Zalophus californianus (California sea lion): 113935461
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Entry
113935461 CDS
T07874
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zca04040
]
113935461 (PKD1L2)
04091 Lectins [BR:
zca04091
]
113935461 (PKD1L2)
Ion channels [BR:
zca04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113935461 (PKD1L2)
Lectins [BR:
zca04091
]
C-Type lectins
Others
113935461 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
Lectin_C
SUEL_Lectin
Ion_trans
REJ
Motif
Other DBs
NCBI-GeneID:
113935461
NCBI-ProteinID:
XP_027473213
UniProt:
A0A6J2F660
LinkDB
All DBs
Position
17:7093690..7155395
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AA seq
1530 aa
AA seq
DB search
MSTAGLVLLGLAPRFRATISNPEEGNFCSKNQVAFRDSCYEFAPLGRTFYGAQSWCEEQG
GHLVFIHDEDTQQFLQKHISQDREWWIGLIGNSAXDGTTEGPGSWLDTSNVSYSPWHRGQ
ASPAPNTCGYIGRDASFGWAASDNCTQPFAFICKFGARQSLACDGLNATMHCGSGEVIQI
QDAFYGCQIPHYCTXGAAGPSEEECSWASVKDEVAGQCQGLQVCQVAADGTYFGDLCPTQ
GSYLWVHYQCQEGLQLMVSNESFIFENVTISLTWLLSPFIGNLSCIISTGDGHTFDPYYP
PSSSSNVTHQFRAPGEFTVFAECTTTEWHVMAQKHVTIRDKMERLHVTGCSSLSKSGASP
LCRTVSGDLLWIQVVLDGGTGVTYTALFGNITLAEFTTPRGLLPYNLTLDRAAQQRMGPG
MHHLEIRATSNTTTSAPSRNITVHFMELLSGLQASWGSDHLELGQDLLVNISVAHGIPEG
LTFEVAGLNANFSHQEESLKGPFGIYHVAVPLEGTFLVTVTVRNAFSNLSLEVGSIAVTA
PSSLQEPSGTNAKEKNREKGNVRVYVEPGQYVGPFTTVTLGWPDSDKDLRFQWSCGHCXA
QRSYCVERQLLCTDQRELVLPPSCLPPPNSAITLRLATWRGRELENREEQCLYVSAPLEL
RPRVSCENCRPANASEDVVLRVTMRDNSSVAMFNWYLEDTCLEKAEPLPAACGFQEFWLS
ALILLQSNTSMLRLNSSFLQTWGQAIRIRATAVTGHAYGEDTYVISSLPPPEVPICTITP
EEGTILTRFTIFCNTSSALGPLEYCFCLESEQMRCLMPEVGPSDPQKDNAYKQCXYLQLE
HMEQELQLVGPRGFPQSQSHARALSQVQMLKGCLGGQLGTPPPGYTSFLMASKHPQGLPW
WCVLVGWLLVAATSSVAAFFTMLYGLHYGPGSSLKWLISMAVSFVESVFVTQSLKVRCFA
AFFALVLKRVENEEEPVTSLPGRLSGPGPSALFRAQRCSRKDIYQPPLAIDIEKMKTTHL
KEQKAFAFIREILAYLGFLWMLLLVVYGQRDPSTYHFNRHLEHSFTQGFSAVLSFKEFFM
WANTTLVSNLYSHYPSFITDGNSKLVGSAQIRQVRVLESSCPLAPQLQASLDGCHAPYSL
DIEDLSDYGEGWNASIPNNSSGFSQAWQYQSQSQCRGYPIWGKLTVYRGGGYVVPLGTDR
KSASRILQYLFDNTWLDRLTRAVFVEFIVYNANVNPFCIIILTLETSALGTFFAHMSLQS
LRLYPFTDGWHPFVLAAEAIYLLFLLYYMILQGKLMRKQRWCYFHSKXNLLELTIILASW
SALAMFVKRAILAEREIQCYRNHGEEGISFSETAAADAALGYIIAFLVLLSTVKLWHLLR
LNPKMNMITSALRRAWGDISGFIIIILIMLLAYSIASNLIFGWKLHSYKTLFDAAETMIS
LQLGIFNYEEVLDYSPVLGSFLIGSCIIFMTFVVLNLFISVILVAFNEEQKYDQLSEEGE
IVDLLLMKILGFLGIKCKKEEPGNSSEQPK
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcgggcttggtgctcttggggcttgctccgaggtttagggccacaatctct
aacccagaggagggcaacttttgctcaaaaaaccaagtggccttcagagactcttgctat
gaatttgcgcctcttggtcgcaccttttatggggcccagagctggtgtgaggagcaaggg
gggcatttggtctttattcacgatgaagacacccaacagtttctgcagaagcacatctca
caggacagggaatggtggattggactcatagggaactcggctncagatggaaccacagaa
gggccagggagctggctggatacctcaaatgtgagctacagcccctggcacagaggacag
gcctctcctgcaccaaacacctgtggttacatcgggagagatgcttcctttgggtgggcg
gcgtcagacaactgcacgcagccgtttgccttcatctgcaagtttggtgctcgccagagt
ctggcctgtgatggcctcaatgccaccatgcactgtggctcaggggaggtcatccagatc
caggatgccttctatgggtgccagattccccattattgcacctagggtgctgcaggcccc
tcagaggaggaatgcagctgggccagcgtcaaggatgaagtggcaggccagtgccagggg
ctgcaagtatgccaggtggcagcagatgggacctactttggagacctgtgccccacccag
ggcagctacctgtgggtgcattaccagtgccaagaaggcctgcagctgatggtgtccaac
gagagtttcatctttgaaaatgtcaccatctccctcacatggctcctctctcccttcatt
ggaaatctgtcatgtataattagtacaggagatggccacactttcgatccctactacccc
cccagttcatccagcaacgtgacccaccagttcagagcccctggggaattcactgtgttt
gctgagtgcacaaccactgagtggcatgtgatggctcagaagcacgtgaccatccgagac
aagatggagaggctccatgtgaccgggtgctccagcctgtccaagtcaggagccagccct
ctctgccgcactgtctctggggacctgctgtggattcaggtggtacttgatggaggaact
ggggtgacttacactgcactgtttggtaacataaccctggctgagttcaccacaccgagg
ggcctgctaccctacaatctgaccctggacagagcagctcagcagaggatgggccccggg
atgcaccacctggagatccgagccaccagcaacactaccacctctgcaccctctagaaac
atcacagtccacttcatggaacttctgtcagggctacaggcctcctggggttctgaccac
ttggagcttggacaagacctactggtcaacatctcagtggctcatggcatcccagagggg
ctgacctttgaagtggcaggactcaatgcaaacttcagccatcaagaagaaagcctcaag
gggccatttgggatttaccatgtggcagttcctcttgaaggcacctttctggtcactgtg
acggtgaggaatgccttctcaaacttaagtttggaagtcggaagcatcgctgtcacagct
ccttccagtctacaagaaccatctggaacaaatgccaaggaaaagaatagagagaaaggg
aatgtgcgggtgtatgtggaacctggtcagtatgtgggtcctttcacgactgtgactctg
ggctggccagacagtgacaaggatttacgcttccagtggtcatgtggacattgctgagcc
cagcggagctactgtgttgagaggcagctgctctgcacagaccaaagggagctggtgctt
cctccgtcctgcctgccaccacccaactctgccatcaccctgcgcctggccacctggaga
ggcagggagctggagaaccgggaggagcagtgcctctatgtgtccgcccccctggaactc
aggcctcgagtcagttgtgagaactgcagaccagcgaatgccagtgaagatgtcgtgctc
agagtcaccatgcgggacaactcctcagtggccatgttcaactggtatttagaggacacc
tgtctggagaaggctgagcctctcccggctgcctgcggattccaggaattttggctgagt
gctttaatcctccttcagagcaacacctccatgctgcggttgaacagctccttcctgcag
acctggggccaggccatccggatcagagccacagcagtgactgggcatgcctatggggag
gacacctatgtgatcagctctctgcctccccctgaggtgcccatctgcaccatcacccca
gaggagggtaccattctgacacgcttcaccatcttctgcaacacatcctcggccctgggc
cccctggagtactgcttctgtctggagtcagaacaaatgcgatgccttatgccagaggtg
ggcccaagtgaccctcagaaggacaatgcctacaagcagtgtnnctaccttcagctggaa
cacatggagcaagagcttcagctggtggggccccgtggcttcccccagagccagagccac
gcccgggccctcagccaggtgcagatgctgaagggctgcctggggggacagctgggcacc
ccacccccagggtacaccagcttcttgatggcgagcaagcatcctcagggcctgccctgg
tggtgcgtcctggtgggctggctcctggtggcagccaccagcagcgtggcagcctttttc
accatgctctatggcctgcactatgggccgggcagctccctcaagtggctcatctccatg
gccgtctccttcgtggagagcgtgtttgtcacccagtccctgaaggtcagatgctttgca
gccttctttgcactggtcttgaagagagtggaaaatgaggaggagcctgtgacctccctc
ccaggacgtctgtctggcccaggcccttctgccttgtttcgagcacaaagatgcagcaga
aaggacatttaccagccgcctttggccattgacatcgagaagatgaaaaccacccatctc
aaggaacagaaggcatttgccttcatcagagaaatcttggcatacctgggcttcctgtgg
atgctgctgctggttgtctatgggcagagggaccccagcacctaccacttcaacagacac
cttgagcacagcttcacccagggcttttcagctgtgttaagcttcaaggaattcttcatg
tgggccaacaccaccctcgtgagcaacctgtacagtcattacccaagctttatcactgat
gggaactctaagctggttggcagtgcccagattcgccaagtgagggtcctggaaagctct
tgccctcttgccccacagctgcaggcttctcttgatggatgccatgcaccatattccctg
gatattgaagacctgtcagactatggggaaggctggaatgcctccatacccaataacagc
agtggcttttcccaggcttggcagtaccagagccagagccaatgccgagggtatcccatc
tggggcaaactcactgtgtaccggggaggaggttatgtggtccccttggggactgatcgc
aaaagtgcatcaagaattctccagtacctctttgacaacacctggctggacagactgacc
agagccgtttttgtggagttcattgtttacaacgccaacgtcaacccgttctgcatcatc
attctgaccctggagactagcgccctgggaaccttctttgcacatatgagcctgcagagc
ctgcgcctgtaccccttcactgacggctggcaccccttcgtgctagcagcagaggccatc
tacctcctgttcctcctctactacatgattttgcagggcaagctcatgaggaaacagagg
tggtgctatttccatagcaagtgaaatcttctggagctgaccatcatcctggccagctgg
agtgccctggcgatgtttgtgaagagggccatcctggcagaacgtgaaatccagtgctac
cggaaccatggggaggagggtatcagtttcagtgagacagcagcggctgatgctgccctt
ggctacattattgccttcctggtgttgctgtccacagtgaagctttggcatctgctcagg
ttgaaccccaaaatgaatatgatcacttcagccctacgccgtgcttggggggacatttca
ggctttatcatcatcatccttatcatgcttctggcttactccattgcatcaaacttaata
tttggttggaaactccattcctacaaaaccctctttgatgcagcagaaacgatgatcagc
cttcagctaggaatctttaactatgaggaggtcctagactacagcccagtgcttggctcc
ttcctgattgggtcttgcatcattttcatgacatttgtagtgctgaatctatttatctct
gtcatcctggtggccttcaatgaggagcaaaaatatgatcagctgtcggaggaaggagag
attgttgatttgttgctgatgaaaatacttggtttcctgggtattaaatgtaaaaaagag
gagcctggaaacagcagtgagcagcccaagtag
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integrated database retrieval system
