Zalophus californianus (California sea lion): 113931881
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Entry
113931881 CDS
T07874
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03430
Mismatch repair
zca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113931881 (PMS2)
03460 Fanconi anemia pathway
113931881 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zca03400
]
113931881 (PMS2)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113931881 (PMS2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
113931881
NCBI-ProteinID:
XP_027465827
UniProt:
A0A6J2EG32
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Position
10:complement(109033877..109060877)
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AA seq
860 aa
AA seq
DB search
MERAEGPSTELAKAIKPIDQKSVHQICSGQVVLSLSTAVKELVENSVDAGATTIDLRLRD
YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEALSSLCALSDV
TISTCHTSAKVGTRLVFDHNGKIVQKTPHPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKE
YAKMVQVLHAYCIISAGVRVSCSNQVGQGKRQPVVCTSGSASIKENIASVFGQKQLQSLI
PFVQLPPSDSVCEEYGLSGADALNTLFHISGFISHCAHGVGRSSTDRQFFFINGRPCDPA
KVSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLV
GMFDSDVNKLNVSQQPLLDMEGHVVKMHSAEMDKPQPAKPDSPASLRTGEEKRAVTISRL
RETFSLRHTTEDRPEGLKSPEPRRVSPRQKRHEQLPGASGSLCARRPIPGTDSRGPQEEV
VRSAQGPCDRRDRGDTEQDLGHSCPSASPGEGLGSPEVGGHASKEISQGSVESRAESPET
DRRSADPEGHLDQEDGGRTHGVLPRPADVSSSNTKRFKKDGIPFSSDTCQGLVKTQTSPA
FQVDVAVKIHKKIVPLAFSMVSLAQRIKQLQQQEQRREGAQNCRKFRAKICPGENQAAEE
ELRKEISKAMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTALQGQR
LIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEGAPVTKRAKLISLPTSKNWTFGPQD
IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWN
CPHGRPTMRHIANLDVISQS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggcggaagggccgagtacagaacttgctaaggccatcaaacctatcgatcag
aagtcagtccatcagatttgttctggacaggtggtactcagtctaagtactgctgtgaag
gagttggttgaaaatagtgtggatgccggagccactactattgatctaaggcttagagac
tatggggtggatctcattgaagtttcagacaatggatgtggggtagaagaagaaaacttt
gaaggcttaactctgaaacatcatacttctaagattcaagactttgctgacctaactcag
gttgaaacttttggctttcggggggaagctctgagctcactttgtgcactgagtgatgtg
actatttctacctgccacacatccgcgaaggttgggactcgactggtgtttgatcacaat
gggaaaattgtccagaaaaccccccacccacgacccagagggacgactgtcagtgtgcag
cagctattttatacactgcctgtgcgccataaggagtttcaaaggaatattaagaaggag
tacgccaaaatggtccaggtcttacatgcatactgtatcatttcagcaggcgtccgcgtc
agttgcagcaatcaggttgggcaagggaaacggcagccggtggtatgcaccagtgggagt
gccagcataaaggaaaatattgcatcggtgtttgggcagaaacagctgcaaagcctcatt
ccctttgttcagctgccccctagtgactccgtttgtgaagagtatgggctgagcggagca
gatgctctgaataccctgtttcacatctcaggcttcatctctcactgtgctcacggtgtt
ggaagaagttcaacagatagacagtttttcttcatcaacgggcggccttgtgacccagca
aaggtttccagacttgtgaacgaggtctatcacatgtataatcgacatcaatatccattt
gttgttcttaacatttctgttgattcagaatgtgttgatatcaatgtcactccagataaa
aggcaaattttactacaagaggagaaacttctattggcagttttaaagacatctttggta
ggaatgtttgacagcgacgtcaacaaactcaatgtctctcagcagccgttgttggatatg
gaaggtcacgtagtaaaaatgcactcggcagagatggacaagcctcagccagcaaagccg
gatagtcctgcttcgttaaggaccggagaagagaaaagggcagtgaccatttccagactg
agagagaccttttctcttcggcacacgacggaggacaggcctgagggcctgaagagcccg
gaaccgaggcgggtttccccgagacagaagagacacgaacagcttcccggcgcttcaggc
tctctctgcgcccggaggcccatccctggcacagactcgcgtggcccccaggaggaggtg
gtgcgttcagctcagggcccctgtgaccgcagggacaggggggacacggagcaggacttg
gggcatagctgcccatcagccagcccgggggaagggctcggcagccccgaagtgggcggt
cacgccagcaaggagatttcccaaggaagtgtggagtctcgggcggagtcacctgagact
gaccgtcgctctgcagaccccgaaggccatctagaccaggaggatggcggtcggacacat
ggagtcttgcctcggcccgccgatgtgtcctcctcaaacacaaagcgttttaagaaagat
ggaattcctttcagttctgacacctgccaagggttggtgaagactcagacctcaccagca
tttcaggttgacgtggctgttaaaatccataagaaaatagtgcccctggccttttctatg
gtctctttagctcaacgaataaagcagttgcaacaacaagaacagcgaagagaaggcgca
cagaattgtaggaagttcagggccaagatttgcccaggagaaaaccaagccgcagaggaa
gaactcagaaaggagataagtaaagcgatgttcgcggaaatggagatcattgggcagttt
aacttgggatttataatcactaaactgaatgcagacatcttcatagtggaccagcatgct
acggacgagaagtacaactttgagatgctgcagcaacacactgccctccagggtcaaagg
ctcatagcaccccagactctcaacttaacggctgtcaatgaagctgttctcatagaaaac
ctggagatattcagaaagaacggctttgattttgttatcgacgaaggggctccagtcacc
aaaagagctaaattgatttctttgccaactagtaaaaactggaccttcggaccccaggac
atcgacgagctgatctttatgctgagcgacagtcctggggttatgtgccgcccttcccga
gtcaggcagatgtttgcctccagagcctgtcggaagtccgtgatgattggaactgctctt
aacacaagcgagatgaagaaactcattacccacatgggcgagatggaccatccctggaac
tgtccccacggaaggccgaccatgagacacattgccaacctggatgtcatttctcagagc
tga
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