Zalophus californianus (California sea lion): 113935738
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Entry
113935738 CDS
T07874
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
113935738 (PUM1)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
113935738
NCBI-ProteinID:
XP_027473961
UniProt:
A0A6J2F0B9
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Position
4:complement(23320059..23457905)
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AA seq
1193 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGDKKNKGAFDGDKLGDLKEEGDVMDKTNGLPVQNGIDTDVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPSALAVQQLTAAQQQQYALAAAHQPHIGVF
SAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQ
QQAAAAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNS
ALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQ
AAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNSLASSSFYGNNSLSSNS
QSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSD
LYKRTSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLG
GLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLED
FRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVD
VFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEM
VRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI
LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS
QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE
PAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaagacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggcagcggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacggtcggagagtgggggactaggcgttagc
atggtggagtatgtgttgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgacaagaagaacaagggtgcg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttgccagtgcagaatgggattgacacagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaaggcctagcgcccttgctgtccagcagttgaca
gctgcccagcagcagcagtacgccctggcagcggctcatcagcctcacatcggtgtgttt
tcagcaggtttagcgcccgctgcgtttgtccccaatccatacatcatcagcgctgctccc
ccggggacggacccctacacagctggactggctgcagcggcgacactaggcccggctgtg
gtccctcaccagtattatggagtcactccctggggagtctaccctgccagtcttttccag
cagcaagcggctgccgccgcggcagcaactaattctgcgaatcagcagactaccccacag
gctcagcaagggcagcagcaggttctccgtggaggagccagccagcgtcctttgacccca
aatcagaaccagcagggacagcaaacagatccgctagtggcagctgcagcagtgaattct
gcccttgcttttggacaaggactggctgcaggcatgccaggttacccagttttggctcct
gctgcttactatgaccaaacgggcgcccttgtggtgaatgcaggagcgagaaatggtctt
ggagctcctgttcggcttgtagctcctgccccagtcatcatcagttcctcggccgcgcaa
gcagctgttgcggcggccgcagcttcagcaaatggagcagccggtggtcttgctggaaca
acaaatggaccatttcgccctttaggaacccagcagccccagccccagccccagcagcag
cccagtaacagcctggcatccagctctttctatggcaacaactctctgagcagcaattca
cagagcagctccctcttctcccagggctctgcccagcctgccaacacatccttgggattc
ggaagtagcagttctctcggcgccaccctgggatcagccctcggagggtttggaacggca
gttgcaaactccaacactggcagtggctcccgccgtgactccctgactggcagcagtgac
ctttataagaggacatcgagcagcttgacccccattggacacagtttttataacggcctt
agcttttcctcctctcctggacccgtgggcatgcctctccctagtcagggaccaggacat
tcacagacaccacctccttccctctcttcacatggatcctcttcaagcttaaacctggga
ggcctcaccaatggcagtgggagatacatctctgccgcgccaggcgctgaagccaagtac
cgcagtgcgagcagtgcctccagcctcttcagccccagcagcaccctgttttcttcctcc
cggttgcgatatggaatgtctgacgtcatgccctctggcaggagcaggcttctggaggat
ttccgaaataatcggtaccccaatttacaactgcgggagatcgctgggcatataatggag
ttttcccaagaccagcatgggtccagattcattcagctgaaactggaacgagccacacca
gctgaacgccagcttgtcttcaatgaaatcctccaggccgcttaccagctaatggtggat
gtatttggaaattacgtcattcagaagttctttgaatttggcagccttgaacagaagctg
gctttggcagaacggattcgaggccatgtcctgtcattggccctgcagatgtatggctgc
cgtgttatccagaaagctcttgaatttattccgtcagaccagcaggtaattaacgagatg
gttcgggagttagacggccacgtcctgaagtgtgtgaaagaccagaatggtaatcatgtg
gttcagaaatgcatcgaatgtgtgcagccccagtctttgcagtttatcattgatgcgttt
aaggggcaggtatttgctttgtccacgcatccttatggctgccgagtgattcagaggatc
ctggagcactgtctccctgaccagacactccctatcttagaggagcttcaccagcacaca
gagcagcttgtacaggatcaatatggaaattatgtaatccagcatgtattggagcacggt
cgtcctgaggataaaagtaaaattgtagcagaaatccgaggcaatgtacttgtattgagt
cagcacaaatttgcaagcaatgttgtggagaagtgtgtcactcatgcctcccgtacggag
cgtgctgtgcttatcgatgaggtatgcaccatgaatgacggtccccacagtgccttatac
acaatgatgaaggaccagtatgccaactatgtggtccagaagatgatcgatgtggcagag
ccagcccagcggaagatcgtcatgcataagatccggccccacatcgccactctccgcaag
tacacctacggcaagcacattttggccaagctggagaagtactacatgaagaatggcgtt
gacttagggcccatctgcggtccccctaatggtattatctga
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