Zalophus californianus (California sea lion): 113932108
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Entry
113932108 CDS
T07874
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04612
Antigen processing and presentation
zca05145
Toxoplasmosis
zca05152
Tuberculosis
zca05164
Influenza A
zca05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
113932108 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
113932108 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
113932108 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
113932108 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
113932108 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zca01001
]
113932108 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
zca04054
]
113932108 (CIITA)
Enzymes [BR:
zca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
113932108 (CIITA)
Protein kinases [BR:
zca01001
]
Serine/threonine kinases: Other
TAF1 family
113932108 (CIITA)
Pattern recognition receptors [BR:
zca04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113932108 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
113932108
NCBI-ProteinID:
XP_027466389
UniProt:
A0A6J2EBW5
LinkDB
All DBs
Position
10:78104472..78152239
Genome browser
AA seq
1210 aa
AA seq
DB search
MNHFQTILTRVQMLLSSHRPSQVQALLDHMLEKELLSREYHFALLREPDGEALARKISLT
LLEKGDPDLALLRWAWSGLQVPAAERDPDSKDHSGSGQCAAMELGSLEGGYLELLNSSAD
PLQLYHLYDQTDLAREEIELCSEPDMDTINCEQFSKLLCDMEGDEETREAYANIAELDQY
VFQDSQLDGLGKDIFIEHIGLEEMISESVEVLEEAGQKSQKRPFPEELSVDLKHRKLAEP
LAMPMVTGTFLVGSVSDSAALPCLSPPAVFNKEPASGQSWLEETVLMPVHPSSSLLSHLS
LPAGCIQIIPGLPSLPQGLWQISGPGTGVSGMVIYQGEMPPASQVLPSSGPAVQSLPKSP
DRPGSTSPFAPSAADLPGMPEPALTSRANRTEDQMSPTQSQAAHEISSKPPKWPESVERL
CSSLRDEYLAEFAGPEDILVEVELVKARLERSSGKSQERELATPDWAERQLARGGLAKVL
GAAGDRRRPRETQVIAVLGKAGQGKSRWAREVSRAWACGQLPQYDFVFYLPCHCLDRAKG
DTYRLQDLLFCLGPQPRPMDEEVFDHILRRPDRVLLILDAFEGLEGQDGLLHSAGGPMST
EPHSLRGLLARLFQRKLLRGCTLLLTARPWGRLAQSLSKADVLFEVAGFSAEQAETYVTR
YLECTGATAHRERVLALLRGQPFLLSLSHSPTVCRAVCRLTETLLELGDKAELPSTLTGL
YVGLLGPAARDSPPEALAGLAKLAWELGRKHQGTLQGSQFPSATVRAWAVAKGLVQPIPG
APDVELAFSSFLLQCFLGAVWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAG
LLFQPHADCLGALAGPAAAAVGARKQKVLSRYLKRLQPGTLQAGRLLELLHCAHEAADAA
IWQHVVQGLPARLSFLGTRLTPPNTYVLCSALAAAGQDFSLDLRSTGIDPAGLGRLVGLS
CVTHFRASLSDMAGLWESLQQRGETKLLRAVEEKFTIEPFKAKSPKDVEDLGNLVQIQRT
RNSSEDTARELPAVRDLKKLEFALGSVLGPQAFPKLVRILEAFSSLQHLDLDSLSENKIG
DEGVEQLSATFPRLRALETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNSICDVG
AESLAHVLPDMVSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHL
QQLDSRISLR
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctgactcgggtccagatgctgctgtccagccatcggccg
agtcaagtgcaggccctcctggaccacatgctggagaaggagcttctgtcccgggagtac
cacttcgccctgctccgcgagcctgatggcgaggccctggccaggaagatctccttgacc
ctgctggagaaaggagacccagacttggccctcttgaggtgggcatggagtgggttgcag
gtcccagcggccgagagggatcccgactccaaggaccacagtggcagcggacagtgtgcc
gccatggagttggggtctctagaaggcgggtacctggagcttctcaacagcagtgccgat
cccttgcagctctaccacctctatgaccagacggacctggctagagaagagattgagctc
tgctcagaacccgacatggacaccatcaactgcgaacagttcagcaaactgttgtgtgac
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtac
gtgtttcaggactcccaactggacggtctgggcaaagacattttcatcgagcacatagga
ttggaagaaatgatcagtgagagtgtcgaggtgctggaggaagcagggcagaaaagtcag
aaaagacccttcccagaggagctgtccgtggacttgaagcacaggaagctggctgagccc
ctcgctatgcccatggtgactggcacgttcctggtcgggtcagtgagtgactccgcagct
ctgccctgcttgtcaccacctgctgtgttcaacaaggagccagcatccggccagagctgg
ctggaggagaccgtcctgatgcctgtgcacccttccagttccttgctgagccacctgagt
cttcctgctggatgtatccagatcatccctggcctcccctctctgccccaggggctctgg
caaatctcagggcctgggacgggggtgtctggtatggtcatctatcaaggcgagatgccc
ccggccagccaagtgcttccttctagtggcccagctgtgcagagcctccccaagtcccca
gatcggcccggctccaccagcccctttgccccgtctgcagctgaccttcctggaatgcca
gaaccagctttgacctcccgtgcaaataggacagaggaccagatgtcccctacccaaagc
caggcagctcacgagatctccagcaagcctccaaaatggcctgagagcgtggagcggttg
tgcagctccctacgggacgagtacctggctgagttcgcaggcccggaagacatcctggtg
gaggtggagctggtgaaggcgcggctggagagaagcagtggcaaaagccaggagagggag
ctggccaccccggactgggcagagaggcagttggcccgcgggggtctggccaaggtgctg
ggggctgccggggaccggcggcggccacgggagacacaggtgatcgccgtgctgggcaaa
gcaggacaggggaagagccgttgggcccgggaagtgagccgggcctgggcctgcggccag
ttgccccagtacgacttcgtcttctacctcccctgccactgtttggaccgtgccaaaggg
gacacttaccgcctgcaggatctgctcttctgcctgggcccccagccacggcccatggac
gaggaggtcttcgaccacatcttgaggcggcccgaccgggttctgctcatcctggacgcc
ttcgaggggctcgaaggccaagatggcctcctgcacagcgcgggcggacccatgtccaca
gaaccccactccctccgggggctgctggccagactcttccagcggaagctgcttcgaggc
tgcaccctgctgctcaccgcccggccctggggccgcctggcccagagcctgagcaaggcc
gacgtcctgttcgaggtggctggcttctcagccgagcaggccgaaacctacgtgacgcgc
tacttggagtgcactggggccaccgcgcaccgggagcgagtcctggccctcctccggggc
cagccgttcctgctcagcctcagccacagccccaccgtgtgccgggccgtgtgccggctc
actgagaccctcctagagctgggtgacaaggctgagctgccctccacgctcacgggactc
tacgtgggcctgctgggccccgcggcccgggacagccccccggaggccctggcaggactg
gccaagctggcctgggagctgggccgcaaacaccagggcaccctgcagggcagccagttc
ccatcggccaccgtgagggcctgggccgtggccaaaggcctggtgcagcccatcccgggc
gcccccgatgtggagctggccttctccagcttcctcctgcagtgcttcctgggggccgtg
tggctggccttgagcactgaaatcaaggacaaggagctgccacagtacttggcgttgacc
ccgaggaagaagaggccctatgacaactggctggagggcgtgccgcgcttcctggctggc
ctgcttttccagcctcacgccgactgcctcggagccctggcagggccagccgcggccgcc
gtcggggccaggaagcagaaggtgctcagcaggtacctgaagcgcctgcagccagggacg
ctccaggccgggcggctgctggagctgctgcactgtgcgcacgaggccgcggacgccgcc
atctggcagcacgtggtgcaggggctcccagcccgcctctccttcctgggcacccggctc
acaccccccaacacctacgtgctgtgcagcgccttggcggcggctggccaagacttctcc
ctggacctccgcagcactggcattgaccccgctgggctggggagactcgtgggactcagc
tgcgtcacccatttcagggcttcgctgagtgacatggcggggctgtgggagtctctacag
cagcgtggggagaccaagctgctccgggcagtggaggagaagttcaccatcgagcctttc
aaggccaagtccccaaaggatgtggaagacctcggcaacctcgtgcagatccagaggaca
aggaattcctcggaagacacagctagagagctccctgctgtccgggacctaaagaagctg
gagtttgcgctgggctctgtcttaggcccccaggcttttcccaaactggtgaggatcctt
gaggccttttcctcccttcagcatctggacctggactcgctgagcgagaacaagatcggg
gacgagggtgtcgagcagttgtcagccaccttccctcggctgagggccctggagactctc
aacttgtcccagaacagcatcactgacgtgggcgcctgcaagctcgccgaggccctgccc
tccctggctgcgtccctcctcaggctgagcctgtacaataacagcatctgtgacgtggga
gctgagagcctggcacacgtgcttccagacatggtgtccctcagggtgttggacgtccag
tataacaagttcaccgccgctggggcccagcagctcgctgccagcctgagaaagtgccct
catgtggagacactggcgatgtggacgcccaccatcccgtttggcgttcatgaacacctg
cagcagctagactcacggatcagcctgagatga
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integrated database retrieval system
