Zalophus californianus (California sea lion): 113931794
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Entry
113931794 CDS
T07874
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113931794 (TNRC6A)
03036 Chromosome and associated proteins [BR:
zca03036
]
113931794 (TNRC6A)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113931794 (TNRC6A)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113931794 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113931794
NCBI-ProteinID:
XP_027465622
UniProt:
A0A6J2EFG9
LinkDB
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Position
10:complement(88765629..88868474)
Genome browser
AA seq
1963 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNPQQPQPQPQPPQQPQPQQPQPQPPQPQP
PQQPPQPAQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSAL
TNQQPQNNGEVQNSKNQSDINHNTSGSHYENSQRGPVSSPSDSSTNCKNAVVNDSPEKEA
WPSVPGSDPELASECMDADSASSSESERNIAIMASGSTSGEKDGLRNSTGLGSQNKFVVG
SSSNNVGHGSSTGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNP
STLNSASNHGAWPVLDNNGLALKGPVGSGSSGINIQCSTLGQMPNNQSINSKVGGSSTHG
TWGSLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSN
TGAWRVSTMNHPQIQAPSVMNGTSLSHLSNGEPKSGGSYGTTWGAYGSNYSGDKCSSPNG
QANGDTVNATLMQPGINGPMGTNFQVNTNKGGGVWESGAANSQSASWGSGNGANSGGSRR
GWGTPAQNTGTNIPSVEWNKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQGSAASQTNEQ
NSVWAKTGGTVESEGSTESTGRLEEKATGENQSRDRRKIDQHTLLQSIVNRTDLDPRVLS
NSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKTSPTSNDTSS
VSGWGDPKPALRWGDSKGSSCQGGWEDDSAATGMVKSNQWGNSKEEKSAWNDSQKSKQGW
GDGQKSNQGWSVSAGDNWGETARSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWG
NNINPNNSSGWDESSKPNPSQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIP
PATGKPPGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNV
NMWNKNVPNGSSRSDQQAQVHQLLPSASAISNKEAGSGSGWGEPWGEPSTPATTVDNGTS
AWGKPIDSGPSWGEPIATASNTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGSRPT
GWEEEEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGTMKGGNKQEEA
WINPFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGP
GSRPQISKESSMERSPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLG
MQNLNSVRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSL
LKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQ
QDQQGRPLSVQQQMMQQSRQLDPSLLVKQQTPPSQQQPLHQPAMKSFLENVMPHTTPELQ
KGPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGA
ISSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWK
GYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRAS
NYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTG
QKPPLSTWDNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRT
LCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRF
FAQSQSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTHCGDLHGTSLW
GTPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaaggaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagccacagccaacaatccgcagcagccacagccgcagcca
cagccgccacagcagccgcagccacagcagccgcagccacagccgccacagccacagccg
ccacagcagccgccgcagccagcacaggccttgcctcggtatcctcgagaagtgccacca
cgatttcgccaccaggaacacaaacagcttctaaagcggggtcagcattttcctgtcata
gcagcaaacctgggatctgctgttaaagtgttaagcagccagtcagaaagcagtgcttta
acaaatcaacagccacaaaataacggagaggtgcagaacagcaaaaaccagtcagatata
aaccacaatacttcaggatcccattatgaaaattcgcagcggggacctgtgtcttctccg
agtgactctagcacaaattgtaagaatgctgttgtaaacgactcccctgaaaaagaagca
tggccctcagtccctggcagtgatccagagttggcttcagaatgtatggatgctgattct
gcctccagttctgaatcagagagaaacatcgctatcatggcttcaggaagcaccagtggt
gaaaaagatggccttcggaatagcactggacttggttcccaaaacaagtttgtggttggt
agcagcagcaataatgtgggccatggaagtagtactgggccatggggtttttcccatgga
gccataataagcacatgtcaggtctctgtggatgctcctgaaagcaaatcagaaagtagc
aacaatagaatgaatgcttggggcactgtaagttcttcatcaaatggagggttaaatcca
agcactttgaattcagctagcaaccatggtgcctggccagtattagacaacaacggactc
gccctcaaagggcctgtagggagcggtagttctggcatcaatattcagtgcagtacctta
ggccagatgcctaacaatcagagtattaactctaaagtgggtggttcttccacccatggt
acctggggaagccttcaggaaacttgtgaatctgaagtaagtggtacacagaaggtttca
ttcagtggtcaacctcagaatattaccactgagatgactggaccaaataacactactaac
tttatgacctctagtttaccaaactccggttcagtacagaataatgaactgcctagtaat
acaggggcctggcgtgtgagcacaatgaatcatcctcagatacaggctccgtcggttatg
aatggcacttccctttctcaccttagcaatggagagccaaaaagtggaggctcttatggt
actacgtggggtgcctatggttctaattactctggagacaaatgttcgagccctaacggc
caagctaatggtgacactgtgaatgcaactctaatgcagcctggcataaatgggcctatg
ggcactaactttcaagtgaacacaaataaaggaggaggcgtgtgggagtctggggcagcg
aattcccagagtgcatcctggggaagtggaaatggcgcaaattctggaggaagtcgacga
ggatggggaactcctgcacaaaacactggcactaatatacccagcgtggagtggaacaaa
ctgcctagcaatcagcattccaatgatagtgcaaatggcaatggtaagaagtttacaaac
ggatggaagtctactgaggaagaggatcaaggttctgccgcatctcagacaaatgagcag
aacagtgtgtgggccaaaacaggaggtacagtggagagtgaaggtagtacagaaagcact
ggacgcctcgaggagaaagcaactggggaaaatcagagtagagacaggagaaaaattgat
cagcacacattactccaaagcatcgtaaacagaactgacttggatccacgtgtcctctcc
aactctggttggggacagactcctattaagcagaatactgcctgggatacagaaacatca
cctagaggggaaagaaagactgacaatgggacagaggcctggggaagctctgcaacacag
acttttaactcaggggcatgtatagataagactagccctactagtaatgatacctcatct
gtatcggggtggggagatcccaaacctgctctgaggtggggagattccaaaggctcaagc
tgccaggggggatgggaagatgactctgctgctacaggaatggtcaagagcaatcagtgg
gggaacagcaaagaagagaagtccgcgtggaatgattcgcaaaagagcaaacagggatgg
ggtgatggacaaaaatcaaaccaagggtggtccgtttctgccggtgataactggggggaa
actgcaaggagtaaccattggggtgaggctaataagaaatctagctcaggaggtagtgac
agtgacaggtccgtttctggttggaatgaacttggtaaaactagttcctttacttgggga
aataacataaatccaaataattcatcaggatgggatgaatcttctaaacctaatccttcc
cagggatggggagatcctccaaagtctaatcagtctctaggttggggagattcgtcaaag
ccagtcagctctccagactggaacaagcaacaagacattgtcgggtcttggggaatccca
ccagctacaggcaaaccccctggtacaggctggctgggaggacctataccagccccagca
aaagaagaagagcccacaggctgggaggaaccatccccagaatccatacgtcgcaaaatg
gagattgatgacggaacttcagcttggggagatccgagcaaatacaactacaaaaatgtg
aacatgtggaacaaaaacgtcccaaatggcagcagccgttcagaccagcaagcacaggta
caccagttgctaccatctgcaagtgccatctcaaacaaagaggcgggcagtggctccggc
tggggtgagccctggggggagccttctactccagccacaactgtggataatggtacttca
gcatggggtaaacccatagacagtggtcccagctggggggagcccattgctacggcatcc
aacacatccacgtggggctccagctctgttggtcctcaagcattaagcaaatctgggcca
aaatctatgcaagatggctggtgtggtgatgatatgccgttgcctggaagtcgccccacc
ggctgggaagaggaagaggatgtagagattggaatgtggaatagtaattcatctcaagag
cttaactcatctttaaattggccaccatatacaaagaaaatgtcatcgaagggtctgagt
ggcaaaaaaaggagaagggaaaggggaaccatgaaaggtggaaacaaacaagaagaagca
tggataaatccatttgttaaacagttttcaaatatcagtttttcgagagactcaccagaa
gaaaatgtacagagcaataagatggatctttccggaggaatgttacaggacaaacgaatg
gagatagataaacatagcctaaatattggtgattacaatcgaacggtcgggaaaggccct
ggttctcggcctcagatttccaaagagtcttccatggagcgcagcccttactttgataag
gatggcattgtagcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatgaag
cttcccccttcaaatagtgcactacctaaccaggcccttggctccatagcagggctgggt
atgcaaaacttgaattctgttagacagaatggcaatcccagtatgtttggtgttggaaac
acagcagcacaaccccggggcatgcagcagcctccagcacaacctcttagttcatctcag
cctaatctccgtgctcaagtgcctcctccattactctcccctcaggttccagtttcattg
ctgaagtatgcaccaaacaacggtggcctgaatccgctctttggccctcaacaggtagcc
atgctgaaccagctatcccaactaaaccagctttctcagatctcccagttacagcgattg
ttagcgcagcagcaaagggcccaaagtcagagaagcgtgccttctgggaaccggcagcag
caagaccagcagggtcgacctcttagcgtgcaacagcaaatgatgcagcagtcccggcaa
ctcgatcccagcctgttggtgaagcagcagaccccgccatctcagcagcagccgctccat
cagccagccatgaaatctttccttgagaacgtcatgccccacactacacctgagctgcaa
aaagggccatcaccaataaatgctttcagcaacttcccaataggcttgaactctaacttg
aatgtaaatatggatatgaacagtattaaagagccacagtcaagactaaggaagtggact
acagtggacagcatttctgtgaacacatctttggatcaaaactccagcaaacatggtgct
atttcaagtggtttcaggctggaagagtctccatttgttccctatgactttatgaacagc
agtacttctccagccagccctccgggttcaataggagatggctggccacgtgccaaatcg
cctaacggctctagcagtgttaactggccaccagaatttcgccctggtgaaccatggaaa
ggttatccaaacattgaccctgaaactgacccttacgtcactcctggcagtgtcataaac
aatctttcaattaatactgtgcgggaagttgaccacctcagggacaggaacagtgggtca
tcctcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctcc
aactacaacgttcccctcagcagtacagcacaaagcacttcagccagaaatagtgattcc
aaattgacatggtctcctggttcagttacaaacacctctctggctcatgagctgtggaag
gtccctttaccacctaaaaacatcactgctccgtcccgcccacctccgggactgactggt
cagaagccacccttgtctacgtgggataactctccccttcgtgtaggtggaggatggggg
aattctgacgccaggtacaccccaggttccagctggggtgagagcagctcagggagaata
acaaattggcttgttctaaagaaccttacacctcagatcgatggctcaactctgcgtact
ctgtgcatgcagcatggcccactgataacattccacctgaacctcccacatggaaatgct
ttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaagtctctgcacatgtgt
gtattggggaacactactattcttgctgagtttgccagtgaagaggagatcagccgtttc
tttgcacaaagtcagtctctgaccccttctcccggctggcagtctctcgggtccagccag
agccggctgggctccctcgactgttcccactcgttctccagccggaccgatctcaatcac
tggaatggtgctgggctgtcgggaactcactgtggagaccttcacggcacttcactctgg
gggaccccacattattccacaagcctgtggggtcctcccagcagcagcgacccccgggga
attagcagcccatcccccattaacgcttttctttctgttgaccacctgggtgggggtgga
gagtccatgtaa
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