Zalophus californianus (California sea lion): 113935591
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Entry
113935591 CDS
T07874
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113935591 (TDRD12)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
113935591 (TDRD12)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113935591 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
113935591
NCBI-ProteinID:
XP_027473620
UniProt:
A0A6J2EX48
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All DBs
Position
17:41321000..41387406
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AA seq
1307 aa
AA seq
DB search
MLEVLVLKIEDPGCFWVIIKGCSPFLDHEVDYQKLNSAMNDFYNSMRQDIEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIVSSADHYLAECFLVDFAKYIPVKSKNIRVAVETFMQLPY
RAKKFRLYCTKPVTLHIDFCEDSAEIVPAKKWDSAAIQYFQNILKATTQVEAKLCAVEED
TFEVYLYATIRNEKVCVNDDLVAKNFARYISPKKNKNIDSVEKSRLSIKSASFSSKLNPA
LTLWPMFLQGKDPQGMENSHGLTFLAQSLQHPGPKGVVGDLGPTAIYLDKTIKCNLDSLR
GSPKKKPEKKQQCISLKDVNKCVESSMYWPTKRGITLYAEPDTPATSALCQKPNEKPLRL
AEKKEHNEKNGCVKLLQFLNPDPLRTDGISDLQQLQRLRSGSQQPLAVLRHKIEPCLSID
ASPLSADMRKALRRNKFPGPRLAESHSWPPIARGCDAVVISHRGNDPLLYLPPVLTILQT
GGCYKSLPRRNGPLAVIVCPGWKKAQFTFELLEDYSTSSRPLHPMLLIIGLHKDEAKNMK
LPRGCDIIVTTPHSLLRLLKYQSLLFLRLCHLILDEVEVLFFEATEEMFAILDNLKKNID
VEERESAPHQIVAVGVHWSRHIEQLVGGFMNDPYIVVTAVEEAALYGSVQQVVHLCLECE
KTSTLLQTLDFIPSQAQKTLIFTGSVAETEIVCKVVESSSIFCLKMHKEMVFNLKSVLEQ
WKKKLSSGSHIVLALTDDCIPLLTITDATCVIHFSFPSSPRIFGGRLYCMSDHFQSSTEQ
GSPAEQGDKKTKSVLLLTERNACHAVGVLRYLERADAKIPSELYEFTAGVLEAKEDKKAR
RPLCPYLKAFGFCKDKRICPDRHRVNPEIDMPRKLSNQTLPTFGYIKIIPFYISNATHYF
GRIIDKQVDLYATLNAEMNEYFKGNSNKTTVEKVEKLRLYGLAEKTLYHRVEVLELSQKE
DTWGPDSVLVKFIDEGRTGLVTRNQLLHLPENFHTLPPQAVEFIVCRVKPADNEVEWNPK
VTRYIHHKIIGKLHDAKVMLALGNTVWIDPMVHITKLSNLKTSVIDYNVRTEILSMGMGI
DNSEHIEQLKTLHEGAKMPPDEESLSQALAPSPAEDAACPQSPQQEDRGSERGSHSGTKP
ENQKHETLPENTSDSPFHRTTEPLKSFHPQIKWFQKDDVVILKIRIRNVKDYKCEYFQDR
VIFSGWAGEKFYLADMELQANIAKDACKCVITNEEPVITLAKETRGSWCSLLKQRNPNVA
FDFDHWEEGEEDSQFPQVVKSKNLPCRVAEVAESGGRTSEGDGGESE
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtgctggtgctgaagattgaagatccaggatgcttctgggttattataaaa
ggatgtagtccgtttttagatcatgaagttgattaccaaaaactaaatagtgccatgaat
gacttctataatagcatgcgtcaagatatagaaataaaaccgttaatgttggaagaaggg
caggtctgtgtggtgtattgtcaggaactgaagtgctggtgcagggctgttattaagtcc
attgtgtcttcggcagaccattacctggcagaatgtttccttgtggattttgccaagtac
atcccagtgaaatctaaaaacatccgagttgcagtagaaacttttatgcagcttccctac
cgagcgaaaaaattcaggctgtactgcacgaagcctgttacgttacatattgacttctgt
gaagacagcgctgagattgtacctgccaagaagtgggacagtgcagctattcagtacttc
cagaacatcctaaaagcaaccacccaggtggaagccaagttgtgtgctgtggaagaagat
acttttgaggtctacctttatgcaactataagaaatgaaaaagtctgtgttaatgatgat
ctggttgcgaagaacttcgctcgttacatatcacccaagaagaataaaaacattgattct
gtagagaaatcaagattgagtataaagtcagcatccttttccagtaaactcaatccagcg
cttactctttggcccatgtttttgcaaggaaaagacccacaaggaatggaaaattcacat
ggtttaacttttctggctcagtccctccagcatccggggcccaagggtgttgttggtgac
cttgggccaactgctatatatctggataaaactataaaatgtaatctggattcattgaga
ggttcacctaaaaaaaagcctgaaaagaaacaacagtgcatctctttgaaagatgtaaat
aagtgtgttgaatcctccatgtactggccaacaaagagggggataaccttatatgctgag
ccagatacaccagcaacaagtgctttatgtcagaagccaaatgagaaaccacttaggttg
gctgagaagaaagaacacaatgagaagaatggctgtgtgaaattgttgcagtttttaaat
cctgatcctttgagaactgatgggatctctgatctacagcagttgcagaggctgcgttct
ggctcccagcagcccttggccgtgctcaggcacaagatcgagccttgcttgtccattgac
gcgtcgccactttcggcagacatgagaaaggctcttcgaagaaacaagttcccaggacct
aggctcgcggaatcccactcttggccccccatagcccggggctgcgacgcggtggtcatc
tctcaccgcggaaacgatcctctgctgtacctcccgccggtgcttacaattctgcaaacg
gggggctgctacaagtctttaccacgtagaaatggacctctggcagtcatcgtgtgccct
gggtggaaaaaggcccaatttacttttgaattactggaagattatagcacatcctccagg
cctcttcatcccatgttgttaataatcggactccacaaagatgaagccaaaaacatgaag
cttccaagggggtgtgacatcattgttacaacaccccacagcctcctgagacttctcaaa
taccaaagcttgttatttcttagactctgtcacctcatcttggatgaggtggaagtgtta
ttctttgaagctactgaagaaatgtttgctatattagataacttaaaaaaaaatattgat
gttgaagaaagggaatctgcaccacatcagattgttgcggtcggcgttcactggagcaga
catatagagcagctggtcggagggttcatgaacgacccctacattgtggtcacagccgtg
gaagaggccgctctctatggcagcgtccagcaggtagtacacctttgcctagaatgtgaa
aaaacctctactttactccagactttggatttcattccaagtcaagcacaaaagaccttg
atcttcaccggctctgtagctgaaacagaaatagtgtgtaaggtagtagaaagcagttca
atattttgcttgaaaatgcataaagaaatggtttttaatttaaaaagtgttttagaacag
tggaagaagaagttaagttctggctctcacattgtattagccttaacagatgattgcata
ccgctcttgaccatcaccgatgccacgtgtgtgattcacttcagctttccttcctcaccc
agaatctttggtggacgcctgtactgcatgtctgatcattttcagagttccaccgagcag
ggttctcctgcagaacagggagataagaagaccaaatccgtcttgctgctgacagagagg
aacgcgtgccacgcggtcggcgtcctgcgctacctggagcgggcagatgccaagattccc
tcagagctgtatgagtttactgcaggggttctggaagccaaagaagataaaaaagccaga
aggcctctttgtccgtatcttaaggcttttggtttttgcaaagacaaaaggatctgtcct
gatagacaccgtgttaatccagaaatagatatgccaaggaaattatccaatcaaactcta
ccaacatttggatacatcaaaataatacccttttatatttcgaatgcaacacattatttt
ggtcgtataattgataaacaagtggatctttatgcaactcttaatgctgaaatgaatgag
tattttaagggtaacagcaataaaacgactgttgaaaaggtggagaaactcagattatat
ggattagcagaaaaaacactttatcacagggttgaggtgctggagttgagccaaaaagaa
gacacctggggtccggacagcgtccttgtgaagtttatagatgaaggccggactggactc
gtcacaaggaaccaactgctgcatcttccggaaaatttccacactctgcccccccaggcg
gtggagttcattgtttgcagagtgaaacccgctgacaatgaagttgagtggaatccaaag
gttactaggtacattcatcataaaattattggaaaattacatgatgccaaagtgatgttg
gctttaggaaatacagtgtggattgatccaatggtgcacattaccaaactttcaaatttg
aagacctctgttattgattataatgttcgtactgaaattttgtcgatgggaatgggcatt
gacaactcggagcatatagaacagctgaagacgttacacgaaggagctaaaatgccacct
gatgaagaaagcctgagccaggccctggcgccttctccagcagaagatgctgcttgtccg
cagagcccacagcaggaggacagaggctcggaaagaggttcccactccgggacaaaacca
gaaaaccaaaagcatgaaactttacctgaaaacacaagtgattctccctttcacagaacc
acagagcccctgaaaagcttccacccacagataaaatggttccaaaaagatgatgtggtc
atactgaagataagaataaggaacgtaaaagattacaaatgtgaatatttccaagataga
gtcattttcagtggctgggcgggagagaagttttacttggctgacatggagctgcaggcc
aacatagcaaaagacgcctgcaaatgcgtgatcacaaacgaggaacctgtgatcactctt
gcaaaagagaccaggggatcttggtgcagcttactcaaacagaggaatcctaatgtggct
tttgatttcgatcactgggaagaaggtgaagaggacagccagttcccccaggttgtgaaa
tctaaaaacctgccgtgcagagtggcagaggtggctgagagcggtggccggacatcggag
ggtgacggcggtgagagtgaatga
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