Zalophus californianus (California sea lion): 113934594
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Entry
113934594 CDS
T07874
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113934594 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zca03009
]
113934594 (POP1)
03016 Transfer RNA biogenesis [BR:
zca03016
]
113934594 (POP1)
03029 Mitochondrial biogenesis [BR:
zca03029
]
113934594 (POP1)
Enzymes [BR:
zca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
113934594 (POP1)
Ribosome biogenesis [BR:
zca03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
113934594 (POP1)
Transfer RNA biogenesis [BR:
zca03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
113934594 (POP1)
Mitochondrial biogenesis [BR:
zca03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
113934594 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
113934594
NCBI-ProteinID:
XP_027471728
UniProt:
A0A6J2F1R7
LinkDB
All DBs
Position
4:152941705..152977417
Genome browser
AA seq
1019 aa
AA seq
DB search
MSNAKERKHAKKMRNQPTNVTLSSGFVAERSTKYHNGGGRPFQAQKQEPFSGTSRQRQTK
MTHHSPVDSDVKEQSSSKIMFKKKGGWKAGPEGTSQEIPKYITASTFAQARAAEISAMLK
AVTQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLQEIAQKEAEKAVHQKKEHSKNKCHK
ARRCHKKWVLEFNRRQKKNIWLETHIWHAKRFHMVKKWGYCLGERPTVKSHRACYRAMTN
RCLLQDLSYYCCLELKGKEEEILKALSLMCSIDAGLTFAAVHCLSGKRQGSVLLYRANKY
PREMLGPVTFIWKSERIPGHTSESRQLWIWLHPTLKQDILEELKAACQCVEPIKSAVCIP
SLLLTTSEEKSQTVLPDEKIGKKRKWKDDGENAKPVKKVIGDGTRDPHQPSSWISPATGI
IISDLTMEMNRLRLIGPLSHSILTEALKAASVQTVREGEDTEKIPHHWWIETCKNPDSVS
LHHRQEAVFELLGGITSPAEIPAGTILGLTVGDPRVNLPQKRSKVLPNPEKCQDNEKVRQ
LLLEGVPVDCAHSFIWNQAICKNVTENKISDQDLNRKRSELLVPGSQLALGPQESRIPIL
LIQQPGKVTGDERRGWGSGWDVLLPKGWGMAFWIPFIYRGARVGGLKESVVHSQYKRSPD
IPSDFPDCPAGVVFAEEQAKNLLEKYKRRPPAKRPNYVKLGTLAPFRCPWEQLTQEWESR
VRSQEKSSGASSPSGEESDSRRDKLPCTPTPENTDLRSGEGGTSQSSSSKPRDGVATECP
ARLGTGWVAGQDATGSLPCVLRSRKWLKQLSTWCGPSSGDRRAARRALGSGQPAPTRAAC
LSLLDRFPRALVWVSLALLRKGSPEPHSMICVPAEEDIFQLRQDRLYSGPQEPKHSDPFK
SEIRKQKERNKVEKRQNQAQAEPEGLAGAHPAAGHPALTLGLWSGPLPVVTSHCSRVVLG
FVTQGDFSMAVGGGEGLGFVSLTGLLDMLSGQPAAERGLVLLRAPASLQYRFARMAVEV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaaaagaaagaaaacatgctaagaaaatgagaaaccagcccactaatgtg
actttatcttctggctttgtggctgaaaggagcacaaagtaccataatggaggtgggaga
cctttccaagctcaaaaacaagagcctttttctggaacttcacgacagcggcaaaccaaa
atgacccaccattccccggtcgattctgatgtgaaggaacagtcttcctccaaaataatg
tttaaaaagaagggaggatggaaagcaggtcccgagggcacgtctcaggagattcccaag
tatataactgcttctacttttgctcaagcccgagctgctgaaatcagtgctatgttgaaa
gcagtgacccagaagtcttctaattcgctggttttccagaccctgccccggcacatgaga
cggagagccatgagccacaatgtcaagcgccttcccaggcggttgcaggagattgcccaa
aaagaggccgagaaagcagtacatcagaaaaaagaacattcaaagaataaatgccataaa
gctcgaagatgtcacaaaaaatgggtgctagaatttaaccgtagacaaaagaagaacata
tggttagaaactcacatctggcacgccaagcggtttcacatggtcaagaagtggggctac
tgccttggggagaggccgacggtgaagagccacagagcctgctaccgagccatgacaaac
cgttgcctccttcaggatttatcctactactgttgtttggagttgaagggcaaagaggaa
gaaatactgaaggcactttctctgatgtgtagcatagatgcaggactgacttttgcggca
gttcactgcctgtctgggaagcgccaaggtagcgtcctgctttatcgggcaaacaaatac
cctcgagagatgttggggcctgtcacatttatttggaagtctgagaggatccccggtcac
acttctgagagcaggcagttgtggatctggcttcatccaacgcttaaacaggatatttta
gaggaactcaaagcagcgtgccagtgtgtggaacccatcaaatcagccgtctgcatcccc
agcctcctgctgacaacatccgaagaaaaaagccaaactgtactgcctgatgaaaaaatt
ggcaagaaaagaaaatggaaagatgatggagaaaatgctaaacctgttaaaaaagtcatc
ggtgatggaactagagatccacatcaaccatcttcttggatctctccagctacaggcatt
ataatcagtgatttgacgatggagatgaacaggctccggttgatcggtccactttcccac
tccatcctgactgaggcgctaaaagctgcttctgtccagaccgtaagagagggagaggac
acagagaagatacctcaccactggtggattgaaacctgtaagaatcctgatagcgtttcc
cttcatcacagacaagaagccgtttttgagttgttgggaggaataacatcacccgcagaa
attccggccggtactattttgggactgacagttggggatcctcgagtaaatttgcctcag
aagaggtccaaagttttgcccaatccagaaaaatgccaagataatgagaaagttagacag
ctgcttctggagggtgtacctgtggactgtgcgcatagctttatttggaaccaagctatc
tgtaagaatgtcacagagaataaaatctcggatcaggatttaaaccggaagagaagtgaa
ttgctggtgcccgggtcgcagcttgctctaggtccccaggaatccaggatacctatcctt
ctgattcagcagccaggaaaggtgacgggtgatgagcgacgaggctggggaagcggctgg
gacgtcctgctcccaaagggctggggcatggctttctggattccatttatctatcgaggc
gcaagagttggtgggttaaaagagtctgtggtgcattcacagtataaaaggtcacctgac
attcccagtgatttcccagactgccccgctggggttgtgtttgctgaagagcaagccaag
aatctccttgaaaagtacaaaaggcgccctcctgcaaaacggcccaactatgtgaagctt
ggcaccctggcacctttccgctgtccctgggaacagttaactcaggagtgggagtcaaga
gtcaggtcccaagagaaatcctctggagcctcttctccaagtggcgaggagagtgactcg
aggagagacaagttgccttgcactcccacacctgagaacacggatctgcggtctggtgaa
gggggaacatctcagagcagctccagcaagccccgagatggggtggccacggagtgcccg
gcccggctggggactgggtgggtagcgggccaggatgccaccggcagtctcccctgcgtt
ctgcggagtaggaaatggctgaagcagctgtcgacctggtgtgggcccagctccggggac
aggcgggcagcccggcgggctcttggcagcgggcagccagcaccaaccagagcggcctgc
ctgtccctcctggaccgcttccccagggccctggtgtgggtcagcctggccttactgagg
aagggcagccccgagccgcactccatgatctgtgtcccagccgaggaggacatcttccag
cttcgtcaggatcggctgtactctgggccccaggaacccaagcacagcgaccccttcaag
agcgagatccggaagcagaaagagaggaataaggtagagaagaggcagaaccaggcgcaa
gctgagcctgagggtctggctggggcgcaccctgcagccgggcacccagctctgaccctg
ggcttgtggtcaggccccctcccggtggtgacttctcactgctcccgagttgtccttggc
tttgtcacgcagggagacttttccatggccgtcggcggcggagaaggcctggggtttgtt
agcttgacgggcttgctggatatgctgtccggccagccggcagcggagaggggccttgtg
ttgctgagggcgcccgcctccctgcagtatcggtttgcgagaatggccgtggaggtgtga
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