Zalophus californianus (California sea lion): 113931449
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Entry
113931449 CDS
T07874
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04360
Axon guidance
zca04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113931449 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
113931449 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
113931449 (L1CAM)
04090 CD molecules [BR:
zca04090
]
113931449 (L1CAM)
04091 Lectins [BR:
zca04091
]
113931449 (L1CAM)
Cell adhesion molecules [BR:
zca04515
]
Immunoglobulin superfamily
L1 family
113931449 (L1CAM)
CD molecules [BR:
zca04090
]
Proteins
113931449 (L1CAM)
Lectins [BR:
zca04091
]
I-type lectins (Siglecs)
113931449 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_C17orf99
BiPBP_C
Fndc10
Motif
Other DBs
NCBI-GeneID:
113931449
NCBI-ProteinID:
XP_027465222
UniProt:
A0A6J2EEB5
LinkDB
All DBs
Position
X:1757740..1781803
Genome browser
AA seq
1256 aa
AA seq
DB search
MAVSLRYLWPLLLCSPCLLIQIPDEYEGYRVMEPPVITEQSPRRLVVFPTDDISLKCEAS
GKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNSNFAQRFQGTYRCFASNKL
GTAMSHEIQLMAEGAPKWPKETVRPVEAEEGESVVLPCHPPPSAEPLRIYWMNSKILHIK
QDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKP
RLLFPSNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLL
DVVEEDDGEYRCLAENSLGSDRHTYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRP
QPEVTWRINGIPVDELAADQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIY
VVQLPAKILTPDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNG
TLGIRDLQANDTGHYFCQAANDQNNVTIAANLQVKDATRITQGPQSAIEKKGSKVTFTCQ
ASFDPSLQHSITWRGEGRNLQEFGDSDKYFIEDGRLVIHGLDYSDQGNYSCVAGTELDMV
ESRAELLVVGSPGPVPQLELSDRHLLKQSQVHLSWRPAEDHNAPIEKYDIEFEDKEMAPQ
EWYSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVD
VKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQIVSDPSLVVSNTST
FVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEGIKILNSSAVLVRWWPVDPAQ
VKGHLRGYNVTYWWEGSQRKHSKRHVHKAHVVVPANTTSAVLGGLRPYSSYRLEVQAFNG
RGLGPASEMTFRTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYQPLDD
GDKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKEGPGEAIVREGGTMALSGTPEF
GNISAMAGENYSVVSWVPKEGQCNFGFQIWFKALGDEKMSPHLPPQYVSYNQSSYTQWDL
QPDTDYEIHLLKERVLLKMAVKTNGTGRVRLPPAGFATEGWFIGFISAVILLLLILLILC
FIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDIKP
LGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGAASPINPAGALE
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtcgctgcggtacttgtggcctctccttctgtgcagcccctgcctgctcatc
cagatccccgacgaatatgaaggataccgtgtgatggaaccacctgtcatcacggaacag
tctccacggcgcctggtcgtcttccccacagatgacatcagcctcaagtgtgaggccagt
ggcaaacctgaagtgcagttccgctggactcgggatggcgtccacttcaaacccaaggag
gaactgggtgtgaccgtgcaccaggcaccgcattcgggctccttcaccatcacgggcaac
aacagcaactttgcccagaggttccagggcacctaccgctgctttgccagcaataagctg
ggcacggccatgtcccatgagatccagctcatggccgagggtgcccccaagtggccgaaa
gagacagtgagacctgtagaggcagaggaaggggagtcagtggtcctgccttgccacccc
ccgcccagcgccgagccactccggatctactggatgaatagcaagatcttgcacatcaag
caggatgagcgggtgacaatgggccagaacggcaatctctactttgccaacgtcctcacc
tcggacaaccactccgactacatctgccacgcccacttccctggcacgcggaccatcatc
caaaaggagcccattgacctccgggtcaaggccaccaacagcatgattgacaggaagcca
cgcctgctcttccccagcaactccagcagccatctggtagccttgcaggggcagccattg
gtcctggagtgcatcgctgagggcttccccacacccaccatcaagtggctgcgcccaagt
gggcccatgccagctgaccgagtcacctaccagaaccacaacaagaccctgcagctgctg
gacgtggtggaggaggacgatggcgagtaccgctgcctggccgagaactccctgggcagc
gaccggcacacctactacgtcactgtggaggctgccccctactggctacacaaaccccag
agccatttgtatgggccaggggagactgcccgcctggactgccaagtgcaggggaggccc
caaccagaggtcacttggagaatcaacggcattcctgtggacgaactggccgcggaccag
aagtaccggatccagcgtggggccctgatcctgagcaacgtgcagcccagcgacacgatg
gtgacgcagtgtgaggcccgcaaccggcatgggctcctgctggccaatgcctacatctat
gtcgttcagcttccggccaagatcctgaccccagacaacgagacctacatggcggtcgag
ggcagcactgcctatcttctgtgcaaggcctttggagcccccgtgcccagcgtccagtgg
ctagacaaggaagggaagaccgtgctgcaggatgaacgcttcttcccctacaccaatggg
accctgggcatccgggacctccaggccaatgacactggccactacttctgccaggctgcc
aatgaccagaacaatgtgaccattgcggctaacctgcaagtcaaagatgccactcggatc
acacaggggccgcagagtgcaatcgagaagaaaggctcaaaagtgactttcacgtgccag
gcctcctttgatccgtccttgcagcacagcatcacctggcgaggggagggccgaaacctc
caggagtttggagacagtgacaagtacttcatagaggacgggcgcctggtcatccacggt
ctggactacagcgaccagggcaactacagctgtgtggctggcaccgagctggacatggtg
gagagcagggcagagctcctggtggtggggagccccgggccggtgcctcagctggagctg
tctgatcgtcacctgctgaagcagagccaggtgcacctgtcttggagacccgccgaggac
cataacgcccccatcgagaagtatgacatcgaatttgaggacaaggagatggcgcctcag
gaatggtatagtctgggcaaggtgcccgggaaccagacctccaccaccctcaagctgtcg
ccctatgtgcactatacctttagagttactgccatcaacaagtacggccctggagagccc
agccccgcctccgagactgtggtcacacctgaggcagccccagagaagaaccctgtggat
gtgaagggggaagggaacgagaccagcaacatggtcatcacttggaagccccttaggtgg
atggactggaatgccccccaggttcagtaccgtgtccagtggcgccctcaggggacgcgg
ggtgcctggcaggaacagatcgtgagcgacccctccctggttgtgtccaacacctccacc
tttgtgccttatgagatcaaagtccaggccgtcaacagccagggcaagggccctgagccc
cagattaccattggctactcgggggaagactacccccaggcaagccctgagttggaaggc
atcaagatccttaactcaagtgctgtgctggtcaggtggtggcctgtggacccagcccag
gtcaagggccacctccgaggatacaatgtgacatactggtgggagggcagtcagaggaag
cacagcaaaaggcatgtccacaaagcccacgtggtggtgcccgccaacaccaccagtgcc
gtcctgggaggcctgcggccctacagctcctaccgtctggaggtgcaggcctttaacggc
cgaggcctggggcccgccagcgagatgaccttcaggaccccagagggagtgcctggccac
ccggaggcattacacctggagtgccagtcggacaccagcctgctgttgcactggcagccc
ccgctcagccacaacggcgtgctcactggctacgtgctctcctaccagcctctggatgac
ggggacaaggagcagctgtcctttgaccttccggaccctgagctgcggacgcacaacctg
accaacctcagccctcacctgcggtaccgcttccagctgcaggccaccacgaaggagggc
cccggagaggccattgtgcgggagggaggcaccatggccttatccgggaccccggagttt
ggcaacatctcggccatggccggcgagaattacagcgtggtctcctgggtccccaaggag
ggccagtgcaattttgggttccagatctggttcaaagccctgggggacgagaagatgagc
cctcatctgccaccgcagtatgtcagctacaaccagagctcctacacacagtgggacctg
cagcccgacaccgactatgagatccacctgctcaaggagagggtgctccttaagatggcc
gtgaagaccaatggcaccggccgtgtgaggctccctcccgccggctttgccactgagggc
tggttcatcggcttcatcagtgccgtcattctcttgctcctcatcttgctcatcctctgc
tttatcaagcgcagcaaaggcggcaaatactcagtgaaggataaggaggacacccaggta
gactccgaggcccggccgatgaaggacgagaccttcggcgagtacaggtccctggagagt
gacaatgaggagaaggccttcggcagtagccagccttccctcaatggagacatcaagccc
ctgggcagcgacgacagcctggctgactacgggggcagcgtggatgtccagttcaatgag
gacggctccttcattggccagtacagcggcaagaaggagaaggaggcggcaggaggcaat
gacagctcaggggccgcctcccccatcaaccctgccggggccctagagtag
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