Zalophus californianus (California sea lion): 113932024
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Entry
113932024 CDS
T07874
Symbol
TRIM4
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM4
KO
K11998
tripartite motif-containing protein 4 [EC:
2.3.2.27
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113932024 (TRIM4)
Enzymes [BR:
zca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113932024 (TRIM4)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113932024 (TRIM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
PRY
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
zf-Nse
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
113932024
NCBI-ProteinID:
XP_027466178
UniProt:
A0A6J2EKU5
LinkDB
All DBs
Position
10:107131993..107152042
Genome browser
AA seq
475 aa
AA seq
DB search
MEAEDLQEDLTCSICLDYFEDPVSIECGHNFCRGCLHRSWAPGGGSFPCPECRQPSLPAA
MRPNWALARLTERTRRRPQGPVPPGQCGRHREALRLFCEEDQRPVCLVCRESREHQAHTM
APIDEAFCNYREKLLKTQCSLKDKMKKAIYFQDVEMKNITKWKEKMKNQRVTISAEFAKL
HHFLAEEEQLFLQRLSKEEEETKKRQNENTLKLHQKITSLKQLILEVKEKSESSSLELLQ
NPKDVLTRSESQDVDYSLEVLTVKTVCQIPMMKEMLKRFQVAVNVAEDTAHPKLIFSQDG
RYVKNGASASSWPLFSSAWSYISGWRNRQRNAQFVGRFQHLPCVLGENVFTSGKHYWEVE
NRDNLEIAVGVCREDVMGLADASEMGPRVGIWALCWGSAGFRPLKSSSVSPTKQEPALSR
VGVFLDAGAGSICFYGAVDGTHLYTFSCPRVSRLRPFFWLSPLASLVIPAATGGK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgaggacctgcaggaggacctgacctgctccatctgcctggactatttcgag
gacccggtgtccatcgagtgcggccacaacttctgccgcggctgcctgcaccgcagctgg
gcgccgggcggcggctcgttcccctgccccgagtgccggcagccttcgctgcccgccgcg
atgcggcccaactgggccctggcccgcctgacggagaggacgcgacgccggccccagggc
cccgtgccccccggccagtgcggccgccaccgggaagcgctgcggctcttctgcgaggag
gaccagcggcccgtgtgcttggtgtgcagggagtcccgggagcaccaggcgcacaccatg
gcgcccatcgacgaggccttctgcaactaccgggaaaagcttcttaagactcagtgtagt
ctgaaggacaagatgaagaaagccatatattttcaggacgtggaaatgaagaacattacc
aagtggaaggagaagatgaagaatcagcgagtgacaatcagcgcagagtttgcaaagctg
caccacttcctggcagaagaagagcagctgtttcttcagagactgagcaaagaagaagaa
gagacgaagaagagacagaatgagaacacattaaagctccatcagaaaatcacctccttg
aagcagctcatcttagaggtcaaggagaagagcgaaagctccagcctggagctgcttcag
aatccaaaagatgtgttgaccaggagtgagagccaggatgtggactattcccttgaagtt
ctgacagtgaagactgtgtgccagattccgatgatgaaggaaatgctgaagcgattccaa
gtggctgtaaatgtagctgaagacacggctcatcccaagcttatcttctcccaggatggg
agatatgtgaaaaatggagcatcggccagttcttggccattgttttcttcagcatggagc
tacatcagtggatggaggaaccgtcagaggaacgcacagtttgtgggaagatttcagcac
ttaccctgtgttttgggagaaaatgttttcacttcagggaaacattactgggaagttgag
aaccgggataacctggagattgccgtgggggtgtgtcgggaggacgtcatggggcttgct
gatgcttcagaaatgggcccccgtgtgggcatctgggctctctgttggggttccgctggc
tttcggcccctgaaaagctcttctgtaagtcctaccaagcaagagcctgctcttagccgg
gtgggagttttcctcgatgctggggctgggagcatctgcttctatggcgctgtggacggc
acgcacctatataccttctcttgtcctcgcgtctctcgcctccggccatttttttggttg
agtccgttagcatctctagtcatcccggcagcgacgggtgggaaatga
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integrated database retrieval system
