Zalophus californianus (California sea lion): 113932430
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Entry
113932430 CDS
T07874
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03420
Nucleotide excision repair
zca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113932430 (ERCC4)
03460 Fanconi anemia pathway
113932430 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zca03032
]
113932430 (ERCC4)
03400 DNA repair and recombination proteins [BR:
zca03400
]
113932430 (ERCC4)
DNA replication proteins [BR:
zca03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113932430 (ERCC4)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
113932430 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
113932430
NCBI-ProteinID:
XP_027467387
UniProt:
A0A6J2EKI7
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Position
10:80696228..80727013
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AA seq
916 aa
AA seq
DB search
MEPGPPARPTAMAPLLEYERQLVLELLDADGLVVCARGLGADRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLT
DRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRNLFVGKLYLWPRFHAAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKEL
KCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCITFLNLLESLRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDAKMNKKGKMSEK
MEMKEEQETKKELVLESNPKWEALTEVLKEIEAENKESEALGGPGQVLICASDDRTCSQL
REYITIGAEAFLLRLYRKTFEKDSKAEEVWMKFRREDRPKRMAKSNKRPKDPPNKQRAAT
KERTLKKKKRRLTLTQMMQQSEQPEEAGDVKEGYPRDTGSSPESSLEEIKHEEFDLNLSS
DAAYGILKDPLTILHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG
KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEGREGRDEANPDLVRGC
AAAGAPTDTRKAGGQEQSRTPQTIVVDVREFRSELPSLIHRRGIDIEPVTLEVGDYILTP
EMCVERKSISDLIGSLSNGRLYGQCVSMSRYYKRPVLLIEFDPGKPFSLTSRGALHQEIS
SNDISSKLTLLTLHFPRLRILWCPSPHATAELFEELKQNRPQPDAATAMAVTADSETLPE
SEKYNPGPQDFLLKMPGVNAKNCRTLMQHVQNIAELASLSQDKLAGILGNAGNAKQLYDF
IHTSYADVVSKGKMRK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggagccggggccgccggctcggccgacagctatggcgccgctgctggagtatgagcgg
cagctggtgctggaactactggacgcggacgggctggtagtgtgcgcccgcgggctgggc
gcggaccggctcctctaccacttcctccggctgcactgccacccggcgtgcctggtgctg
gtgctcaacactcagccggccgaggaggagtactttatcaatcagctgaagatcgaagga
gtcgaacacctccctcgccgggtgacaaatgaaatcacaagtaacagtcgctatgaggtc
tacacacaaggaggtgtgatatttgcaacaagtcgaatacttgtggtcgacttcttgact
gataggataccttcagatttaattaccggcatcttggtgtacagagctcacaggataatc
gagtcttgtcaagaagccttcatcttgcgtctgtttcgccagaaaaacaagcgtggcttt
attaaagctttcacagacaacgctgtcgcctttgatactggtttttgtcacgtggaaaga
gtgatgaggaatctttttgtagggaagctctatctgtggccaaggttccacgcagcggta
aactcgtttttagaacagcacaaacctgaagttgtagaaattcacgtttctatgacgcct
gccatgcttgctatacagaccgccatactggacattttaaatgcatgtctgaaggagctc
aagtgccataacccgtccctggaagtggaagatttgtctttagaaaatgctattgggaaa
ccctttgacaagacaatccgccattatctggatcctttgtggcaccagcttggagccaag
actaagtccttggttcaggacttgaagatactacgaactttgcttcaatatctctctcag
tatgattgcatcacattccttaatcttctggaatctctgagagcaacagagaaggctttt
ggtcagaattcaggttggctgtttcttgactctagcacctcaatgtttgtaaatgctcga
gcaagggtttaccatcttccagatgccaaaatgaacaaaaaaggcaaaatgtctgaaaaa
atggagatgaaagaagagcaagaaacaaaaaaggaattggtcctagaaagcaacccaaag
tgggaagcattaaccgaagtactgaaagaaattgaggcagaaaataaggagagcgaagcc
cttggtggtccaggtcaagtacttatttgtgcaagcgatgaccgaacatgttcccagctg
agagagtatatcactatcggagcagaggccttcttgctgaggctctacaggaaaaccttt
gagaaggatagcaaagccgaagaagtgtggatgaaatttagacgtgaggaccgtccaaag
agaatggcaaaatctaacaaaaggcctaaagaccccccaaacaaacaaagggctgccacc
aaagaaaggactctgaaaaagaaaaagcgaaggttaaccttaactcagatgatgcaacag
tctgaacaacctgaagaggcaggagatgtcaaggaaggctatccgagagacacaggcagt
agcccagaaagttccttagaagaaattaagcatgaggaatttgacttaaacttgtcctct
gatgccgcatatggaatcctgaaagacccactcaccatcctccatccgctcctgggctgt
agtgacccctatgctctgacgagggtgctccacgaagtggagccaagatacgtggttctg
tacgatgcagaactgacgtttgttcgccagcttgaaatttacagggcgagcaggcccggg
aagcctctgagggtctactttcttatatatggaggttcaaccgaggaacagcgctatctc
actgctttgcggaaagaaaaggaagcttttgagaaactcataagggagaaggccagcatg
gtggtccctgaaggaagggaaggtagggacgaagcaaatccggacctggtcaggggctgc
gcagctgcaggtgctcccaccgacacccggaaagcaggcggccaggaacagagccggacg
ccgcagactatagtcgtggatgtgcgtgagtttcgcagtgaactgccgtccctgatccac
cgtcggggcatcgacatcgaacctgtgactctggaggtcggagactacattctgaccccg
gaaatgtgcgtggagcgtaagagcatcagcgacctgattggctcgttaagcaacggccgc
ctatacggccagtgcgtctccatgtcccgctactacaagcgcccggtgctgctcatcgag
ttcgaccccggcaagcccttctccctcacgtcccggggcgcactccatcaggagatctcc
agcaacgacatcagctccaaactcaccctcctcacgctccacttccccagactccggatt
ctctggtgcccctcccctcacgccaccgccgagctgttcgaggagctgaagcagaacagg
ccacagcccgatgcggccacggccatggccgtcacagcggattcggaaacgctcccggag
tcggagaagtacaatcccggcccccaggacttcttgttaaagatgccgggggtgaatgcc
aagaactgtcgcaccttgatgcagcacgtgcagaacatcgcagagctcgccagcctgtcg
caggacaaactggcaggtattctgggcaacgccgggaatgccaagcagctctatgacttc
attcacacctcttacgcagacgtcgtgtctaaggggaaaatgagaaaatga
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