Zalophus californianus (California sea lion): 113935293
Help
Entry
113935293 CDS
T07874
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zca04515
]
113935293 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
zca04990
]
113935293 (LRFN1)
Cell adhesion molecules [BR:
zca04515
]
Immunoglobulin superfamily
SALM family
113935293 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
zca04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113935293 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_9
LRR_14
Ig_DSCAM-DSCAML_C
CbiM
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
113935293
NCBI-ProteinID:
XP_027472865
UniProt:
A0A6J2F170
LinkDB
All DBs
Position
17:complement(46740135..46752171)
Genome browser
AA seq
770 aa
AA seq
DB search
MAPGPFSSALLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRRVESAAFDAFLATVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGSGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
ESAAERRLVAAELTSNSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDGRRVKGTSRSPPRVSHVCSQTNGAGAPQAPPPPA
QDRYEALREVAPPAAAAVAVEAKGPGAETASAEPETVLGRSLGGSATSLCLLPSEETSGE
ESRAAAGPRRSRSGALGPPASAPPTLALVPGGAPVRPRPQQRYSFDGDYGALFQSHSYPR
RARRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggctcccggccccttctcctcggcgctcctctcgccgccgcctgctgccctgcccttt
ctgctgctgctctgggccggggcgtctcgtggtcagccctgccccggccgctgcatctgc
cagaacgtggcgcccacgctgaccatgctgtgcgccaagaccgggctgctcttcgtgccg
ccggccatcgaccggcgcgtggtggagctgcggctcactgacaacttcatcgcggccgtc
cgccgcagagacttcgccaacatgaccagcctggtgcacctcaccctgtcccgtaacacc
atcggccaggtggccgccggcgccttcgccgacctccgcgccctccgcgccctacacctc
gacagcaaccgcctggccgaggtgcgtggcgaccagctccgcggcttgggcaacctccgc
cacctgatcctcggcaacaaccagatccgccgggtggagtccgccgccttcgatgccttc
ctggccaccgtggaggacctggatctgtcctacaacaacctcgaggccctgccgtgggag
gctgtgggccagatggtgaacctgaacaccctcacgctggaccacaacctcatcgaccac
atcgccgaagggaccttcgtgcagctgcacaaactggttcgcctggacatgacctccaac
cgcctgcacaaactgccccctgatgggctcttcctgaggtcccagggctcggggccgaag
ccgcccacgccgctcacggtcagcttcggcggcaaccccctgcactgtaactgcgagctg
ctctggctgaggcggctgacacgggaggacgacctggagacgtgcgccacccccgagcac
ctcaccgaccgctacttctggtccatccccgaggaggagttcctgtgtgagcccccgctg
atcacgcgccaggcggggggccgggccctggtggtggagggccaggcggtcagcctgcgg
tgccgcgccgtgggggaccccgagcccgtggtgcactgggtggcacccgacgggcggttg
ctggggaactcgagccggacccgggtgcggggggatgggacactggatgtgaccatcacc
accttacgggacagcggcaccttcacctgcatcgcctccaacgccgccggggaagccacg
gcgcccgtggaggtgtgcgtggtgcccctgcctctgatggcgcccccgccagccgccccg
ccgcctctcacggagcccggctcctctgacatcgccacgcccggccgccctggtgccaac
gaatcggccgctgagcgccggctcgtggcggccgagctcacctcgaactcggtgctcatc
cgctggcccgcccagagacctgtgcccggcatccgcatgtaccaggtccagtacaacagc
tccgcggatgactcccttgtctacaggatgatcccatccaccagccagaccttcctggtg
aacgatctggcagcaggccgcgcctacgacctgtgcgtgctggctgtctacgacgacggg
gccacggcactgccggccacgcgagtggtgggctgcgtgcagtttaccaccgctggggat
cccgcgccctgccgcccactgagggcccatttcttgggtggcaccatgatcatcgccatc
gggggcgtcatcgtcgcttcggtcctcgttttcatcgttctgctcatgatccgctacaag
gtctatggcgacggggacggtcgccgcgtcaagggtacctccaggtcgccgccgcgggtc
agccacgtgtgctcgcagaccaacggcgcaggcgcaccgcaggccccgcccccaccggcg
caagaccgttacgaggcgctgcgcgaggtggcgccccccgctgctgcagccgtggcggtg
gaggccaagggccccggggccgagacggcttccgcggagccggagaccgtccttggacgc
tccctgggcggctcggccacctcgctgtgcctgctgccgtctgaggaaacctcgggggag
gagtctcgggccgcggcgggccctcggaggagccgttccggggccctggggccgccagct
tcggcgcctcccacgctagctctggttcctgggggggccccggtccggccgaggccgcag
cagcgctattcgttcgacggggactacggggcgctcttccagagccacagttacccgcgc
cgcgcccggcggacaaagcgccaccggtccacgccgcacctggacggggccggagggggc
gcggccggggaggacggagacctggggctgggctccgccagggcacgcctggcctttacc
agcaccgagtggatgctggagagtaccgtgtga
DBGET
integrated database retrieval system
