Zalophus californianus (California sea lion): 113931878
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Entry
113931878 CDS
T07874
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113931878 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zca04147
]
113931878 (COPA)
Membrane trafficking [BR:
zca04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113931878 (COPA)
Exosome [BR:
zca04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113931878 (COPA)
Exosomal proteins of bladder cancer cells
113931878 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
113931878
NCBI-ProteinID:
XP_027465823
UniProt:
A0A6J2EJS9
LinkDB
All DBs
Position
10:complement(4947998..4998413)
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AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDIPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLYDQVGVTQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKGQICKVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccctggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtacccttattgacaagtttgatgaacatgatggtccagtgcgaggcattgacttccat
aagcagcagccattgtttgtctctggaggagatgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacattgcttgggcatttagactacattcgcaccacattt
ttccatcacgaatatccctggattctgagcgcctcagatgaccagaccatccgggtgtgg
aactggcagtctagaacctgtgtctgcgtgttaacaggacacaaccattatgtaatgtgt
gctcagtttcacccctcagaagacctggttgtgtcagccagcctggaccagactgtgcgt
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgccgtggagtccgat
gtgcgaggaataactggggttgatctgtttggaacgacagatgcggtggtgaagcacgtg
ctggagggtcatgatcgtggagtaaactgggctgccttccaccccactatgccccttatt
gtatctggggcagatgaccgtcaagtgaagatctggcgcatgaatgagtcgaaggcatgg
gaggttgacacctgccgcggtcattacaacaacgtgtcttgtgctgtcttccaccctcgc
caagagctgatcctcagcaattctgaggacaagagtatccgtgtctgggatatgtccaaa
cggactggggttcagaccttccgcagggaccacgatcgtttctgggtcctagctgcccac
cccaatctgaacctctttgcagcaggccatgatggtggcatgattgtgtttaaactggaa
cgggaacggccagcctatgctgttcatggcaatatgctccattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccggtgttcaatatgtcatacaatccagcagaaaatgcagtactgctgtgt
acgagagccagcaatttagagaacagtacctatgacctgtacaccatccccaaggacgca
gactcccagaatcctgacgctcctgaagggaaacgatcctcaggcctgacagccgtttgg
gttgctagaaatcggtttgctgtcctagatcggatgcattcgctcctgatcaagaatctg
aagaatgagatcaccaaaaaggtgcaggtgcccaactgtgatgagatcttttatgctggc
acgggcaacctcctgcttcgagacgcagaatccattacgctctttgatgttcagcagaag
cggactctggcctctgtgaagatttctaaggtgaaatatgttatctggtcagcagacatg
tcccacgtagcactactggccaaacatgagcactcatgccctttgcctcttacagccatt
gtgatctgtaaccgcaaactggaggctctgtgtaacattcatgagaacattcgcgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gccgtcaccactggggactacgggatcatccggactctggatttacccatctatgtcacg
cgcgtgaagggcaacaatgtgtattgcctggacagggagtgtcgtccgcgggtgctcacc
attgatcccactgagttcaagttcaagctggccctgatcaacagaaaatatgatgaggta
ctgcacatggtgaggaatgccaagctagtaggacagtccatcattgcttacctccagaag
aagggctacccggaagtggcactgcatttcgtcaaggatgagaaaactcgctttagtctg
gcactcgagtgtggaaatattgagattgctctggaagcagccaaagccctggatgacaag
aactgctgggaaaaactgggagaagtggccttgctacaagggaaccaccagattgtggaa
atgtgttatcaacgcaccaaaaactttgacaaactttctttcttgtaccttatcactggc
aacctagagaaacttcgcaagatgatgaagattgctgagatccgaaaggacatgagtggc
cattatcagaatgccctctacctgggtgacgtgtccgagcgggtgcggatcctgaagaac
tgtgggcagaagtcactggcctatctcacagctgctactcatggcttagatgaagaagct
gagagcctgaaggagacatttgacccagagaaggagactatcccagacattgatcctaat
gccaagctgctccagccacctgcacctatcatgccattggataccaactggcccttactg
actgtgtctaaaggcttctttgaaggctccattgccagcaagggcaagggaggagcactg
gctgctgatattgacattgacactgttggcaccgagggctggggagaggatgcggagctg
cagctggacgaagacgggtttgtggaggctacagaaggtctgggggacgacgctcttggc
aaggggcaggaagaaggaggtggctgggatgtcgaagaggacctggagctccctcctgag
ctggatataccccctggggcagctgggggtgctgaggatgggttctttgtgccccccacc
aagggaaccagcccaactcagatctggtgcaataactctcagcttccagttgatcacatc
ctggcaggctcttttgaaacagccatgcggctcctttacgaccaagtgggggtgacccag
tttggcccctataagcaactgttcctacagacctatgcccgcggccgtaccacctatcag
gccctgccctgcctgccctccatgtacggctatcctaatcgcaattggaaggatgcaggg
ctgaagaatggtgtaccagcggtgggcctgaagcttaatgacctcattcagcggctgcag
ctctgctaccagctcaccacagttggcaagtttgaggaggctgtggaaaaattccgctcc
attttgctcagtgtgcctcttctcgttgtggacaataaacaggagattgcagaggcccag
cagctcatcaccatctgccgtgagtacattgtgggtttgtctatggagatagaaaggaag
aagctgcccaaagagactctggaccagcagaagcgcatctgtgagatggcagcctatttc
acccactcaaacctgcagcctgtgcacatgatcctggtgctgcggacggccctcaacctc
ttcttcaagctcaagaactttaagacagctgccacctttgctcggcgcctattggaactt
gggcccaagccggaggtggctcaacagacccgcaaaattctgtctgcttgtgagaagaac
cccacagatgcctaccagctcaattacgacatgcacaacccttttgacatctgtgctgca
tcctatcggcccatctaccgtggaaagcctgtagagaaatgtccactcagtggagcctgc
tattcccctgagttcaagggtcaaatctgcaaggtcactacagtgacagagattggcaaa
gacgtcattggtttaaggatcagtcctctgcagttccgctaa
DBGET
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