Zalophus californianus (California sea lion): 113934937
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Entry
113934937 CDS
T07874
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04512
ECM-receptor interaction
zca04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113934937 (FREM1)
04518 Integrin signaling
113934937 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
zca04091
]
113934937 (FREM1)
Lectins [BR:
zca04091
]
C-Type lectins
Lecticans
113934937 (FREM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Cadherin_5
Motif
Other DBs
NCBI-GeneID:
113934937
NCBI-ProteinID:
XP_027472376
UniProt:
A0A6J2EVV2
LinkDB
All DBs
Position
13:53836214..54012075
Genome browser
AA seq
2157 aa
AA seq
DB search
MSALTWGGPCALPLLLLLGWAGATFISLNRGLRLLKGSSAYLSGDDLKFAIPKEKDACKV
EVVMNEPMTQRVGKLTPQVFDCHFLPNEVKYIHNGCPILDEDTVKLRLYRFTETDTFTET
FILRVFLLEPDCNIIRRSNNVLEVSEFYGLSRAIDKNLLRFDYERTAGLECTVRLDPVGS
RLPAHGQMVLLEPRPEKPRGDQPHSFFPESHLGTELRCPGGSCALGLKKMGSVNVSCEEF
LLMGLRYQHTDPPSPNIDYISIQLDLTDGRSKIVYKSESAWLPVYIRAGFPNQIPRAAFM
AMLILEVDQFILTSLTTSVLDCEEDETPKPLLVFNVTKAPPQGYVTHLWDHTRPVSSFTW
KDLSDMQIAYQPPNSSYSARRHYEVEVEVYDFFFERSAPITVHISVRTADTNAPRVSWNT
GLSLLEGQSRAITWEQFQIVDNDDIHAVQLVTVGGLQHGRLTLRGGKGFLFTVADLQAGV
VRYHHDDSDSTKDFVIFRIFDGHHSIRHKFPINILPKDDSPPFLISNIVIELEEGQTILI
QGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPGPGLIGYPVSGFLQRDLFNGIIYYRH
FGGEIFEDFFEFVLWDSHEPPNLSVPQVVTIHITPVDDQVPKEAPGVSRHLVVKETEVAY
ITKKHLHYIDTEYDRELLYMITTPPFFSFGHRHLDAGKLFTVDSIPKLTKNPAAPGLRSF
TQHAVNHMKVAYMPPLQDIGLHPQHVQFAFSISNQHGGTLHGICFNITILPVDNQVPEVF
TNPLRVTEGGQCVISTENVLVSDVDTKLDNICLSLQRLPQCGRVELDGFPLNTGGTFSWG
DLRALKVRYQHDGSERLQDDIFLEVTDGTNSAEFVLHVEVFPVNDEPPILKADLIPMMHC
SEGEEVVITSEYILATDVDSDDLKLMFVIAREPQHGVVRKAGVTVDQFSQGDVISGAVTY
KHTGGEIGLVPCFDAITLVVSDGEAGPSVNGCCYNGPHPSVPLHESFPVYDLNITVHPVD
NQSPSIAIGTMFVVDEGFSAAVTINHLSATDPDTAADDLEFVLVSPPQFGYLENTLPSAG
FEKSNMGISIASFRWKDMKALHINYVQAKHLRMEPTADQFMVYVTDGKRRSLEIPFYVII
NPTNDEAPDFVVQNITVCEGQMKELDSSIISAADLDVPKDALLFSITHKPRHGLLINGVL
SKDFPQNKQPVNPGQKHELVQNFSLELLKNGLKLMYVHDDSESLADDFTVQLSDGKHKIL
RTISVEITPVNDEKPMLSKKAEITVKMGETRIISSAILSAIDEDSPREKIDYLFERLPQN
GQLQLKIGRNWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSQDRDSFTFYLWDGDNRSPAF
DCHITIKDMGKGDIVILVKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPRYGQ
VEYVRYPGVPITSFSQMDIAGQTVCYVHKSKAAVSRDTFRFLVSNGLQTKHGVFEITLET
VDRALPVVTRNRGLRLAEGATGLLSPDLLQLTDPDTPAEKLTFVLAQLPQQGQLYVRGTE
LLQHNFTQQDVDSRDVAYRHLGGDSRIDCFTFVATDRTNQGFVVDGRVGQEPVSFTIQVD
QLDKTAPYITHLHSPSQVGLLKNGCYGIYLTSHVLKASDPDTDDDLIIFKILRGPQHGHL
ENTTGEFIHEKFIQKDLNSKTILYIINPSLEVNSDIMEFQIMDPTGNSATPQILELKWSH
IEWSQTEYEVCENVGMLPLEITRRGYSMDSAFVSVKVNQVSATVGKDFTLTPSTLIQFDP
GMSTKMWNIAITYDGLEEDNEAFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPSHSFN
PNQHNAQEKGIWYPLSPGSSSPTTSGSFHLERRPLPSNKQPAVTRGDNQQGFESPDVSRM
KLRTRGNGKMVLPSSVHRNGTDIIYNLEEDGSPSHKRKAKVSIIRQPQKTSKEAELPQAD
KDPLPSFPKNCTLELKGLFHFQESLRKLYKCDGVTWKAWSPQSEEVEGKSCPAGWHHHSG
YCHSLITEQKVTWNTAARACKEHHLGSLVTVLSRRHMRWLWDISGGKPFWIGLNDQVRAG
HWEWIGGEPVTFTNWRKGPPQRLKRGKNCVLAQRQGKWQTQDCRKGKAHNYVCSRKL
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctctgacctggggtgggccctgtgctttgcccctgctgttgctcctaggctgg
gccggtgccaccttcatcagccttaaccgtgggctcaggctgctgaagggcagctctgcc
tacctgtcgggagatgacctgaagtttgccatccccaaagaaaaagatgcttgcaaagtg
gaagttgtgatgaacgagccaatgactcaaagggttgggaaactcaccccacaggtcttt
gactgccatttccttcccaatgaagtaaagtatattcacaatggttgcccgattcttgat
gaagacacagtgaagcttagattatacagatttactgagacagataccttcacagaaacc
tttatcctgcgggtctttctcctggaacctgactgtaacatcatccgtaggagtaacaat
gtcctggaggtgtctgaattctatggcctgtccagagccattgataagaacctgctcaga
tttgattatgagaggacagccggcctagagtgtacagtcaggctggatcctgtgggaagc
cggctgccagcccatggtcagatggtcctgctggaacctcggccagaaaaacctcgtgga
gatcagccacacagttttttcccggagtctcacctgggaacagagctgagatgtccaggt
ggaagctgtgccctgggactgaagaaaatgggaagtgtcaatgtgagctgtgaggagttc
ttgttgatggggcttcgttatcaacacacggatcccccttctcccaacattgactacatc
tctatccagctggacctcacagatggcaggagcaaaattgtatacaagtcagagagtgcg
tggttgcccgtctatatcagagctggctttcctaatcagattccaagggccgcgttcatg
gccatgttaattctggaagtggatcagttcatcctgacctccttgactacatccgtcctg
gactgtgaagaggatgagacccctaagcccttgctggtgttcaacgttacgaaagccccg
ccccagggctacgtgactcatctgtgggatcacaccagaccggtctcctcgttcacctgg
aaagatctgagtgacatgcagatagcctaccagccaccgaacagcagctattctgcgcgg
agacattacgaggtggaggtggaggtttatgacttcttcttcgaaaggagtgcacctatc
accgtccacatctccgtcagaacagcagatacaaatgccccccgagtgtcctggaacaca
ggtctgagtcttctagaggggcagtctcgggccatcacttgggaacagtttcagattgtc
gacaatgatgacatccacgctgtccagctggtcaccgtgggcggcctgcagcatggacgg
cttacactaagaggtgggaaaggatttctcttcactgtggctgaccttcaggctggagtt
gttcgctatcatcatgacgacagtgactccaccaaagactttgtgatcttcaggatattc
gatggccatcatagcatccgccataagtttcccatcaacatcttgcccaaagatgacagt
cccccattcctcataagcaacattgtgattgaactggaggaggggcagaccatactgatc
cagggttccatgctgagagcatcagacatggactccagtgatgactacatcttctttaat
atcacgaaacctcctcaggctggagagatcatgaagaagccagggccagggttgataggc
tatcctgtctctggcttccttcagagggatctatttaatggcatcatttactatcgtcac
tttggtggagagatctttgaagacttttttgaatttgtcctgtgggacagccatgaacct
ccaaatctctcagtgccacaggtggtgaccatccatatcactccagtggatgaccaggtt
ccaaaagaggctcctggagtttctcggcatttggttgtcaaggaaacggaggtggcctac
ataactaagaaacatctacattatatagatacagaatatgacagggagcttctctacatg
ataacgacacctccgtttttctctttcggccacagacatctggatgctgggaaattgttt
acggtcgacagcattccaaagctgaccaaaaatcctgcagcgccggggctgagatcattc
actcagcatgctgtgaaccacatgaaagtggcctacatgccacccctgcaagatataggc
ctccatccgcaacatgtccagtttgccttttccatcagtaaccaacatggtggcactttg
cacgggatctgctttaacattacaattcttccagtggacaatcaagttcctgaggtgttt
accaatcccctgagagtgactgagggaggtcaatgtgtcatcagcacagagaatgtcctg
gtttctgatgtggataccaaactggacaacatctgcctctccctacaaagactgcctcag
tgtggaagggtggagctggatggatttcctctaaacacaggaggcacattttcttgggga
gacctccgtgccttaaaagttaggtatcagcatgatggatctgagagacttcaggatgac
atattcttggaggtcacagatggcacgaattcagcagaatttgttctacatgttgaggta
ttccctgtaaatgatgagccaccaatcctaaaggctgacctcatccccatgatgcattgc
tcagagggcgaagaggtggtcatcacctctgaatacattttggctactgatgtggacagt
gatgacttgaagctgatgtttgtgattgctcgagagcctcagcatggtgtggtgaggaaa
gctggagtcacagtggatcagttctctcagggagatgtcatctcaggggctgtgacatac
aaacacacgggtggtgagattggcctggtgccttgttttgatgccattacattggtggtt
tcggatggagaagctggcccgtctgtgaatggctgttgctacaatgggcctcatccatct
gttcctcttcatgagtcctttccagtgtatgacctcaatatcacggtacatccagtggac
aaccaatcaccttcaattgcaataggtaccatgttcgtggtagatgagggtttctctgca
gccgttaccattaaccatttgtctgccactgaccctgacactgcagcagacgacttggaa
tttgttttggtttctcctccccagtttggctaccttgagaacacgcttccttctgcaggt
tttgaaaaaagcaatatgggcataagcatagcttcgttccggtggaaagacatgaaggct
ttgcatattaactatgtgcaggccaagcatctgaggatggaaccaacagctgaccagttc
atggtgtatgtcacagatgggaagcgacgctccttggagataccattttacgttatcatc
aaccccacgaatgatgaagctcctgactttgtagtgcagaatattactgtatgtgagggt
cagatgaaagaactggattcctccatcatcagtgctgctgatctagatgttcccaaggac
gctttgctgttcagcatcactcataaaccacgccatggcctcctcatcaatggggtgctt
agcaaagactttcctcaaaataagcagcctgtgaaccctggccagaagcatgaacttgtt
cagaacttttccttggaacttctcaagaatggactgaagttgatgtatgtgcatgatgac
tcagagagccttgctgatgactttacagtccagttgtcagatgggaaacataagatatta
agaacgatttctgtggagatcaccccagttaatgatgagaaaccaatgctgagcaagaag
gctgaaattacagtgaaaatgggtgaaactcgtattatttctagtgccattctttcagcc
atagatgaagactcacccagggagaagattgactatttgtttgaaaggcttccccaaaat
gggcagcttcaacttaagatagggaggaactgggtccctctctaccctggcatgaaatgc
actcaggaggaagtggatctgaacttgctcagatacacacacaccggggcgatggattcc
caggaccgagacagcttcaccttctacctctgggatggtgacaacagatcaccagcattt
gactgtcacatcaccatcaaggatatgggaaaaggtgatattgtcatccttgtgaaaccg
ctggtggtgtctaaaggtgaccgaggtttcttgacgaccaccactctccttgctgtggat
ggaacagacaaacccgaggaactgctctatgtcatcacctcccctccgcggtatggccag
gttgagtatgtccgctatcctggagtccccattacaagcttcagccaaatggacatagca
ggacagacagtctgctatgtacataagagcaaggcagctgtctcccgtgacaccttcaga
ttcctcgtcagcaatggcctgcagaccaaacacggggtgtttgagatcaccctggagacc
gtggacagagccttacctgtggtgaccaggaacagggggctgaggctggccgaaggcgcc
acaggcctgctttcccctgacctcctccagctgaccgaccctgacaccccagcggagaaa
ctcaccttcgtgttggcccagctcccacaacaaggccagctttacgtgcgggggacagag
ctacttcaacacaacttcactcagcaggatgtggacagcagggatgtggcctaccggcac
ctgggaggggactcccggattgactgctttacctttgtggccacagataggacaaaccaa
ggctttgttgtggatgggagagtgggccaagagcctgtgtcattcaccatccaggttgac
cagttggacaaaacagccccctacatcacacacttgcattccccttctcaagtggggctc
ctaaaaaatggctgttacgggatttacctcacttcccacgtgttgaaggcatcagaccct
gacaccgatgacgatctgatcatctttaagattttacgaggcccccaacatggacatctg
gagaacacaacaggtgaatttatccatgagaaatttatccaaaaggacttaaacagtaag
accattctttacatcataaacccatctttggaagtgaattcagatatcatggaatttcaa
atcatggaccccacagggaactctgcgactcctcaaattttggaactgaagtggtctcat
attgaatggtcacagactgaatatgaggtctgcgagaatgtgggcatgttgcccttggaa
attaccagaagaggatattccatggactcagccttcgtgagtgtaaaggtcaaccaagtg
tcagctacagttggaaaagacttcactctgactccatctacactgattcagtttgaccca
ggaatgtcaactaagatgtggaatatagcaattacctatgacggtttagaggaagacaat
gaggcctttgaagtaattctgaactcccctgtgaatgcggttcttggcacaaagacaaaa
gctgcagtgaaaattttggactcaaaaggagggcagtgccatccttcacattccttcaac
cccaaccagcacaacgcacaggagaagggcatttggtacccactgtccccagggtcttcc
tcacccaccacttctggttcctttcatctggaaagaagaccccttccatctaacaagcag
ccggcagtcactaggggagacaaccaacagggctttgagtctccagatgtttctcgtatg
aagcttaggacccgggggaatggcaaaatggttcttccatcctctgttcatagaaatgga
accgacatcatctataatctggaggaagacggctctccatctcacaaacggaaggccaaa
gtatccattattcgtcagccacaaaagacaagcaaagaggcagagctgcctcaggcagat
aaggacccgctgccctcatttccaaagaactgcacactggaattaaagggccttttccac
ttccaagaaagcctccgaaagctatacaagtgtgatggggttacgtggaaagcttggagc
ccccaaagcgaggaggtggaaggtaaatcctgcccagctggttggcaccatcactcaggc
tactgccactccctgatcacagagcagaaagtcacctggaacacagctgcccgagcttgc
aaggaacatcacctgggcagccttgtgacagttctctctagacggcacatgcgatggctc
tgggacatcagtggagggaaacccttctggataggtttgaatgaccaagtgcgtgctggc
cactgggagtggatcggcggggaacctgtcaccttcaccaactggaggaaagggccccct
caacgtttaaagcgtggcaagaactgcgttttggctcagagacaagggaagtggcaaaca
caggactgtaggaagggcaaggctcacaattacgtgtgctccaggaaactctaa
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integrated database retrieval system
