Zalophus californianus (California sea lion): 113935795
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Entry
113935795 CDS
T07874
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113935795 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113935795 (CNOT3)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113935795 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113935795 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
113935795
NCBI-ProteinID:
XP_027474086
UniProt:
A0A6J2F4S5
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All DBs
Position
17:56585986..56600062
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AA seq
744 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPSYPPGPPPAASALSTAPGNNGASTPAAPTSALGPKASP
APSHSSGTPAPYAQAVAPPAPSGSSTAQPRPPSVQPGGGGGTTNSSGGGGAGKQNGTTSY
SSVVADSPAEVALSSTGGGSASSQAPGPPSGPHNPPPSTSKEPSAAAPAGAGGVAPGSGN
NTGGPSLLVPLPVNPPSSPTPSFSEAKAAGALLNGPPQFSTAPEIKAPEPLSSLKSMAER
AAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCPLGPVPLTK
EQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTE
TLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDY
EKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccacaacgcagccaacgcgaaccag
aaagaaaagtatgaggctgatctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtagcatccaacgagatcaaggacaagagacagctcatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggagcgagagaccaagact
aaggcctacagcaaggagggcctgggcctggcacagaaggtggaccctgcccagaaggag
aaggaggaggttggccagtggctcacgaacaccattgacaccctgaacatgcaggtggac
cagtttgagagtgaagtagagtcactgtccgtgcagacgcgcaagaagaagggtgacaag
gatcagaagcaggaccggatcgagggcctgaagcggcacatcgagaagcaccgctaccac
gtgcgcatgctggagaccatcctgcgcatgctggacaacgactccatcctcgttgacgcc
atccgcaagatcaaggacgacgttgagtactatgttgactcatcccaggaccccgacttc
gaggagaatgagttcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctcccccccaagccacagtcacatggaggatgagatcttcaaccagtcgagcagc
acacccacctcgaccacctccagctctcccatcccgcccagcccggccaactgcaccacg
gaaaactctgaagatgacaagaagaggggacgctcgacggatagcgaagtcagccagtct
ccagccaaaaatggctccaagcctgtccacagcaaccagcaccctcagtccccggctgtg
ccgcctagctacccacctggccccccacctgccgcctctgccctgagcactgcccctggc
aacaatggggcctctaccccagcagcgcccacaagcgccctgggccccaaggccagccca
gctcccagccacagttcaggcacccctgcaccctacgcccaggctgtggccccgccggcc
cccagcgggtccagcaccgcccagccccggccccccagcgtccagcctggcggcggcggg
ggcaccactaacagcagcggaggcggaggcgctggcaagcagaacggcaccaccagttat
agctcggtggtggcagacagcccggcagaggtggctctcagcagcactgggggcggcagt
gccagcagccaggctccgggccccccgtcaggcccccacaacccgccgcccagcacctcg
aaggaacccagtgcggcggccccagcaggggctgggggtgtggccccaggctcagggaac
aacacagggggacccagtctcctggtgccacttcccgtgaaccctcccagctccccaaca
cccagcttcagcgaggccaaggcagccggcgccctgctcaacggacctccacagtttagc
actgccccagagatcaaggcccccgagcctctgagctctctcaagtccatggcggagcgg
gcagccatcagctccggcattgaggaccccgtgcccacgctgcacctgacggagcgagac
atcatcctgagcagcacctctgctccgccggcctcggcgcagccgcccctgcagctgtcg
gaggtcaacatccctctgtcactgggcgtatgtccactggggcctgtgcccctcaccaag
gagcagctctaccagcaggccatggaggaggccgcctggcaccacatgccccacccctcg
gactccgagcgcatccggcagtacctcccccggaacccctgcccgacgcccccctaccac
caccagatgccacccccacactcggacaccgtggagttctaccagcgcctgtcaacagag
acactcttcttcatcttctactatctggagggcaccaaggcgcagtacctggcagccaaa
gccctaaagaagcagtcgtggcgattccacaccaagtacatgatgtggttccagaggcac
gaggagcccaagaccatcacggacgagtttgagcagggcacctacatctactttgactac
gagaagtggggccagcggaagaaggaaggcttcaccttcgagtaccgctacctggaggac
cgggacctccagtga
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