Zalophus californianus (California sea lion): 113935347
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Entry
113935347 CDS
T07874
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113935347 (CHD9)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113935347 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
113935347
NCBI-ProteinID:
XP_027473014
UniProt:
A0A6J2EVE2
LinkDB
All DBs
Position
17:complement(30377798..30547607)
Genome browser
AA seq
2902 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKITDYEQLNQFDSMKFHQVNQPFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQQGHSHSMHQNKSFVVHHDFALFQASEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPSQIPNASASQQSLSMQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHISPNSLLQASAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLNSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLQQVESQTEPFTGLDPEDLLQEGLLPQF
DEAAFGQDHSSHVLDHDLERQFTSHLVTRPSDMAPTQMHSQARSWHSSLSNHQHLHDRNR
LYLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPTASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDELSDTEQMPQHTCKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEV
KGSMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRTVKKEVSPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYK
PAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIQPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAK
GIILEDMKVKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQAPGDQRSGGKG
ETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSESDSDSERSSCSSRSSSSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHVKAYD
EESVASLSTTQDETQDSFQMNNGTPESSYILQGGYMLAASYWPKDRVMINRLDSICQTVL
KGKWPSARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPPGAGVKEEHDQSTQMSKV
KKHVREKEFTVKIKDEGGLKLTFQKQGHAQKRPFEGEDGALGQQQYLARLRDLQSASETS
LASFPKSMPVSGTSIQSTLGANGVRLDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVT
LGLTTSQISTGINPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEH
PGYVEDLGAFIPRVQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAF
APPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKS
GIAKATATAAAATATSVSGSPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPA
GLSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGLLTKPTESATEEKKGNDSKELEGKKER
TESQNSENGGENSVSSSPSTSSTAALSTAAAASPLALNPLLLSNILYPGMLLTPGLNLHM
PTLSQSNTFDVQKNKNSDLGSSKSQEVKEEDSRVRDQEDKGGTEASPLNENSTDEGSEKA
DASSGSDSTSSSSEDSDSSNED
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacagccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagattcactgaaccatgttcaaggtactcca
acacatcagaagataactgattatgagcagttaaatcagtttgattcaatgaaatttcac
caagtcaatcagccttttggtagcccagctgaacacgtgttatctccacactctcagttt
aattgttctccgatccacccccaaaaccagcccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctaccagcatttccaatcaaaatggatctcct
tttcaccaacaaggacattctcactctatgcatcaaaataaaagctttgtggtacaccat
gactttgccttatttcaggccagtgaacaacaaacacagtgcacttcactacgctcacaa
caaaacagaaataatcttaacccagggcagaattccctcagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccacccatcacaaatccctaat
gcatctgcgtcgcaacagtctctttcaatgcagcaattttcccaaacgtcaaatccttca
gttcacttcctcaagtgtagcaatcatcaagaagggaatttcaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcatcacattattccttttccagt
aatcacatctcaccaaacagtcttctgcaggcctctgcagtgcttgcacctaatcataca
aatcagactttatctgattttaccggaagtaactccttttcacctcataggggaatcaag
caggaatccactcagcatatgctaaatcccaatacatcgttgaattcaaataatttccaa
atgttgcattcatcacatcctcagggtaattatagcaattcaaaattatctcctgtacac
atgaacttcccagatcctgttgactcaggaactcaaatgggccatttcaatgatcacgta
gaaactaatggcttttcatctttagaagagaatttacttcaacaagtggagtctcaaact
gagccattcacaggacttgacccagaagacctcctccaggagggtctccttccccaattt
gatgaggcagcatttggacaagatcattcaagtcatgttttagatcatgaccttgaacgg
cagtttacttcacatcttgtaactcggccttcggatatggctccaacacagatgcatagt
caggctcgaagctggcactcttcactttccaatcatcagcatttacatgacagaaatcgc
ctatatttacagcgacagcctccatcttccaagaagagtgatggttctgggacatatact
aagttgcagaatacccaggtgaggatcatgtctgagaagaagcagagaaaaaaagtggaa
tcagaaagcaagcaagaaaaggctaatcggataatatcagaggccatagcaaaagcaaag
gaacgtggggaacgcaatattccacgagtaatgagtcctgaaaactttcctactgcttca
gttgaaggaaaagaggaaaagaaaggtagacggatgaaatccaagccaaaggacaaagag
agcaaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcatt
attacattgggtaagaaacaaaaaagaaagaatgagtcttcagatgagctatctgataca
gagcagatgccacaacatacatgcaaagaggaggactctcaaaaaagaagatcaaatcgt
caaattaaaagaaaaaaatatgcagaagatgcagaagggaaacaatctgaagaagaggtt
aaaggttctatgaaaataaaaaagaattcagctcctttacctggtgaacaacctttacaa
ttatttgtggagaatccaagtgaagaagatgctgcaattgtagacaaaatactatcttct
agaactgtaaaaaaggaagtatcgcctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagaacagcagcttttgaaa
gataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacat
ttttttgcagatatggaagaggaaccatttaacccagactacgttgaagtagacagagtg
ttagaagtctctttttgtgaagataaagatactggtgagcctgttatttactacttagta
aagtggtgctcattaccatatgaagatagtacatgggaactgaaagaagacgtagatctt
gcaaaaatagaagagtttgaacagttacaagcttcaaggcctgacacaagacatttggat
cgtcctcccgctaatatttggaaaaaaattgatcaatccagggactataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttattcaattggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctacgaaatccttctgactggtataagaggacctttcctgattattgctccactttct
actattgcaaactgggagagagaatttcgtacatggactgatattaatgttgtggtttat
catgggagcctgattagcagacagatgatacagcaatatgagatgtacttcagggactca
caggggcgtatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attcttggtggctgtggagagcttaatgcaattgaatggcgatgtgtgattattgatgaa
gcacataggttaaaaaataaaaattgtaaacttctagaaggtctgaaactcatgaatctg
gaacacaaggtgcttctgactggcacacctctccaaaatacagtagaagaactattcagt
cttcttcactttctggaacctttaaggtttccttctgaatcaacatttatgcaagaattt
ggggatctgaaaacagaggaacaggtgcaaaaacttcaggcaattctgaagccgatgatg
ttgagacgattgaaagaagatgtggaaaagaagctggcaccgaaggaagaaaccatcatt
gaagtggaacttactaacattcagaagaaatactaccgggctattttggagaaaaacttc
tcatttttatccaaaggagcagggcagactaatgtccctaacttggtcaataccatgatg
gagctcaggaagtgctgtaatcatccatatcttatcaaaggtgctgaggagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaattggtccttattgataaattgcttcccaaaatgaaagctggaggt
cataaagtgctcatcttctctcagatggtacgctgccttgatatcctggaggactatctc
attcataaaagatatttatatgagcgaatcgatggaagagtcagagggaatcttcggcaa
gctgccatagatcgatttagtaaacctgattcagatcgatttgttttccttctgtgtacc
cgagctggtgggttgggcatcaacctaactgctgctgatacatgtataatttttgattct
gattggaatcctcagaatgacctgcaggcccaagctcgttgccacagaattggtcaaaat
aaagcagttaaagtctaccgactagtaactcgtaactcatatgagagagagatgtttgac
cgagccagtctgaagctgggtctcgataaggctgtgttacagagcatgagcggaagagaa
agtaatgttggtggtattcaacagctttccaaaaaagaaatagaagatctgcttcgaaga
ggtgcttatggtgccattatggaggaagaagatgaaggctctaaattctgtgaggaggat
atagatcaaattttactgcgtcggacaaaaactattacaattgagtcagaaggacgtggg
tcaacgtttgccaaggcaagttttgtggcatctgggaatcggacagatatttccttagat
gatcccaacttctggcaaaaatgggctaaaaaggcagaaatagatatagatgccatcagt
ggcagaaacagcttggttattgacactccaagaattaggaagcaaacaagaccttttagt
gccacaaaagatgaattggctgaattatctgaagccgaaagtgaaggagatgaaaaaccc
aaactgcggagaccctgtgaccgttccaatggctatggaagaactgaatgctttagagta
gagaaaaatcttctagtttatggatggggccgatggagagagattctgtctcacggccgt
tttaagagacagctgaacgagcatgatgtagaaataatttgccgagccctcttagcatat
tgcctggttcactaccgaggagatgagaaaatcaaaggcttcatatgggatctcattact
ccaactgaagatgggcagacacgagaactacagaatcatctaggcctatcagcccctgta
cccaggggtcggaaagggaagaaagtaaagactcaaacaagctcatttgatatacagaaa
gcagaatggcttcgaaaatataatcctgagcagctacttcaagatgaaggatacaaaaaa
catataaaacaccactgtaataaggttttgcttcgtgtaagaatgctatattatctaaag
caagaagtcattggaaacgagtgtcagaaagtatttgatggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgaatggtgggattttgat
gctgataagtcacttcttattggagtttttaaacatggttatgaaaaatataacactatc
cgagcagacccagcattatgcttcttggaaagagtgggaaaacctgatgagaaagcagtc
gctgcagaacagagggcaaatgattatatggatggggatgtggaagatccagaatacaaa
cctgccccagctatctttaaagatgatatagaggatgatgtttcttcaccaggagatctt
gttatagcagacggagatggtcaactgatggaaggtgataaaatttattggccaactcag
tcagctttaactacacgtttgaggcgtctcatcactgcatatcagcgtactaataaaaac
agacaaatccagcagatacagcctactttctcagtgcctgccagtgtaatgcagcctctt
tacgaagaagccactctcaatcctaaaatggcagccaagatagaaagacagcagagatgg
acaagaagagaagaagctgacttttatagagtggtgtctacatttggagtggtatttgac
cctgatagaggccaatttgattggacaaaatttagagctatggctaggctgcataagaaa
actgatgatagcttggagaagtatttgtatgcattcatgtctatgtgtcggagggtttgt
cgtcttccttccaaagaagaattggtggatccaaatatttttatccagccaatcacagaa
gagcgtgcttctaggactttgtaccgtattgaacttctaaggaaagtacgggaacaggcc
ctccggcacccacaattgtttgagcgcttgaagctttgccatccaaatccagacttacca
gtctggtgggaatgtggccctcatgatagggacttgctcatcggagccgctaaacatggg
gtgagccgaacagactatcacattcttcgtgatcctgaactctcctttatggcagctcag
aggaactacagtcaaagtaagatggctcattcgaggacttctaccccacttttacagcaa
tatcaagtagcactttctgcttctccacttacctctctgcctaggctcctagatgctaaa
ggtattattctagaggatatgaaagttaaaagtgaaaatcttaaagaggagcctcagtct
tctgaagaagaatctatgtcttctgaggaaaccaggacactaataaagtctgagcctgta
agtccaaagaacggtgttttaccacaggcccctggagaccagagatctggtggaaaaggt
gaaacagacagacgcatggttgcagccagaacagaacccctaactccgaacccagcttct
aagaaacagcgagtccacaaaagaggatccgaatctagttctgagtctgactctgattcg
gagagatcatcctgttcttccagatcatcttcttcctcgtcttcctcctcctcttgttcc
cactctcgatcgggctctagctcttcttcatcctcctcttgttcctcagcttcgtcttca
tcctcatcctcatcctcttcctcgtcatcatcctcttcatcttcatcagaagagagtgac
agtgaagaagaagaagtccagaagcgagcagaaggtacccctcacgtgaaagcctatgat
gaagaaagtgtcgcatcactgagcactacccaggatgagacccaggatagtttccagatg
aacaacgggacgccagagtcctcttacatcttacaaggtggatacatgctagcagcttca
tattggccaaaggaccgcgtgatgatcaaccggctggacagtatttgtcaaacagtgctg
aaagggaagtggccttcagctagaagaagttatgatgccaacacagtggcttctttctat
accacaaaactgctggacagccctggtgcagctacagaatatagtgaacccagtgtaccc
actcccccaggtgccggtgttaaagaagaacacgatcagtcaacacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaag
ttgacatttcagaagcaagggcatgctcagaaaagaccgttcgagggtgaagacggtgcc
ctggggcagcagcagtacctggctcggctccgggatctgcagagcgcatcagagaccagc
ctcgccagtttccccaaatccatgcccgtgtcaggtacttccattcagtcaacccttggt
gccaatggagttagattagacaaccagcctgtagtcaaaaaaaggcggggaaggaggaag
aatgtagaaggtgttgacatcctcttttttaacagaaataaaccacctaaccatgttact
ttaggtttaaccacctcacagatttctacagggataaatccagcactgtcctatactcaa
cctcaaggaattcctgatacagaaagtccagttccggttattaacctcaaagatgggaca
agacttgcaggcgatgacgcgccaaagagaaaggatttggaaaaatggcttaaggagcac
ccaggttatgtggaagatttaggagcttttattcctagagtgcagctccatgaagggagg
cccaaacaaaaaaggcatcgctgcagaaaccctaataaactcgatgttaatagtcttact
ggagaagaacgtgttcagctaattaacagaagaaatgccaggaaggttggaggtgcattt
gctcctcctttgaaagatttatgtagattcctgaaagaaaattcagaatatggagtagct
cctgaatggggagatgttgttaagcagtctggatttcttccagagagtatgtatgagcgt
attctcactggtcctgttgtgagagaggaagtcagcaggcgggggcgacggcctaaaagt
ggaattgccaaggccacggcaacggcggcggcggcaactgccaccagcgtgtcaggcagt
cctttgttagccaacgggttacttccaggtgtggatctcacgacccttcaggccttacaa
caaaatctacaaaacttgcagtccctgcaagtaaccgcagggctgatgggaatgcctgcc
ggcctttcttctggaggagaagctaaaaacgtggccgccatgttccccatgctgctgtca
ggaatgactggcctaccaaatctgctgggcatgggaggactcctgacaaagcctaccgaa
tctgcaaccgaagagaaaaagggaaatgactcgaaggagctagaaggaaaaaaagaaagg
acagagagtcaaaattcagagaacgggggagaaaactccgtgtcgagttctccttccacg
tcctctactgctgcattaagtacagcggcagctgccagcccattagctcttaacccacta
ctgctctctaatatactctatccagggatgctgctcactccaggccttaatctccatatg
ccaactttgtcccagtccaatactttcgacgtacagaaaaacaaaaacagtgacttaggc
tcgtctaagtcccaggaagtaaaggaggaagattccagagttagagatcaggaagacaaa
gggggaactgaagcaagtcctctcaatgagaacagcacagatgagggttcagagaaagcc
gatgcttcgtctggatctgacagtacgtcgtcgtcgtctgaggattcagattctagtaac
gaagactga
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integrated database retrieval system
