Zalophus californianus (California sea lion): 113931996
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Entry
113931996 CDS
T07874
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113931996 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113931996 (SMG7)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113931996 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
113931996 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
113931996
NCBI-ProteinID:
XP_027466111
UniProt:
A0A6J2ECX8
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Position
10:44287789..44372717
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AA seq
1257 aa
AA seq
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MSLQSAQYLRLVWTNHLLLCSTGHSHLGTARTLLECLKPFYLMRNWMFLQIVIVGENVSF
KSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLE
YALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQEL
CTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTS
QAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA
LSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAF
NSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQN
KSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSS
TNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRQIRQQRLISIGKWIADN
QPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQEPSMIESLASDGNPGLKSVLST
GRNLSNNCDPGEKPMVTFKENIKPREVNRDQGRSFPPKEVRRDCSKGITVTKNDGKKDNS
KRKTETKKCILEKLQETGKQSVAVQVKSQTELRKTPVSEARKTPVTQTPSQASNSQFIPI
HHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQ
AGKQSHIPYSQQRPSGPGPMNQGPQQPQPPSQQPLTSLPAQPTAQSTSQLQVQALAQQQS
PTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQSQDPIKL
FEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRAVMAQPANM
DRRGKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPA
LLGPLASLPGRNLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSVFNEVYGKNLTT
SSKTELNPSLAPQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHN
HNSLPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHPASTPSGT
WAGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcagagcgcgcagtatctccgtctagtttggaccaaccatctgctcctgtgt
tctacagggcactctcaccttggaactgcaagaaccctgctggaatgtcttaaaccattc
taccttatgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcattt
aagtcccagatgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatatt
aggcaggcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaggtc
tggacatccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaa
tacgctttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatc
acaacactacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggca
aacctttctctgttcctagaggcagctagtggcttctatactcagttattacaagaacta
tgtacagtgtttaatgtagatttaccatgccgtgtgaagtcttcccaattgggaattatc
agcaataaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcctat
atctgccagcactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagt
caggcagaatcctactataggcatgcagctcagcttgtcccctctaatggtcagccttat
aatcagttggctatcttagcttcttccaaaggagaccatctgaccacaattttctactac
tgcagaagcatcgctgtgaagtttcctttcccagctgcctccactaatctacaaaaagca
ctttctaaagcactggaaagccgggatgaggtgaaaaccaaatggggtgtttctgacttc
atcaaggcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttg
agccctcttcgagagaaattggaagaacagtttaagaggctgctattccaaaaagctttc
aactctcagcagttagttcatgtcactgtcattaacctgtttcaacttcatcaccttcgt
gactttagcaatgaaacggagcagcatagttacagccaagatgagcagctgtgttggaca
cagttgctggccctctttatgtcttttcttggcatcctgtgcaagtgccctctccagaac
aagtctcaggaggagtcctacaatgcctatccccttcctgcagtcaaggtctccatggac
tggctgagactcagacccagggtctttcaggaggcagtggtggatgaaagacagtacatt
tggccctggctaatttctcttctaaatagtttccatccccatgaagaggatctttcaagt
actaatgctacaccacttccagaggagtttgagttacaaggattcttggctttgagacct
tctttcaggaacttggatttttccaaaggccaccagggtattacaggagacaaagaaggt
cagcaacgacaaatacggcagcagcgcttgatctctataggcaaatggatcgccgataat
cagccaaggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatc
ccagagttaatactggaagaccccagtgaagccaaagagaacctcattctgcaagaacca
tccatgatagagtcactggcttcggatgggaacccaggactaaaatcagtgctgtccacg
ggccgtaatctaagcaacaactgtgacccaggagagaaaccaatggtcaccttcaaagag
aacattaagccgcgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtg
agaagggactgtagcaaaggaattactgtaactaagaatgatggaaagaaggacaacagc
aagaggaaaacagaaaccaagaaatgcatcttagaaaagttacaggaaacaggaaagcag
agtgtggcagtgcaggtaaaatcccagacagaactaagaaagactccagtgtctgaagcc
aggaaaacacctgtaactcaaaccccaagtcaagcaagtaattcccagttcatccccatt
catcaccctggagccttccctcctcttcccagccggccagggttcccgccccccacatac
gttattccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtt
tctgtcccaggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaa
gctgggaaacagtcccacattccttacagccagcaacggccctctggaccagggccaatg
aaccagggacctcaacaaccacagccaccttcccagcaaccccttacatctttaccagct
cagccaacagcacagtctacaagccagttgcaggttcaagctctagctcagcaacaatcc
cccacaaaagctgtgccggctttgggaaaaagccctcctcaccactctggattccagcag
tatcaacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccatta
gggaaaattatgcctgtgaaacagccctactaccttcagtcccaagaccccataaaactg
tttgagccgtcactgcaacctcctgtaatgcagcagcagcctctagagaaaaaaatgaag
ccttttcccatggagccatataaccataatccctcagaagtcaaggtcccggaattctac
tgggattcttcttacagcatggccgataacagagctgtaatggcacagccagcaaatatg
gaccgcagaggcaaacggtcaccaggagtcttccgtccagagcaggatcctgtgcccagg
atgccatttgaggaccccaagagctcccctctgcttcctccggacctgttaaagagtctg
gctgccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagct
ctgctggggcctctcgcctctcttcctggacggaacctctttaaatccttgttggagaag
ccctcggaactcatgtcccattcctcctctttcttgtccctcaccggattctctctcaat
caggaaagatacccaaataacagtgtgttcaatgaggtctatgggaaaaacctgacaacc
agctccaaaacagaacttaatccttcgctcgccccccaggagacatcactgtactccctc
tttgaagggaccccctggtctccatcacttcctgccagttcagatcattcaacaccagcc
agccaatctcctcattcctctaacccaagcagcctgccaagctcccctccaacacacaac
cataattctcttccattctccaactttggacccattggaactccagataacagggatagg
agaactgcagatcggtggaagactgataagccagccatgggtgggtttggcattgactat
ctctcagcgacatcatcctctgagagcagttggcatccagccagcactccaagtggcacc
tgggcaggccacggcccctccatggaggattcctctgctgtcctcatggaaagcctaaag
tctatctggtccagttccatgatgcaccctggaccttccgctctggagcagctgttaatg
cagcagaagcagaaacagcagcggggacaaggcaccatgaaccctccacactga
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