Zalophus californianus (California sea lion): 113935147
Help
Entry
113935147 CDS
T07874
Symbol
VPS13A
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113935147 (VPS13A)
Membrane trafficking [BR:
zca04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113935147 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Mer2
Motif
Other DBs
NCBI-GeneID:
113935147
NCBI-ProteinID:
XP_035579374
UniProt:
A0A6P9F0Q5
LinkDB
All DBs
Position
13:complement(76440913..76711066)
Genome browser
AA seq
3181 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLIIPWKNLYTQPVEAVLGDIYLLIVPSSKIKYDPLKEEKQLLEAKQHELKRIEE
AKQKVADQEKLRVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQNWVPCLHDETEKLFCKLIRLDNLFAYWNVKSQLFYLNDYDESLDSLKKGIV
NGNIVPKGYDFVFRPISANAKLQMNRRSDFDFSAPKINLDVELHDIAIELNKPQYFSVME
LLESVDMMTQNLPYRKFKPDVPLHYHARDWWAYAIHSVLEVNVCPRLRMWSWKHIREHRQ
KMKQYKELYKKKITTKKPTGEILMSLEELEKTLDVFNITISRQQAEVEVKKAGYRIFREG
AKDSEENKGWFSWLWTWSEPRSKEQPDVKPGILEEMLTSEEKTLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIVLREKQETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPRLLSSLDDATSLFQIIFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLAQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLKINLKASYVIIPQG
GIFSPTSNLLLLDLGHLKVTSKSRSELPDMKPGGARLEEIMHRAYDSFDVQLTSIQLLYS
TVGDDWREARKLNVSTQHILVPMHFNVELSKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPATETYAPAKPFQIQRSTSLGTSQISQKMLPFLELPCVDDDSEEE
FFDAPCSPLDEPLQSPTEIQSYQKKFQKLDCSKNMIQYKIRFEVPEVLIQFYHLVGDSEL
PVVEVDVLGLGTDVELRTFDLKANAFLKEFCLKCPEHFDANKKPIYLITTLDNTMEDLLT
LEYVKAEKNLPNLKSTYNNAVQLIKVNFSSLDIHLHTEALLNTINYFNNIIPQLEEKPAP
VSVAETEDKGEVVKKMPLKLSKNEDIITLQILAELSCLQIFIQDQKRNIAEIKIEGLDSE
IIMRPAATEINAKLRNIIVLDSDKTAVYKKAVYITGKEVFSFKMISFVDATAGSAYTDMN
VVDVQINLTVGCIEVVFITKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQR
SSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHVITESQSNPPPVIDLITIR
LSEMRLYRTQFIDDAYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPMEFIL
SQEDITTIFKTLYSNIWYEEGGGASPAGLKDRNSVNSGATNASHHLEGTTVVTAAVVEIY
SQASQVKTTLNMSFRTDYLTMVLYSPGPEQTSFTDVRDPSLKLAEFKLENIISTAKMYTD
DSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRRVRDGWVTDLVLQE
TYICASVEFLLTVANVFLEAYTTGTAVETSVQTWTAKEEALHYLLYISFVVYLYRKSEKW
EINIIIKNXEIVFVADMTRSDAPALVITTQCEICWKGDLENNTMTAAIKDLQVRACPFLP
VKRKGKITTVLQPCDLFYQATQIGTDPQVIDISIKSLTLKVSPVIINTVITITSALYTSK
DTIPQETTSSTVHLWEKKDTKNLKMWFLEEPNEVENKAPTTELILKGEMIRVNIDSIFIV
LEAGIGHRTVPMLLAKSRFSGEGKNWSSLINLYCQLDLEVHYYNEMFGVWEPLLEPLEID
QTEDFRPWNLGIKMKKKAKKAIVESDTEEENYKVPEYKTVISFHSKDQLNITLSKCGLVM
LNNLVKAFTEAATGASTVFIRDLAPFMILNSLGLTVSVSPSDSFSVLNVPLAKSYILKNE
ESLSMDYVGTKDNDHFSAMTSLSSKLFFILLTPASHSTADKIPLTKVGRRLYTVRHRASG
VERSIVCQVDGVEGSKKITIRSPVQIKNHFSIPLCVMXGNTLLGTASPGSEFNIPLTSYR
HPLSLKPEDEDYQTCERIDFEEIIKNDGTFLKKKCRSKNTAKKPFIIHVVPXKDNLASLS
VYSEDGWDLPYIMHLWPPILLRNLLPYNIAYYIEGIEHEVYTLNEGHPPHICTVHWKKAR
LHLKLLDYLNHDWKSEYHIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNIGQTVVAFH
SPXWMVNKTSRMLQYKADGIHRKHPLIIKSXVLFSFQPKHFFNNNKVQLMVTDSELSDQF
SIDTVGSHGAVKCKGLQMDYQVGVTIDLSSFNITRIVTFTPFYMIXNKSKYHISVAEQGN
DKWLSLDLEQCIPFWPEDASNALLIQVERNQGPPKKIHFNKQANCILLRLDNELGGIIAE
VNLAEHSTVITFXDYHDGAAPFLLINHTKSDIVQYNQSSLSEIEDSLPPGKAVFYTWADP
VGSRKLKWRCGKSHGEVAQKDDMMTPINSGKKTIYLVSFFEGLQRIILFTEDPRVFKATY
ESEKAELAEQEIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVK
HTEKLEKEFKEYTESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKV
EYSTSAHQSSFRIQVYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRS
AGHSQISRIKYFKVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEIELFHKDIEAFQEEY
KTASLADSSQVSLYEYFHISPIKLHLSVSLSSGKEAKDSEQQEGLMAVRSLNLLLKSIGA
TLTDVQDVVFKLAFFELNYQFHTASELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLI
REFSEGVEAFFYEPYQGAIQGPEEFVEGMALGXKALVGGAVGGLAGAASNITNAMAKGVX
AMTLDEDYTEEKRAMNKQPAGLREGITRGGKXLVSGFVSGITGIVTKPIKGAQKEGAAGF
FKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRL
RDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMXMITKSGVLFVTKGTFGQLTCEWQYSF
DEFTKEPFIVHGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPR
F
NT seq
9546 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcaccctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaacgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttataattccatggaagaacctgtatactcaaccagttgaa
gctgtcctgggagacatttatttactcatagtgccttcttctaaaataaaatatgatcct
ttaaaagaagaaaaacaactcttggaagcaaaacaacatgaacttaaacgaatagaagaa
gcaaaacaaaaagtagctgatcaagaaaaacttcgggtggagaaacaggacacttttaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttatgaggatgatatcacaaatcgagacaacccactgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaaaactgggttccgtgtttacatgatgaaactgag
aaactattttgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagttgttttaccttaatgattatgatgaatcattggacagcttgaagaagggcattgtc
aatggaaatattgttccgaaaggttatgattttgtgtttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcagattttgacttttctgcccccaagataaacctggat
gttgagttacatgacatagcaattgaacttaataaaccacagtatttcagtgttatggag
cttcttgaatcagttgatatgatgacgcaaaacctgccatataggaaattcaaacctgat
gtacctcttcactatcatgccagagactggtgggcttatgctatacacagtgttcttgaa
gtaaatgtctgcccccggttacggatgtggtcatggaagcatattagagaacacaggcaa
aaaatgaagcagtataaagaactgtataaaaaaaagataacaactaagaagccaactggt
gaaattctcatgtctttggaggagttggaaaagaccttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggtaaagaaagctggatataggattttcagagaagga
gcaaaagattcagaggaaaataaaggatggtttagctggctgtggacttggtcagaaccg
agaagtaaagaacaaccagatgttaagcctggaattcttgaagaaatgttgacctcggaa
gaaaaaactttactctatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccatgaagttctttgttcacttgaaaagtatgtctattgttcta
agagaaaaacaagagacaccggagctgttagatattgtagtagaagaatttagcactttg
attgtgcaaagaccaggagcacaagccattaaatttgaaaccaaaattgattcatttcat
gttactggcttaccagataattcaacaaaaccccgcctcctttcttcattggatgatgct
acgtcactcttccaaattatatttgagataaatccattagatgaaactgttgctcaaaga
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacagtgaatagtata
gtggaattcttcagacctccaaaagaggtaaatctagcacagctcacttcagcgactttg
acaaaacttgaagaatttcgtgacaagacagcaacaggtctactgtatattattgaaaca
cagaaagttctcgatctcaaaattaatttgaaggcttcgtatgttattatcccacaaggt
ggaatttttagccctacatcaaatctactacttttggatcttggtcatctaaaggtgaca
agtaaaagtcgttcagaattgccagatatgaaaccaggtggggccagacttgaagagatc
atgcatagagcttatgattcctttgatgttcagcttacaagcatacagctgctttacagc
acagttggcgatgattggagagaagcacgaaaactcaatgtatctacacagcatattttg
gtacctatgcacttcaatgtggagctctctaaggccatggttttcatggatataaggatg
cccaaattcaagatttttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaaggaattttggaattgattgaaagcattccgaaacccacacctgcaactgaaaca
tatgcccctgccaaaccatttcagattcaaaggtccacttctttgggaacatcacagatt
tcacagaaaatgcttcctttcttggaacttccatgtgttgatgatgattcagaggaagaa
ttttttgatgcaccatgtagtcccttggatgaacctcttcaatctcccactgaaattcaa
agttatcagaaaaaatttcaaaagctggattgttcaaaaaatatgattcagtataaaata
agatttgaagtgccagaggttttgattcagttttatcaccttgttggagattctgaacta
cctgtggtagaagttgatgttttaggattgggcacagatgttgaacttagaacatttgat
ttgaaagcaaatgcctttttgaaagagttctgcctaaaatgcccagaacactttgatgca
aacaagaaaccaatttatttgattacaacactggataatacgatggaagatctgctaaca
ttggaatatgtgaaggctgaaaagaatctacccaacttgaaaagtacttataacaatgct
gtgcaactgattaaggtgaatttttcctctttggatattcatttacatactgaagcactt
ctgaatacaataaattattttaataatataattccacaattggaagaaaaaccagcccca
gtgtctgttgcagagactgaagacaaaggagaggtcgttaaaaaaatgccgttaaaacta
tccaagaatgaagatattattaccttgcagattttagcagaattatcatgtttacagatc
tttattcaagatcagaaacgtaacattgctgaaattaagatcgaagggcttgattctgag
atcattatgaggcctgctgcaactgaaataaatgcaaagctaaggaatataattgttttg
gattctgataagacagctgtatacaaaaaggctgtttacatcactggaaaagaagttttt
agcttcaaaatgatttcttttgtggatgcaactgctggttctgcatacacagatatgaat
gtggttgacgttcaaattaatttaactgttggttgcattgaagtagtttttatcacaaaa
tttctttattctatattggcttttatagataattttcaagcggctaaacaagccttggct
gaggctactgttcaggcagcaggaatggctgctactggtgtaaaagaattggcacagagg
agttctagaatggcattggatgttaacatcaaagccccagtggtggtcatcccacagtct
ccagtttctgaaaatgtttttgttgctgattttggactaattacaatgacaaacacattc
catgtaataacagagagccagagcaaccccccacccgttattgatttgataacaataagg
ttgagtgaaatgcgactatacaggactcaatttattgatgatgcataccaggaagtacta
gatctgctattgccattaaatcttgaggtgattgttgagcgaaatttatcttgggagtgg
taccaggaagttccttgttttaatgtaaatgctcagctaaagcccatggagttcattctt
agtcaagaagatataacaactatttttaaaacattatatagcaatatatggtatgaagaa
ggtggtggtgcctcacctgcaggactaaaagatcggaatagtgttaatagtggagctact
aatgcttcacaccatttagaaggaacaactgtagtgactgctgccgtggtggaaatatat
tcacaggcctctcaagttaagacaacactgaatatgagcttcaggaccgactatctcacc
atggtactgtatagtccaggtcctgaacagacttcctttacagatgttcgtgatccttct
ctgaaacttgctgaatttaagttggagaatatcataagcactgcaaaaatgtatacagat
gactcaacattttcttccttctcattaaaaaactgtattttagatgataaaaggcctcat
gtcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaaggacatg
atggatgtaaagtatagaagagtcagagatggttgggtgactgatttagtccttcaagaa
acatatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttcttgaggcc
tacaccacaggcactgctgtagaaaccagtgttcaaacatggactgctaaggaagaagct
ctccactatcttttatatatttcgttcgttgtgtatctgtacaggaaatcagagaagtgg
gaaattaatattattattaaaaatnctgaaattgtgtttgtggctgatatgacaagaagt
gatgctcctgcattagtcattacaacacaatgtgaaatttgttggaaaggtgaccttgag
aataatacaatgactgctgccattaaagatcttcaagtgagagcatgcccatttcttcca
gtcaagagaaaaggcaaaatcactactgttttgcagccctgtgacttgttctatcaagct
actcaaataggtacagatccacaagtgattgatatatcaataaagtccctcacactaaag
gtttcaccagttatcataaacactgtgattaccataacatcagcactttatacatccaag
gataccatcccacaagaaactacttcttctacagtacatttatgggaaaagaaggataca
aagaatttaaaaatgtggtttcttgaagaaccaaatgaagttgaaaacaaagctcccaca
actgaattgatactcaaaggagagatgataagagtgaacattgattctatttttatagtt
cttgaggctggaattggtcatagaacagtgcctatgctgttggcaaagtcacgtttttca
ggggagggcaaaaactggagttccttgataaatctctactgtcagcttgacctagaagtg
cattattacaatgaaatgtttggtgtatgggagcctttgcttgaacccttagaaattgat
cagactgaggattttagaccatggaatctcggaatcaagatgaaaaagaaagcaaaaaag
gccattgttgagtcagatactgaagaagaaaattacaaagtgccagaatataaaactgtt
atcagtttccattcaaaagaccaactaaacattacattatccaaatgtggccttgtaatg
ttaaataatttagtcaaggcatttacagaagctgccactggagcttcaactgtcttcata
cgggatctagcgccatttatgattttaaattctcttggacttactgtctctgtttcacca
agtgattcttttagtgtacttaacgttccattggcaaaatcatatatattgaaaaatgag
gagagtttaagtatggactatgtgggaactaaagacaatgatcatttcagtgcaatgacc
agcctaagcagtaaactcttcttcattcttctcacacctgctagccactctactgctgat
aaaatccctttaacaaaagtgggacgacgactgtacactgtaagacacagagcgtctggg
gttgaaagatcgattgtttgtcaagttgatggagtggaaggaagtaagaagataacaatt
cgctccccagtgcagattaaaaatcatttttcaatcccactttgtgttatgnnagggaac
actttattgggaacggcttcacctggaagtgaattcaacataccattaacatcttaccgt
caccccctttctctgaagccagaagatgaggactatcaaacatgtgaaagaattgacttt
gaagaaattataaaaaatgatggcacttttctaaagaagaaatgtagatctaaaaacact
gctaagaaaccatttatcattcatgttgtaccgngaaaagataatttggcttctctgtca
gtgtattcagaagatggttgggacttaccatacataatgcatttgtggccacctatcctg
ctccgaaatcttcttccttataacattgcttattatatagaggggattgaacatgaagtt
tatactctaaatgaaggacatccgccccacatttgtactgtgcattggaaaaaagccaga
ctacatttaaaattacttgactatcttaatcatgattggaaaagtgaatatcatataaaa
cctaatcagcaagatattagtttcatcaattttacctgtgttacagaaatagaaaagact
gatttagatattgctatccatgtgacttataatattggccagacagttgtggcatttcat
agtcctntatggatggtcaataaaaccagtcgaatgttacagtataaagcagatggaatt
catcgaaagcatccactaattataaaaagcnnagttctattttcttttcaaccaaagcac
ttttttaataataataaggttcagcttatggtaactgatagtgaattgtcggatcagttt
tcaattgatactgttggtagtcatggagctgttaaatgtaaaggcctgcaaatggactat
caagttggtgtcactatagacctcagcagttttaatattaccagaattgtgacatttact
cctttttatatgatcngaaacaaaagcaaatatcatatatcagtggctgaacagggaaat
gataaatggctctctcttgatttggagcagtgtatccccttttggcctgaggatgcttct
aatgcacttcttattcaagttgaaagaaatcaaggccctcccaaaaagatacattttaac
aagcaagcaaattgtattttattgcgtctggacaatgagcttggaggtattatagcagaa
gttaatttggctgagcattctacagttattacatttncagattatcatgatggagcagct
ccatttctattaataaatcacaccaagagtgacattgttcagtacaatcaaagttctctc
agtgaaatagaagattccctccctcctggaaaagcagtattttatacatgggctgatcca
gtgggctctagaaagctgaagtggagatgtggaaaaagccatggtgaagtagcacaaaag
gatgatatgatgacacctataaattcggggaaaaagaccatttatttagtttcgttcttt
gaaggcttacaacgcattattttattcactgaagatccaagggtatttaaagcaacatat
gaaagtgagaaagcagagttagcagagcaagaaattgtgttggccttacaagatgttgga
atttctctcgtcaacaattacacaaagcaagaagtagcctatattggcattacaagttct
gatgtggtttgggagacaaagcccaagaagaaggcaagatggaagccaatgagtgtaaag
cacactgagaagttagagaaagaatttaaggaatatactgaatcttcaccttcagaagat
aaggttattgaattggacactaacattccggttcgcttcacacctagtggtactaacatg
aaaattctgcagccacatgtaatagctataagaagaaattatcttccagcattgaaagta
gaatatagcacatccgcacatcagtcatcatttagaattcaagtttacagaatacagatc
caaaaccagatacatggtgctatatttccatttgtgttttatccaattaaacctcccaag
tcggtcaccatggattcagctccaaagccctttacagatgtcagtattgtcatgagatct
gcagggcattcccagatatcacgtattaagtatttcaaggtgttgatccaagaaatggac
ctcaggttagatcttgggtttgtctatgctttagcagaacttatgacagaagctgaagtg
actgaaaaaaccgagatcgaactttttcataaagatatagaagctttccaagaagaatat
aaaacagcttcattagcagattcatcacaagtcagtctctatgaatacttccatatatct
cctatcaagttgcatttaagtgtttccttgagttcgggcaaagaagctaaagattcagaa
caacaggaaggactgatggccgttcgttctttaaatcttttgctgaagagtattggtgcc
acccttacagatgtacaagatgtagtttttaagcttgcattttttgaactgaactatcag
ttccatacagcatctgaactacagtctgaagtaataagacactattcaaaacaggccatt
aagcaaatgtatgtactcattcttggacttgaagttttgggaaatccctttggcttgatt
agagaattttctgaaggtgtggaagcgtttttttatgaaccgtaccagggagccatccag
ggtcctgaagagtttgtggaggggatggcattaggantgaaggcactagttggtggagct
gttggtggattagctggtgctgcctccaacatcaccaatgctatggctaagggggttngc
gccatgactctggatgaagactacacagaagagaagagagccatgaataagcaaccagct
ggtctcagagaaggcatcactcgtggaggaaaangcttagtgtctggttttgtaagtggc
ataacaggaattgttacaaaaccaatcaaaggagctcagaaagaaggagcagctggtttc
tttaaaggcgttgggaagggtttagttggagcagtagcaaggccaacgggaggcatcata
gacatggccagcagtacatttcagggaataaaaagagctacagagacttctgatgaagtg
gagagcctgcgaccccctcgattctttaatgaggatggagttatcagaccttacaggttg
agggatgggactggaaaccagatgttacaggtcatggaaaatgggagatttgcaaaatac
aagtattttacccatgtcatgatcaataaaacagatatgnttatgataactaaaagtggt
gtattgtttgtaacaaaaggaacatttggacagcttacatgtgagtggcagtacagtttt
gatgagtttaccaaagagccattcattgttcacgggaggagattacgcattgaagcaaag
gaacgggtgaagtctgtgtttcatgccaaagagtttggaaaaataattaacttcaagacc
ccagaggatgctaggtggatcctcacaaaactagaagaagcaagagaaccttccccaaga
ttctga
DBGET
integrated database retrieval system
