Zalophus californianus (California sea lion): 113934573
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Entry
113934573 CDS
T07874
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113934573 (SNAPC4)
03021 Transcription machinery [BR:
zca03021
]
113934573 (SNAPC4)
Transcription factors [BR:
zca03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
113934573 (SNAPC4)
Transcription machinery [BR:
zca03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
113934573 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
113934573
NCBI-ProteinID:
XP_027471643
UniProt:
A0A6J2F1G9
LinkDB
All DBs
Position
13:1335277..1356424
Genome browser
AA seq
1599 aa
AA seq
DB search
MSPLLFPALGPAAASRTGAPVDAGDPAPRGRPSRRHTCHLRPRALRRAAGFGFPRAWAAS
LCPGASATTPRRVGPRCPAGPGKAETRLWGHAGARPAAPWQVEVMDVDAEREKIAKEIAE
LERILDPTSSGVGVGVSESGLPLDSDADSLPEEDSEATGSPGSEEERWGEASNGEDDPKE
KTLPEDPETCLQLNMVYQEVIQERLVEVSLLLAQNQEQQEEIMCDLAGSKGSKVKDSKSL
PPNLYVGHFMKPYFKDRVTGVGPPANEETREKAAQGIKAFEELLVTKWKNWEKALLRRSV
VSDRLQRLLQPKLLKLEYLHQKRSRVTSEAERQVLEKQSREAEREVQDIRQLPEEALLGN
RLDSHDWEKISNVNFEGGRSAEEIRKFWQNFEHPSINKQEWSGQEVDQLKALAAEHGHLQ
WQKIAKELGTNRSAFQCLQKYQQHNKALKRKEWTREEDRLLTQLVQEMRVGSHIPYRRIV
YYMEGRDSMQLIYRWTKSLDPSLKKGFWAPEEDAKLLQAVAKYGEQDWFKIREEVPGRSD
AQCRDRYLRRLHFSLKKGRWNASEEGKLLELIEKYGVGHWAKIASELPHRTGSQCLSKWK
IMVRKKQSRGRRRRRRPLGSMRWSSSSGDSSSGDGSSGGGSSGGGSSGDSEPEEAPEARA
GGQALPSAQHTVPDMDLWVPARQSTSELCAGGARGWPGHRAASPSPPRASSEAQDSRAAG
PTASASAEEAGQTHTPSGTHSTSARGIGHPGSADTHLSSSEELADKGPTVHQPCVCLSRS
ASELSGPWPPPWLWLCAELRPCTRASHVSSLTPSFRQSGSCLLKVPLETVLQVLRTNTAR
RRQTLKEKLRQPCPLSPSLGASPSDSGVAGPHVRRLWHRTIGNRRQWRGHALQRRLIERQ
LLVAMSPWVGDVVLPCTPRRPAVVHTRADGIRKQLQDARLASTPAFTVFIQLFQIDTAGC
MEVVRERKAQTPALLQTGTRDPVPGLLQMSSLRDSPGRSFRNPPAREAVKQSTSHKGSRG
LQLCRAESSPPAPPPAPCGPRPKPKTVSELLREKRLREARARKAATPGTVALPPQLVLSS
PLILQPRLPQPPPTRSAPGPAATDTALSGPGIPAAAGLSTSGKDERASTLPVLDRTLAST
EAAPAASRAPVPSRVLVSGHQGGLGQSQAPATSRKQGLPEAPLFLPAAPSPIQLPIQPLS
LTPALGMHKGGPHVAASTPLPVTWVLTAQGLLPVPAVVGLPGAAGTSDAKGLSVTLPSSL
PGMRVGQGPRLPGLSHPWQPPANMDTDSDSSSRADLSTLPMLCQSQSSVEVGSDVARVPG
GPSFPGEAQVAREIAAPRIPSQATLLADHPEAKPPWSSQPPLQAGTSPGSGPGGTPGSPG
PGRPMGPLGLERPPLPRPGPERGALDLDLLSQESEAAVRDWLRGQQGVCVPPLGSRLPYQ
PPALCSLRALSGLLLHKKALEQRATSLVPSGAAGALQASLGQVRRQLQDSPAYLLLKARF
LAAFTLPALLATLSPHGVHTTLSVATRAEPESEDDLGELELTDGCSTSGPWAGPAATIPV
QGAPDPGQSADSSCLDGSDNLDVLRTRHAWHVRKRRRLV
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccttctgttcccggccctcggccccgccgcggcctcccggaccggcgcccct
gtagacgcgggggaccctgccccccgggggcggccttcccggcgccacacctgccacctg
cgtccccgtgccctccgccgtgctgctgggttcgggtttcccagggcctgggccgcgtcc
ctgtgccctggtgcctcagccacgacaccccgccgtgtcggccccaggtgcccggccggg
ccggggaaggcggagaccaggctctggggccatgccggtgcccgtccggctgccccctgg
caggtagaagtcatggacgtagacgccgaaagagagaagatagcaaaggagatcgcggag
cttgagaggattttggatcccacgtcctcgggcgtcggagtgggggtctcggagtctggt
ctcccgttggattctgacgcagattcactgccagaggaggactcggaggctactggttcc
ccaggctcggaagaggagaggtggggtgaggccagcaatggtgaggatgaccccaaggaa
aagacccttcctgaagacccagagacctgcctgcagttgaacatggtctaccaggaggtc
atccaggagaggctggtggaggtcagcctcctactggcccagaaccaggagcagcaggag
gagatcatgtgtgacctggcagggtccaagggctccaaggtgaaggacagcaagagcctg
cccccgaatttgtacgtagggcacttcatgaaaccctacttcaaggacagagtgaccggg
gtggggcctcctgccaatgaagagacgcgggagaaggctgcccagggcatcaaggctttc
gaggagctcttggtgactaagtggaaaaactgggaaaaggccttgctccgaagatcagtg
gtgagcgaccgcctgcagcgcctgcttcagcccaagttactgaagcttgagtacttgcac
cagaaacggagtagggtgacgagtgaggcagagaggcaggtcctggagaagcagagcagg
gaggcggagagggaagtccaggacattcggcagctcccagaggaggccttgctgggcaac
aggctggacagtcacgactgggagaagatctcgaacgttaactttgagggtggccgcagt
gcggaggagatccggaagttctggcagaacttcgagcacccgagcataaacaagcaggag
tggagcgggcaggaggtagaccagctgaaggcccttgcggctgagcatggccatctgcag
tggcagaagatcgccaaggagctggggaccaaccgcagcgccttccagtgcctgcagaag
taccagcagcacaacaaggctctgaagcgcaaggagtggacacgggaggaggaccgcctg
ctcacccagcttgtccaggagatgcgcgtcggcagccacatcccctaccggagaattgtc
tactacatggaagggagagactccatgcagctcatctatcggtggaccaagagcttggac
cccagcctgaagaaggggttctgggccccagaggaagacgcgaagttgcttcaagcagtt
gccaaatatggggagcaggattggtttaaaatccgggaagaggtgccaggtaggagcgat
gcccagtgccgagatcggtacctcagacggctgcacttcagcttgaaaaagggacgatgg
aacgcaagtgaagaggggaagctgcttgagctgatcgagaagtacggtgttggtcactgg
gcaaaaatagcttctgaactaccccatcggacgggctcccagtgtctgagcaagtggaag
atcatggtcaggaaaaagcagagtcggggcaggaggcggcggcggcggccccttggcagt
atgcggtggagctccagcagcggggacagcagcagcggggacggcagcagcgggggcggc
agcagcgggggcggcagcagcggggactcagagccagaggaagccccagaggccagggca
ggtggccaggcgctgccgtcagcacagcataccgtgccggacatggacctgtgggtgcct
gccaggcagagcaccagtgagctgtgcgcagggggagcccggggctggccaggacaccgt
gccgcctcccccagccctccccgggcctccagcgaggctcaggacagcagagctgctggc
cccacagcctcggcttccgcagaggaggcaggccagacgcacactccctccgggacccac
agcaccagcgcgagaggcatcgggcacccaggctcggcggacacgcacctctcgagctca
gaggagctggcagacaagggtcccactgtccaccagccctgtgtatgcctgtcccggtcg
gcgtctgagctctcagggccctggccacctccctggctctggctgtgtgcggagttgcgc
ccctgcaccagggcttcccacgtgtccagcctcacgccgtcttttcgtcagagtgggagc
tgtctgctgaaggtgccactggagacagtgctgcaggtgctcaggaccaacacagcccgc
cggcgccagacgctgaaggagaaactgagacaaccgtgcccactcagcccgtccctgggg
gccagccccagtgacagtggtgtggccgggccccatgtacggcggctgtggcacaggacg
atcgggaacaggcggcagtggcgaggacatgccctgcagaggaggctcattgagcgccag
cttctggtggccatgagcccgtgggtgggcgacgttgtcctgccctgcaccccccggagg
cctgccgtcgtgcacactcgagccgatggcatcaggaagcagctgcaagacgcccggctg
gccagcacccctgcgtttactgtttttatccagctgttccagattgacactgctggctgc
atggaggtcgttcgagagaggaaggcccaaacccctgccctgctccagactggcactcgg
gacccagtgcctgggctcctacagatgtcttcgttgcgggactccccaggccgcagcttc
cggaatccaccggcacgagaagctgtaaagcagagcaccagccacaaagggagcaggggt
ttacagctctgccgtgccgagtccagtccaccggcgcccccgccagctccgtgtggccct
cggcccaagcccaagaccgtctccgagctgctccgggagaagcggcttcgggaggcccgg
gccaggaaggccgctaccccaggcaccgtggctctcccaccgcagctggtgctgtcctcg
ccactgatcctccagccccgtctaccacagccgccccccacccgctcagccccgggcccc
gctgccacagacacggcgctctctgggcctgggatccctgcagcagcggggctgagtact
tcaggcaaggacgagagggcttcgaccctgccagtcttggaccgcaccctggcctccacg
gaggctgcccctgctgcctccagagctccagttcccagccgggtccttgtgagtggccat
cagggtggcctgggacagtctcaggcccctgccacgtcccggaagcagggcctgcctgag
gcaccactctttctcccagcagcccccagccccattcagctgcctatccagcccctcagc
ctgacaccagctctgggcatgcacaagggtgggcctcacgtggcggccagcacgcctctg
cctgtcacctgggtgctcacagcccaggggctgctccctgtgccagccgtggtgggcctt
cctggggcggcagggacctctgatgccaagggactgtccgtgactctgccgtcctccctg
cctgggatgcgggtaggccagggccccaggctccctgggctgagccacccctggcagccc
ccggccaacatggacacagactcagattcttcctccagggcagacctctcgacccttccg
atgctttgccaatcccagagttctgtggaagtgggcagtgacgtggcccgtgtccctggg
ggaccttccttccctggagaggcccaagtggccagggaaatagctgcgcccaggataccc
tcccaggccacactcctggctgaccaccctgaagcaaaacccccgtggtccagccaaccc
cctctgcaagctggcactagccctgggagtggcccaggagggacaccggggtccccgggg
ccagggcgacccatgggacctctgggcctagagaggccacccctaccccggcctgggcct
gagaggggtgccctggacctggacctcctgtcccaggagagtgaggcagccgtgcgggat
tggctgaggggacagcagggggtgtgcgtgcccccgctagggagcaggctgccctaccag
cccccagccttgtgcagcctacgggccctgtctggactcctgctccacaagaaggctttg
gagcagagagccacctccctcgtgcccagtggggcagccggagccctgcaggcctcgctg
ggacaggtgcggaggcagctccaggacagcccggcctacctgctgctgaaggctcggttc
ctggcagccttcaccctccccgcactcctggccacgctgtctccccacggcgtccacacc
accctgtcggtggccacaagggccgagccagagagcgaggacgacctgggggagttggag
ctcactgatggctgctccacaagtggtccttgggcagggccggcagccaccatccccgtt
cagggagccccagaccctgggcagagcgctgactcttcctgcctggatggttctgacaac
cttgacgtgctgagaacccggcatgcctggcatgtccggaagaggaggcggctggtgtga
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