Zalophus californianus (California sea lion): 113935363
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Entry
113935363 CDS
T07874
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
113935363 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
113935363
NCBI-ProteinID:
XP_027473065
UniProt:
A0A6J2EXS4
LinkDB
All DBs
Position
17:complement(53936069..53982209)
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AA seq
2174 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSESDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSSGAPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPRSLMDGIGPGSDYII
KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMG
DFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPP
PAISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQ
TISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSI
GAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRG
GPFNPSSGGPLPSSSPASFDGPSPPDTRVGGREKSLYHSGALPPAHHHPPHHHHHHAPPP
QPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSGG
GGIGSSQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPS
PTSPASPQPPPAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEAAGGGGG
GGGSSAPSPAPAMSPVPPSPSPVPTPTSPSGPATLDFTSQFGAALVGAARREGGWQNEAR
RRSTLFLSTDAGDEDGGDSGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGAGSGGG
YGAYAAGSRAYGGSGSSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSE
GGGPPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQ
EKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPPPHPGVSKAWRSGAPEEPERLP
LHVRFLENCQPRASGAGGRGPPSEDGPGVPPPSPRRSLPPSPTSPRGSEENGLPLLVLPP
PAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLPPVPPPA
IAAAPPTLDSTASSLTSYDSEVATLTQGAPVAPGDPPPPGPPAPAAPAPPAPQPGPDPPP
GTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGGGGGGASVASGPELLD
TYVAYLDGQAFGGSGTPGSPYPPQLMTPSKLRGRALGTSGGLRPGPSGGLRDPVTPTSPT
VSVTGAGTDGLLALSGCTGPSTAAMAGGPVAIEPEGPPVPLPSASSLPRKLLPWEEGPGP
PPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHH
GGASYVPERTASLQRQRLSEDSQPSLLSKPVSSLFQNWPKPPLPPLPTGSGVPPSAAAAP
GATSPSASSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGP
LYPGLFDIRSSPTGGAGGSADPFAPVFVPPHPGMSGGLGGALSGASRSLSPTRLLSLPPD
KPFGAKPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGH
RMNIDRALKFFLER
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggagcacctggtagtctggcctccacccgaggcctccagggccgc
tccatgtctgtcccggacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgtctgcgcttcaaccctgatgccaccatctggacagccaag
cagcaggtgctctgcgccctgagcgagagcctgcaggatgtgctcaactacggtctgttc
cagccggccacctcaggccgcgatgccaactttctggaggaggaacggctacttcgggag
tacccccagtcttttgagaagggggtgccctacctggagttccgatacaagacccgggtt
tacaaacagaccaacctggatgagaagcagctggccaaattgcacacgaagacggggttg
aagaagttcctggagtacgtgcagctcgggacgtccgacaaggtggcgcggctgctggac
aaggggctggaccccaattatcatgactcggattcaggagagacccccctgactctggct
gcccagacggaaggctctgtagaggtgattcgaaccctgtgcctgggaggggcccacatc
gacttccgggcccgggatggcatgacagcgctgcacaaagctgcgtgtgcccgtcactgc
ctcgctctcacggcactcctggaccttgggggctcccccaactacaaggaccgccgaggc
ctgacccctctgttccatacggcgatggtggggggcgacccccgctgctgtgagctcctc
ctgtacaacagggcccagctgggcatagctgatgagaatggctggcaggagattcaccag
gcctgccagcggggtcactctcagcacctggaacacctgctcttctacggggctgagccc
ggagcccagaacgcctcggggaacacggccttgcacatctgcgccctctacaataaggag
acctgcgctcggatcctcctctatcgaggagccaacaaggatgtgaagaataacaatgga
cagacccccttccaggtggcagtgatcgctgggaattttgaactgggggaactgatccga
aaccaccgagaacaggatgtggtgcccttccaggagtcccccaagtacgcagcccggcga
cggggacccccaggcgcagggctgacggtgcccccggcgctgcttcgggccaacagtgat
accagcatggccctgcccgactggatggtgtttgccgccccggggacctcatcctctggg
gctcccggccctacctcagggccccagggccagtcgcagccctcggcccccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggcgcccgggcccgctcccca
tcccgcgggaggcaccctgaagaggccaagaggcagccccgtggacggcccagctccagc
gggacgcccagggaagggccggcagggggcacagggggctcggggggccctgggggctcc
ctgggcagccgcgggaggcgcaggaagctctactcagcagtacccggacgctccttcatg
gccgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggggagaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcgtt
ggctggttcccctctgactgcctagaagaggtggcgaaccgctcccaggagggaaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagaagcttgatggatgggattggcccagggagcgattacatcatt
aaggagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccgg
ggggccaaggcgcagacccccatcgaggagttcacccccactccggccttcccggcactg
cagtatctggagtctgtggacgagggtggcgtggcatggcgagctggacttcggatggga
gacttcctcatcgaggtgaacgggcagaatgtggtgaaggttggccaccggcaggtggtg
aacatgatccgccaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcac
ccggacatggatgaggctgtccataagaaagcaccccagcaggctaagcggctcccgccc
ccagccatctctctgcgttccaagtctatgacctcagagctggaggagatggtctccccc
tggaagaagaagagtgagtacgagcagcagcctgcgccggtgcccagcatggagaaaaag
cggaccgtgtatcagatggctctcaacaaactggatgaaattttggcggcagctcagcag
accatcagtgcaagcgagagtcctggacctggtggccttgcgtcgctgggcaaacaccgg
cccaaaggcttctttgccactgagtcaagcttcgatccgcaccaccgctcgcagccaagt
tatgaacgtccttcttacctgcctccaggacctgggcttatgctccggcaaaaatctatt
ggggctgcagaagatgatagaccctacctagcacccccagccatgaagttcagccgcagc
ctgtctgtgcctggctcggaggacatccccccgccgcccaccacgtccccaccggagccg
ccctacagcacacctccagccccctcctcctctggccgcctcaccccatcccccagagga
gggcccttcaaccccagttcgggtggccccctcccctcctcttcccccgcatcctttgat
ggaccctcccctcccgacacgcgtgtagggggccgtgagaagagcctgtaccacagcggg
gccctgccccccgcccaccaccacccgccccaccaccaccaccatcacgccccgcccccc
cagcctcatcaccaccacgcccacccccctcatcccccggagatggagaccggcggctcc
cccgacgaccccccaccccgactggctctggggccccagcccagcctgcgcggctggcgg
ggcggcgggcccagccccaccccgggcgccccgtccccgtcgcaccacggcagcgggggc
gggggcatcggctcctcccaggccccggccctgcgctacttccagctgcccccccgggcg
gccagcgcggccatgtacgtgccagcccgctcgggccgcgggcgcaaggggcccctggtc
aagcagaccaaagtcgaaggcgagcctcagaagggcggaggcctcccgcccgccccctcg
cccacgtctccggcgtccccgcagccgccgccggccgccccgtcggagaagaactccatc
cccatccccaccatcatcatcaaggccccgtccaccagtagcagcggccgcagcagccag
ggcagcagcaccgaggcggagccccccacccagcccgaggctgcgggcggcggcggcggc
ggcggcggctcctcggcgccgagccctgccccggccatgtcgccggtgccgccgtcgccc
tcgcccgtgcccacccccacctcgcccagcggcccggccaccctggatttcaccagccag
ttcggagcggccctggtgggggcggcccggagggaagggggctggcagaacgaagcccgc
cggcgatccacgctcttcctctccaccgacgcgggggacgaggatggcggcgacagcggg
ctgggcccaggggcgcccccgggtccccggctgcgccactcgaaatccatcgacgaaggc
atgttctccgccgagccctacctgcggctggagtctgcgggcgcggggagcggcggcggc
tacggggcttacgcggcgggcagccgcgcctacgggggcagcgggagcagcagcgccttc
accagcttcctgccgccccgacccctggtccacccgctgaccggcaaggccctggacccc
gcctccccgctcgggctggccctggccgcccgagagcgggcgctgaaggagtcctcggag
ggtggtgggcccccccagccccctccaaggcccccatcgccccgctatgaggccccgccg
cccaccccacaccaccactcgccccacgcccaccatgagccagtgctgcgtctctggggg
gcctcaccaccggaccccgcccgccgggagctggggtaccgggcagggctgggcagccag
gagaagtcccttccggccagccctccagctgcgcgacgctccttgctgcaccgcttgccc
cccacagctccgggggtcgggcccctcctcctgcagctggggccagagcccccgcccccg
caccccggggtgagcaaggcgtggaggtcgggggcccccgaggagcccgaacggctgccc
ctgcacgtgcggttccttgagaactgccagcccagggccagtggggcggggggaagggga
ccgccctcggaagacgggccgggagttccgccgcccagcccacgccggtccctaccgccc
tcgccgacctccccgcgaggcagtgaagagaacgggcttcccctgctagtcctgccgccc
cctgctccctcggtggatgtggaagacggtgaattcctcttcgtggaaccgctgcccccg
cctctggagttctccaacagcttcgagaagccagagtcgcccctcacacccgggcctccc
cacccgctgccggacccacccaccccaaccacccccttgccccccgtgccaccacctgct
attgctgccgcacctcccaccctggactccacggcatccagcctgacttcctatgacagc
gaggtggccacactgacccagggggcccccgtggctcctggggacccccctccgccaggc
ccaccggccccggcggcccctgctcccccggccccacagcctggcccagacccaccgccg
ggcacagattccgggatcgaggaggtggacagccggagcagcagcgaccaccctctggag
accatcagcagcgcatccaccctgagcagcctctctgccgaaggcggtggcagcgccgga
ggtggtggtggcggcgggggcgggggcgccagtgtggccagtgggccggagcttctggac
acatacgtggcctacctggacggccaggccttcgggggcagcgggactcctggctcaccg
tatcccccgcagctcatgactccttctaagctccggggccgggctctggggaccagtgga
ggcctgaggcccggccctagtgggggactccgggaccctgtcactcccaccagccccacc
gtctcggtgacaggggctgggacggatgggctgctggccctgagcgggtgcacgggaccc
tcaacggcggctatggccgggggtccggtggctatcgagccggaaggcccgccggtgccc
ttgccatcggcctcctctctgcctcggaagctgttgccctgggaggagggcccgggcccc
ccgccaccacccctgcccgggcccctggcccagcctcaggcctcagccttggccacagta
aaagccagcatcatcagtgaactcagctccaagcttcagcaatttgggggctcctcggca
gctggtggcgctctgccctgggcccggggaggcagcgggggaagcggggacagccaccac
gggggagccagctacgtccctgagaggaccgcttccctgcagcggcagagactctctgaa
gactcccagccctcgctcctctccaaacccgtcagcagcctgtttcagaactggcccaaa
ccacctctgccgccactccccacaggaagcggggtccccccttcagccgccgcagctcca
ggggccacctcaccctcagcctcctcctccacgtctacccgccacctccagggtgtggag
ttcgagatgcggccgcctctgctccgccgggcccccagcccctcactgctgcccgcctcg
gagcacaaggtcagccctgcgcccaggccctcgtccctgcccatcctgccttccggaccc
ctgtatccgggcctctttgacatccgcagctccccaactggaggggcaggaggctcagct
gaccctttcgcccctgtctttgtgccaccacaccccgggatgtccggggggcttggtgga
gccttgtcaggggcctcccgctccctctcaccaacccgcctgctttcgctgcccccggac
aagcccttcggcgctaaacctctggggttctggaccaagttcgacgtggctgattggctg
gagtggctgggcttggctgagcaccgagcacagttcctggaccacgagatcgatggctcc
catctgcccgccttgaccaaggaggattacgtcgatctgggtgtgaccagggtgggccac
cgcatgaacatcgaccgggctctcaaatttttcctggagaggtga
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