Zalophus californianus (California sea lion): 113932273
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Entry
113932273 CDS
T07874
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04115
p53 signaling pathway
zca04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113932273 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
113932273 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113932273 (COP1)
Enzymes [BR:
zca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113932273 (COP1)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113932273 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113932273 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
113932273
NCBI-ProteinID:
XP_027466940
UniProt:
A0A6J2EDE5
LinkDB
All DBs
Position
10:51081690..51328168
Genome browser
AA seq
733 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSAAAAAVAAAAASGGAAQAAGS
GGLGGPARPVLVAAAVSGSGGGAVSAGLSRLSCSARPSAGVGGSSSSLGSGSRKRPLLAP
LCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVD
NIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANV
NLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEE
MSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRK
RLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLY
NGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISW
SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV
KLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGH
RKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACG
SENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIA
ANSQGTIKVLELV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggagccgccaggccgggtcgggctccgccgggaccagccctggctcttctgcg
gcctcctcggtgacttccgcctcctcgtccttgtcctcttccccgtcgcccccttccgcg
gcggcggcggcggtggcggcggcggcggcgtccggcggggcggcccaggccgcggggtcg
ggcggcctcgggggcccggcgcggcctgtgctggtggccgccgccgtgtccggcagcggc
ggcggggcggtgtccgcgggcctgtctcggctcagctgctcggccaggcccagcgccggc
gtgggagggagcagctccagcctcggcagcggcagcaggaagagacctctgctcgccccc
ttgtgcaacgggctcatcaactcctacgaggacaaaagcaacgacttcgtgtgccctatc
tgctttgatatgattgaggaagcatacatgacgaaatgtggccacagcttttgctacaag
tgtattcatcagagtttggaggataataatagatgtcccaagtgtaactatgttgtggat
aatattgaccatctgtatcctaatttcttggtgaatgagctcattctcaaacagaaacaa
agatttgaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggccacaga
tggcaaatatttcaggatttgttgggaactgatcaagataaccttgatttggccaatgtc
aacctcatgttggaattactagtgcagaagaagaaacaactggaagcagaatcacatgca
gcccaactacagatccttatggaattcctcaaggttgcaagaagaaataagagagagcaa
ctggaacagatccagaaggagctgagtgttttggaagaggatattaaaagagtggaagaa
atgagcggcttgtactctcctgtcagtgaggatagcacagtgcctcaatttgaagctcct
tctccatcacacagtagtattattgattctacagaatacagccaacctcctggtttcagt
ggcagttctcagacaaagaaacagccttggtataacagcacattagcatcaagaagaaaa
cgactcactgctcattttgaagatttagagcaatgttacttttccacaaggatgtctcgt
atttcagatgatagtcgaactgcaagccagttggatgaatttcaggaatgcttgtctaag
tttactcgatataattcagtacgacctttggctacattgtcatatgctagcgatctctat
aatggttccagcatagtctctagtattgaatttgaccgggattgtgactattttgcaatt
gctggggttacaaagaaaattaaagtctatgaatatggcacagtcattcaggatgcggtg
gatattcattaccctgaaaatgaaatgacctgcaattccaaaatcagctgtatcagttgg
agtagttaccataagaatctgttagccagcagtgattatgaaggcaccgtcatcctatgg
gatggatttacaggacagaggtcaaaggtctatcaggagcatgagaaaaggtgttggagt
gttgactttaatttgatggatcctaaactcttggcgtcgggttctgatgatgcaaaagtg
aagctatggtctaccaacctagacaactcagtggcaagcattgaggcgaaggctaatgtg
tgctgtgttaaattcagcccctcttctagataccatttggcttttggctgtgcagatcac
tgtgtccactactatgatcttcgtaacactaaacagccaatcatggtattcaaaggacac
cgaaaagcagtctcttatgcaaagtttgtgagtggtgaggaaattgtctctgcctcaaca
gacagccagctaaagctgtggaatgtagggaaaccatactgtctccgttccttcaagggt
cacatcaatgaaaaaaactttgtaggccttgcttccaatggcgattatatagcttgtgga
agcgagaacaactctctttacttgtactataaaggactttctaagactttgctaactttt
aagtttgatacagtcaaaagtgttctggataaagaccgaaaagaagatgatacaaatgaa
tttgttagtgctgtgtgctggagggcattgccagatggggagtccaatgtgctgattgct
gctaacagtcagggtacaattaaggtgctggagttggtatga
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