Zalophus californianus (California sea lion): 113935044
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Entry
113935044 CDS
T07874
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
113935044 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113935044 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
zca03310
]
113935044 (RORB)
Transcription factors [BR:
zca03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113935044 (RORB)
Nuclear receptors [BR:
zca03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
113935044 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
113935044
NCBI-ProteinID:
XP_027472574
UniProt:
A0A6J2EUH3
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All DBs
Position
13:complement(78864112..79062779)
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AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYGGSISNGLSSLNSEAGGTYANGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataaatcctccgggatc
cactatggagtgatcacgtgtgaaggctgcaagggcttcttcaggaggagccagcaaaac
aatgcctcttattcctgcccaaggcagagaaactgtttaatcgacagaacgaacagaaac
cgttgccaacactgccgactgcaaaagtgtcttgccctaggaatgtcgagagatgctgtg
aagttcggcaggatgtccaagaagcagagggacagcctgtatgctgaggtgcagaagcac
cagcaacggctgcaggagcagcggcagcagcagagcggggaggccgaagcactggccagg
gtgtacggcggcagcatcagcaacggcctcagcagcctgaacagcgaggccgggggcact
tacgcgaacggacacgtcatcgacctgcccaaatccgaggggtattacagcgtggattct
ggccagccgtccccggatcagtcaggacttgacatgactggaatcaaacagataaagcaa
gaacccatctatgacctcacgtccgtacccaacttgtttacctatagctctttcaacaac
gggcagctagcgccggggataacgatgactgaaatcgatcgaattgcacagaacatcatt
aagtcccatctggagacatgtcagtacaccatggaggagctacaccagctggcgtggcag
acccacacctatgaagaaattaaagcgtatcaaagcaagtccagggaagcgctgtggcag
caatgcgccatccagatcacgcacgctatccagtatgtggtagagttcgccaagcggata
acgggcttcatggagctctgtcagaatgatcaaattctccttctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgtcctgttt
gaaggaaaatatggaggaatgcagatgttcaaggccttaggttctgatgacctggtgaat
gaagcatttgactttgcaaagaatttatgttccttgcagctgactgaagaagagattgct
ttattctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcaaagttaatagccaagatccccaccatcacggcggtctgc
aacttgcacggggagaagctgcaggtattcaaacaatcccatccagacatagtgaataca
ctctttcctccattatacaaggagctctttaatcctgactgtgccaccgtctgcaaatga
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