California sea lion): 113931350
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Entry
113931350 CDS
T07874
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04613
Neutrophil extracellular trap formation
zca05014
Amyotrophic lateral sclerosis
zca05034
Alcoholism
zca05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
113931350 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
113931350 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
113931350 (HDAC6)
09165 Substance dependence
05034 Alcoholism
113931350 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zca01009
]
113931350 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113931350 (HDAC6)
04131 Membrane trafficking [BR:
zca04131
]
113931350 (HDAC6)
03036 Chromosome and associated proteins [BR:
zca03036
]
113931350 (HDAC6)
Enzymes [BR:
zca01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113931350 (HDAC6)
Protein phosphatases and associated proteins [BR:
zca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113931350 (HDAC6)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113931350 (HDAC6)
Membrane trafficking [BR:
zca04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113931350 (HDAC6)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
113931350 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
113931350
NCBI-ProteinID:
XP_027465021
UniProt:
A0A6J2E9X2
LinkDB
All DBs
Position
X:complement(87281657..87302104)
Genome browser
AA seq
1209 aa
AA seq
DB search
MEKKASSTRRPAGRREFGGVSPGRSLRKGCAHHLHPTPQNGVRGEVSPTMTSTGQDSTTT
RQRRSRHNPHSPPHDSSVTSKRGVKKGALLHSSPSLAEVKKKGRMKKLSQAAEQDLIVGL
QGLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSF
QARFAEKEELMLVHSLEYIDLMETTQYMNEGELHILADTYDSVYLHPNSYTCACLASGSV
LRLVDAVLGNEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKHAIQRVLIVD
WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGRGQGYTMNVPWNQ
VGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLM
GLAGGKLILSLEGGYNLHSLAEGVSASLHTLLGDPCPILESPGAPCPSAQASLSCALEAL
EPFWEVLVRSAETLEEDFLEEENVEKEEEGPWQPPALPIPTWPVLQARTGLVYDQRMMGH
YNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPARPATDAELLTCHSAEYVGRLRATA
KMKTRELHREGSNFDSIYICPSTFACAQLATGAACRLVEAVLAGEVLNGTAVVRPPGHHA
ERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEQDPSVLYISLH
RYDHGTFFPMGDEGASSQIGRATGTGFTVNVAWNGPRVGDADYLAAWHRLVLPIAYEFNP
ELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGGYNLTSISESMA
ACTRSLLGDPPPLLTLSQPLLSGALASITETIQVHRRYWRSLRVMKVEDKEGPSSSKSIP
KKVTQPANRGSAVGMTAPDGNILDADTGKATSASSVEVATPDQAKSETAVVELNQDQTSE
SPTREATADQTPSEAATGGAVLDQTIVESAAVGATPGQTPSEEAVGGAEVIQTPPALCTD
NQTPPASPAQGATRQISPSKLPENLRTLGLNSEAQEAPESQIPEEERLLGEAARGQDRDD
SVLIQSFGDRGNTDQVMFYAVTPLPWCPHLVAVRPIPESGLDVTQPCQDCGTLQENWVCL
SCYQVHCGRYVSAHMLQHHEVSGHPLVLSYVDLSTWCYNCEAYVHHQALLDVKNVAHQNK
FGENMPHSH
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaggcctcaagcacccgccgacccgcaggtcgccgggaatttggcggcgtg
agccctgggcggagtttgagaaaaggctgtgcccatcacctccaccccaccccccagaac
ggcgtcaggggtgaagtctccccgaccatgacctccaccggccaggactccaccacaacc
aggcagcgaaggagtaggcataacccccattcgcccccccatgactccagcgtcacctcg
aagcgaggtgttaagaagggtgccttactccactccagccctagtctagcagaggtaaag
aagaaaggcagaatgaagaagctcagccaagcagcagagcaagacctaatcgtgggcctg
caagggctggatctgaaccttgaggccaagacactgtctggcactggcttggtgttcgat
gagcagctaaatgaattccactgcctctgggatgacagcttccctgaaggccctgagcgg
ctccatgccatcaaggaacagctgatccaggagggccttctggaccgctgtgtgtccttc
caggctcggtttgctgaaaaggaggagctgatgttggttcacagcctagaatacattgat
ctgatggagacgacccagtacatgaatgaaggagagctccacatcctagcagacacctat
gactcagtttacctgcatccgaactcatatacctgtgcctgcctggcctcgggctctgtc
ctcaggctggtggatgcggtcctggggaacgagatccggaatggcatggccatcatcagg
cctcctggacaccatgcccagcacagtcttatggatggatattgcatgttcaaccacgtg
gccgtggctgcccgctacgctcaaaagaagcatgccattcagagggtccttatcgtggac
tgggatgtgcaccatggtcaaggaacacagtttacctttgaccaggaccccagtgtcctc
tatttctccatccaccgctacgagcagggtcggttctggccccacctgaaggcctctaac
tggtccaccataggttttggccgaggccagggatataccatgaatgtgccttggaaccag
gtggggatgcgagacgccgactacattgccgctttcctgcacctccttctgccagtcgcc
cttgagttccagccccagctggtcctggtggccgctggatttgatgccctccaaggggac
cccaagggtgagatggccgccactccggcagggttcgctcagctcacccacctgctcatg
ggtctggcaggaggcaagctgatcctgtctctggagggtggctacaacctccactccctg
gctgagggcgtcagcgcgtccctccacacccttctgggagacccttgccccatactggag
tctcctggtgccccctgcccaagtgcccaggcgtcactctcctgcgctctggaagccttg
gagcccttctgggaggtccttgtaagatcagctgagaccctggaggaggacttcctggag
gaggagaatgtggagaaggaagaagagggaccgtggcagcccccggcgctcccaatcccg
acgtggccggtgctacaggctcgcacagggctggtctatgaccagcggatgatgggtcac
tacaacttgtgggacaaccaccacccagagatgcctcagcgagtctttcggatcatgcgc
cgtttggaagaactgggccttgccgggcgctgcctcacgttgcccgcacgtcccgccacg
gatgccgaactgctcacctgccacagtgctgagtacgtgggtcgtctgcgggccacagcg
aagatgaaaacccgggagctgcaccgcgagggctccaacttcgactccatctacatctgc
cccagcaccttcgcctgtgcacagctggccactggcgccgcctgccgcctggtggaggct
gtgctggccggcgaggttttgaatggcactgctgtggtgcgtcccccaggacaccatgca
gagcgggatgccgcttgtggtttttgctttttcaactctgtggctgtggctgctcgccat
gcccaagccatcagtgggcatgcgctgcggatcctcatagtggactgggacgtccatcat
ggtaatggaactcagcacatatttgagcaagaccccagcgtgctgtacatttccctgcac
cgatacgatcacggcaccttctttcccatgggggatgagggcgccagcagccagataggc
cgggccacaggcaccggcttcactgtcaacgtggcctggaacgggccccgcgtgggcgac
gccgactacctggctgcctggcatcgtctggtgctccctattgcctacgagtttaaccca
gaactggtgctggtctcggctggctttgatgctgcacggggggacccgctggggggctgc
caggtgtcacctgagggctatgcacacctcacccacctgctgatgggccttgccaatggc
cgtatcatcctaatcctagagggtggctacaacctgacatccatctcggagtccatggct
gcctgcacccgttccctccttggggacccaccaccgctgctaaccctgtcgcagcccctg
ctgtcaggggccctggcctccatcaccgagaccatccaagtccatcgcagatactggcgc
agcttgcgggttatgaaggtcgaagacaaggagggaccctccagttctaagtcgatcccc
aagaaggtgacccagccagccaaccgtgggtcagctgtggggatgaccgcaccagacggg
aacattctggatgcggacacagggaaggctacctcagcatcatccgtagaagtggccact
ccagaccaagctaagtcagagactgccgtggtggagctcaatcaggaccaaacctcggag
tctcccacccgggaagccacggcggaccagaccccctcagaggcagccacgggaggggcc
gtgctggaccagaccatcgtggagtctgccgcggttggagccacgccaggccagaccccc
tcagaggaagctgtggggggagctgaggtgatccaaacccctccagccttatgtactgac
aaccagactcctccagcctcacctgcgcaaggagccacccgccagatatcccccagtaag
ctgcctgagaatctcaggaccttgggcctaaacagcgaggctcaggaggccccagaatct
cagatcccagaagaggagaggctgctaggagaggcagctagaggtcaggacagagatgat
tccgtgctgattcagagctttggggaccgtggcaacactgaccaggtcatgttttatgcc
gtgacaccgctgccctggtgtccccatttggtggcagtacgtcccatacctgaatcgggc
ctggacgtgacccaaccttgtcaggactgtggaacactccaggagaactgggtgtgtctg
tcttgctatcaggtccactgtggccgttacgtcagtgcccatatgctccaacaccacgaa
gtctcaggacacccgctggtcctcagctacgtcgacctgtctacctggtgttacaactgt
gaggcctatgtccaccaccaggctctcctagatgtgaagaacgtcgctcaccagaacaag
ttcggggagaacatgccccactcacactaa
DBGET
integrated database retrieval system
