Zalophus californianus (California sea lion): 113933609
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Entry
113933609 CDS
T07874
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04820
Cytoskeleton in muscle cells
zca05410
Hypertrophic cardiomyopathy
zca05412
Arrhythmogenic right ventricular cardiomyopathy
zca05414
Dilated cardiomyopathy
zca05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113933609 (SNTB1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
113933609 (SNTB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
113933609 (SNTB1)
05414 Dilated cardiomyopathy
113933609 (SNTB1)
05416 Viral myocarditis
113933609 (SNTB1)
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Gene cluster
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
DUF7528
Motif
Other DBs
NCBI-GeneID:
113933609
NCBI-ProteinID:
XP_027469715
UniProt:
A0A6J2EL56
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Position
4:complement(171856301..172086269)
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AA seq
575 aa
AA seq
DB search
MAVAAAAAAAAGPSGGGGGRAPRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAAYNG
IGTATNGSFCRGAGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQELGGLGIS
IKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQALKRAGKE
VLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGAGSSDALSSQPCSFHRDRKNIPL
KMCYVTRSLASADPENRLPSCPALTCRAQAERMASSHRKSTSSLQKHFSQHPTRKTDYSR
QLEIHSPDAKHTVILRSKDSATAQAWFSAIHSNVSDLLTQVIAEVREQLGKTGIAGSREI
RHLGWLADKVPGESEKQWKPALVVLTEKDLLIYDSMPRRKEAWFSPVHTYPLLATRLVHS
GPGKGSPKAGVDLSFATRTGTRQGIETHLFRAETSRDLSHWTRSIVQGCHNSAELVTEVT
TACTYKNQECRLTIHYENGFSITTEPQEGAFPKTIIQSPYEKLKMSSDDGIRMLYLDFGG
KDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcggcggcggcggcggcagggccgagcggcgggggaggcggccgg
gcgccgcggagcgggctgctggaagttttggtgcgggatcgctggcacaaagttctggtg
aacttgagcgaggacgccctggttctgagctgcgaagagggcgccgcggcgtacaacggc
atcgggaccgccaccaatggctcgttctgcaggggcgccggcggcgcgcagcccccggac
tcgcccgccggggtccgcaccgccttcaccgacctgccggagcaggtgcccgagtccatc
tccaaccagaagcgcggcgtgaaggtgctgaagcaggagctgggcgggctgggcatcagc
atcaaggggggcaaggagaacaagatgcccatcctcatcagcaagatcttcaaggggctg
gcggcggatcagacccaagccctgtacgtgggcgacgccatcctgtctgtgaacggggcc
gacctgcgggacgccacccacgacgaggcggtgcaggcgctgaagcgcgccggcaaggag
gtgctgctggaagtgaagtacatgcgagaagccacaccctatgtgaagaaaggctcccca
gtatcagagattggctgggaaacacctccgccagaatcccctcggttaggggccgggtcc
tcagatgccttgtcatcacagccgtgctccttccacagagatcggaagaacatccccctc
aagatgtgctatgtcacccggagtctggcctctgctgaccctgagaacaggttgcccagc
tgtcccgcattgacctgcagagcccaagcagagaggatggcttccagccacaggaaatcc
acatccagcctgcagaagcatttcagtcagcatccaaccaggaaaacagactactctagg
cagcttgaaatccactctccagatgctaagcacacagtgatcctaaggagcaaggattca
gccactgcccaggcctggttcagtgccatccattccaatgttagtgacctgctgacccaa
gtgattgctgaggtcagagagcagctggggaaaacaggcattgctgggagccgagagatc
aggcatcttggctggcttgcagataaggtgcccggggagagcgagaagcagtggaagccg
gcactggtcgtactgactgagaaggaccttttaatctatgacagcatgccgcggaggaag
gaagcctggttcagcccagttcacacgtaccctcttcttgccaccaggctggtccattca
ggtccaggcaaaggatcgcccaaggctggtgtggatctgtccttcgcgacacgaacaggc
accaggcaggggattgaaacacacctgttcagggccgagaccagcagggacctctcccac
tggacgaggagcatcgtgcagggctgccacaactcggcggaactggtcaccgaagtcact
accgcttgcacctacaaaaaccaggagtgccgcctgaccatacattatgagaatggattt
tctattaccactgaaccacaggagggtgcctttcccaagacaatcatacagtctccctat
gaaaagctgaaaatgtcctcagatgatggaatcaggatgctgtacttagattttggaggc
aaagatggagagattcaactagaccttcattcctgccccaagccgattgttttcatcatt
cactccttcctgtccgcgaagatcacaagactgggcttggtggcctga
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