Zalophus californianus (California sea lion): 113934752
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Entry
113934752 CDS
T07874
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zca02000
]
113934752 (TMC1)
03037 Cilium and associated proteins [BR:
zca03037
]
113934752 (TMC1)
Transporters [BR:
zca02000
]
Other transporters
Pores ion channels [TC:
1
]
113934752 (TMC1)
Cilium and associated proteins [BR:
zca03037
]
Other cilia and associated proteins
Stereociliary proteins
113934752 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Ac76
Toddler
Motif
Other DBs
NCBI-GeneID:
113934752
NCBI-ProteinID:
XP_027472074
UniProt:
A0A6J2ET21
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Position
13:complement(80470485..80620616)
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AA seq
761 aa
AA seq
DB search
MPPKKVQIQVEEKEDDTEESSSEEEEEEEDKLPRRESLRPKRKRTRDVINEDDPEPEPED
EETRKAREKERRRRLKRGAEEEEEINEEELERLKAELDEKKQMIATVKCKPWKMEKKIEV
LKEAKKFVSENEGALGKGKGKRWFAFKMMMAKKWAKFLRDFENFKAACIPWENKIKAIES
QFGSSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAAN
FGVLYDFNGLAQYSVLFYGYYDNKRTIGWMNFRLPLSYFLVGLMCIGYSFLVVLKAMTKN
IGDDGGGDDNTFNFSWKVFTSWDYLIGNPETADNKFNSITMNFKEAIIEERAAQVEENVH
LIRFLRFLANFFVFLTLGGSGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMF
CPTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANI
TLWEANMIKAYNASLTGNSTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTI
LIGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPG
INILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLP
PSFDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAIILIMVLTIYYLNAT
AKGQKAANLDLKKKMKQQALENKIRNKKMAAARAAATAGGQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaagaaagtgcaaattcaagtggaggaaaaagaagatgacacagaagaaagt
tcaagtgaagaggaagaggaggaggaagataaactacctcgaagggagagcttgagaccg
aagaggaaacggaccagagatgttatcaatgaggatgacccggaacctgaaccagaggat
gaagaaacaaggaaggccagagagaaagagcgaaggaggaggctgaaaagaggagcggaa
gaagaagaagaaattaatgaagaggaattggaaagactgaaggcagagttagatgagaaa
aaacaaatgattgctactgtcaaatgcaagccttggaaaatggagaagaaaattgaagtt
ctcaaagaagcaaaaaaatttgtgagtgaaaatgaaggagcccttgggaaagggaaagga
aagcggtggtttgcatttaagatgatgatggccaagaaatgggcaaaatttcttcgtgat
tttgaaaacttcaaagccgcctgcatcccatgggaaaataaaatcaaggcaattgaaagt
cagtttggctcctctgtggcctcatacttcctcttcttgagatggatgtatggagtaaac
atggttctcttcatcctgacattcagcctcatcatgttgccagagtacctctggggtttg
ccatatggcagtttacctaggaaaacagttcccagagctgaagaggcatctgcggcaaac
tttggtgtgttgtacgacttcaatggcttggcgcaatattccgtcctcttttatggctat
tatgacaataaacgaacaattggatggatgaatttcaggctgccgctctcctattttctg
gtggggctcatgtgcatcggatacagctttctggttgtccttaaagcgatgaccaaaaat
attggggatgatgggggtggtgatgacaatacattcaacttcagctggaaggtattcaca
agctgggactacctgattggcaatccggaaacagcagacaacaaattcaattctatcacc
atgaactttaaggaagcaatcatagaggaaagagcagcccaagtagaagaaaacgtccac
ttgatccgattcctgaggtttcttgctaacttcttcgtgtttctaacacttggaggaagt
ggatacctcatcttctgggctgtgaagcgatcccaggaatttgcacagcaagatcctgac
acccttgggtggtgggaaaagaatgaaatgaacatggtcatgtccctcctggggatgttc
tgtccaacactgtttgacttatttgctgaattggaagactaccatcccctcattgctctg
aaatggctactgggacgcatttttgctctacttttaggcaacttgtatgtatttattctt
gccttgatggatgagattaacaacaagattgaagaggagaagctggtgaaggccaatatt
accctctgggaagccaacatgatcaaggcctacaatgcatcactcacgggaaatagcact
gggccacctttttttgtgcaccctgcagatgtacctcgaggaccctgctgggaaacaatg
gtggggcaggaatttgtgcggctgaccgtttctgatgttctgaccacttatgtcacaatc
ctcattggagactttctccgggcatgttttgtgaggttttgcaattattgctggtgctgg
gatttggaatatggatatccctcatacactgaatttgatatcagcggcaatgtcctcgct
ctgatcttcaaccaaggcatgatctggatgggctccttcttcgcccccagcctcccagga
atcaatatccttcgactccacacctccatgtacttccagtgctgggccgtgatgtgttgc
aacgttcctgaggccagggtcttcaaagcttccagatcgaataacttctacctgggcatg
cttctgctcatcctgttcttgtccaccatgcccgtcctgtacatgattgtatcgctcccg
ccatcttttgattgtggccccttcagtggtaaaaataggatgttcgaagtcattggagaa
acgctggagcatgatttcccaagctggatggcaaagatcttgagacagctttctaaccct
ggactggtcatcgctatcattttgattatggtcttgaccatttattatctcaatgctact
gcaaagggccagaaggcagcaaatctggatctaaaaaagaagatgaaacagcaagctttg
gagaacaaaatacgcaacaagaaaatggcggctgcccgagcagctgcgactgctggtggc
cagtga
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