Zalophus californianus (California sea lion): 113936137
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Entry
113936137 CDS
T07874
Symbol
NLRC5
Name
(RefSeq) protein NLRC5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
zca04054
]
113936137 (NLRC5)
Pattern recognition receptors [BR:
zca04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113936137 (NLRC5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atypical_Card
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
AAA_16
AAA
NOD2_WH
NPHP3_N
nSTAND3
AAA_33
AAA_22
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
113936137
NCBI-ProteinID:
XP_027474910
UniProt:
A0A6J2F0P1
LinkDB
All DBs
Position
17:complement(27360111..27444347)
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AA seq
1888 aa
AA seq
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MDLVSLQLGTEHLWSWLVRLLSKDPEWLNAKVKFFLPKMELSSGDKAQDATQGVILQLRR
LHAHGWATWQAFIHCVCMELDVPLDLEVPLLSTWGHRDGFPSQLEAGEESQPASQLHHGL
KRPYQGCGSSPHPKQCKKQQLELARRYLQLLKTSAQERYGSRIPGPGQPLAFHQAYIPPI
LQWSRTTAPFNTQEGATLGDPKAEDGTDVSIQDLFNTRANKGPRVTVLLGKAGMGKTTLA
HRLCQRWADGQLDRFQALFLFEFRQLNLITHLLTLPQLLFDLYLSPEAGPDSVFQYLEEN
ADGVLLIFDGLDQALHPHSSREKEGPEDPSPALALFSGLCRGTLLPGCWVLATSRPGKLP
NCLPTEAATVHMWGFDRPRVEEYMVRFFTDQLRQEAALAELRKNRHLQSMCAVPALCQVT
CLCLHHLLPCSSPGQSASLLPTVTQNYVQMVSILGPRGYPPPESLLDLSEVALRGLETGK
VIFSVGDIRPSTMAFGAALGLLTSFCVCTGPGHQGTGYAFTHLSLQEFFAALYLMASPKV
DKNALAGHVALNSRWVLRTKARPGLLDHLPSFLAGLASYACRPFLSHVARRDGTWVGAKQ
ATVMQALRKLATRRLTGPKVVALCHCVGETQEPELASLVAQSLPCHLSFHNFPLTFADLA
ALTNILGHRNAPIHLDFEGCPLEPHCPEALAGCKQVENLSFKSRKCGDAFAEALSRSLPT
MRSLKKLGLAGSKITARGISHLVQALRLCPQLEEVSFQDNQLKDWAVLNIVEVLPCLPRL
QKLDLSRNNVSVSTLLCLTKVAVACPTVRTLQVREGDLIFLLSPPAETAAELRGQSASDT
VIPSWKRDHGSSDRAPDLQGNASQRKEAQSRSLTLRLQQCQLRVHDVQELIAQLQEGPRL
DDVDLSGNQLDDEGCRLMAEAASQLHITRNLDLSDNGLSVDGVHCVLSAVSTCQALADLH
ISVLHKTAVFVFAPEQEQLKEIQKRAAPRVSLTCRTPSERPLCPTRIRLTHCGLQAKHLE
QLCRALRGRCCHTHLDFSGNALGDEGAAQLAQLLPGLGPLQSLDLSENSLSLDAVFMLTP
CFSTLQWLLHLDISLESQHVVLRGDRTGRDQLAGGSLPEFPAGAQFLAFRQPRVRRSLCL
RQCQLDPLSLTHLCETLEKCPGPLEVKLSCEVLSDQSLETLLHHLPQLPQLSLLQLSKTS
LSPKSPLLLADLFSLCPRVQKVDLRSLYHVTLHFRSSKEREGECCGRFTGCSLSQEHVEP
LCWLLSKCEDLNQLDLSANMLGDDGLRCILECLPQLPISGSLDLSHNNISLESALGLVKT
FPSCPRIREASVNLGSEQSFWIHFSRQEEAGKTLRLSQCSFGPEHVPILATNLNQALQLT
ALTITQCCLDLEQLTLLLSLLRWPVGLFSLRVDEPWVGKAGVLALLEVCTQASGNVTEIS
ISEIQQQLCLQLEFPRQGNPEAVALRLSHCDLGTHHSLLSWQLMETCARLRQLSLSQVNL
CNTSSLLLQSLLESLSELKTFRLTSSHVSSEGLAHLTSGLSHCHHLEGLDLSNNQFGEED
TEVLMGVLEGMCRLKRLDLSHLPLGSSALAMLTQGLSHMTLLQSLRLSRNGIRDVGWYQL
FKALRAASSLKELGLSHNQIRDIGAQHLAAVLPWLPELRKIDLSGNGIGPAGGVRLAESL
ALCKHLEELMLGYNVLGNSTALELAQRLPQHLRVLHLPSSGLHQEGVLILSRALDGLPYV
EEINLAENCLAREVPHFHQGLPLLRQIDLVSCEIDNHAAKPLAASLALCPALEEILLSWN
LLGDEAAAELAQVLPQMSRLKRMDLEKNQITACGAWLLVEGLAQGSGIQVIRLWNNPISP
DMAQRLQSQEPRLDFAFFDKQPQPPRGS
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgttagcctccagctgggcaccgagcacctgtggagctggctcgtgaggctg
ctcagtaaagacccagaatggctgaatgccaaggtgaagttcttcctccccaagatggag
ctgagctccggggacaaggcccaggatgccacacagggggtcatcctacaactcagaaga
ctgcacgctcatggctgggccacttggcaggctttcatccattgcgtgtgcatggagctg
gacgtaccgctggacctggaggtgccgctgctgagcacctggggccacagagacgggttc
cccagccagctggaggctggtgaagaaagccaacctgcctctcagctccaccatggcctc
aagcggccttatcagggctgtgggtcctcaccccacccgaagcagtgcaagaagcagcag
ctagagctggccaggaggtacctgcagctgctgaagacttctgcccaggagcgctatggc
agccggatcccggggccagggcaaccccttgccttccaccaggcctacatccccccaatc
ctgcagtggagccggaccacggcacccttcaacacccaggagggggccaccctgggggac
cccaaggcagaagatggcactgatgtgagcatccaggacctcttcaacaccagggccaac
aagggcccgagggtgacggtgctcctgggcaaggcgggcatgggcaaaaccaccctggcc
caccgactctgccagaggtgggctgacggtcagctggaccgcttccaggccctgttcctt
ttcgagttccgccagctcaacctgatcacacatctcctgacgctgccccagctccttttt
gacctgtacctgagccctgaggcgggccctgactcggtcttccagtacctggaggagaac
gctgacggagtcctgctgatctttgatgggctggaccaggccctccacccccattccagc
agggagaaggaaggtcctgaggacccaagtccggcccttgccctcttctctggcctctgc
cgggggaccctgctgcctggctgctgggtactggccacctcccgtccagggaagctgccc
aactgcctgcccacagaggcagccacggtccacatgtggggttttgacaggccgcgggtg
gaggagtacatggtccgcttcttcacggaccagctgcggcaggaggcggccctggccgag
ctgcggaaaaacagacatctccagagcatgtgcgcggtgcctgcgctctgccaggtcacc
tgcctttgcctccaccatctgctcccatgcagctctccaggccagtctgcgtccctcctg
cccaccgtgactcagaactatgtgcagatggtgtccatcctcggcccccgagggtacccg
cctcccgagtccctgctggacctcagtgaggtggccctgaggggcctggagaccggcaag
gttatcttttctgtaggagacatccgtccgtccacgatggccttcggggctgccctcggc
ttgttgacctccttctgcgtctgcacgggccccgggcaccagggtacaggctatgccttc
acccacctcagcctacaggagttttttgctgccttgtacctgatggccagccccaaggtg
gacaaaaatgcacttgccggccacgtcgccctcaattctcgctgggtgctacggaccaaa
gctcggccggggctcctagaccacctcccctccttcctggcggggctggcgtcgtacgcc
tgccggcccttcctcagccacgtggcccggcgggatgggacgtgggtgggtgccaagcag
gctacggtgatgcaggccttgaggaagttggccacccgcaggctcacggggccgaaggtt
gtagcactctgtcactgcgtgggggagacccaggagcccgagctggccagccttgtggcc
caaagtctcccctgtcacctgtctttccacaatttcccactgacctttgccgacctggct
gccctgaccaacatcttggggcacaggaatgcccctattcacctggattttgagggctgc
cccctggagccccactgccctgaggccctggcaggctgtaagcaagtagagaatctcagc
tttaagagcaggaaatgtggggacgcctttgcagaagccctctccaggagcctgccaaca
atgcggagcctgaagaagctggggttagcaggaagtaagatcactgcccgaggcatcagc
cacctggtgcaggctttgcgcctctgtccacagctggaagaggtcagctttcaggacaac
cagctcaaggactgggctgtgctgaacatcgtggaggtacttccttgtttgccacggctc
cagaagcttgacctgagccgcaacaatgtgtccgtgtcaaccttactctgcttgacaaag
gtggcggtcgcatgccctactgtcaggaccctgcaggtcagggagggggacctcatcttc
cttctttctccgcccgcagaaactgctgcagagctgcgaggtcaatctgcgtcagatact
gtcatcccatcttggaagagagaccatggaagctcagatagagcgccagacctacaggga
aatgccagccagaggaaagaggctcagagcagaagcctgacactcaggctccagcagtgt
cagctcagggtccatgacgtgcaggaactcatagcccagctccaggaaggcccccgcctg
gacgatgtagacctttcaggaaaccagctggacgatgaaggctgtcgactgatggcagag
gccgcatctcagctgcacatcaccaggaatctggacctcagcgacaacgggctctctgtg
gacggggtgcattgtgtgctgagtgcggtgagcacgtgccaggccctggcagacctacac
atcagcgtgctgcacaaaactgcggtcttcgtatttgccccagagcaggagcagctgaag
gagatccagaagagggctgcgcctcgggtcagcctgacgtgccggacgccctctgagcgg
cccctgtgccccacgagaatcaggctgacacactgcggcttgcaagccaagcacctcgag
cagctctgcagggcgctgagaggaagatgctgccacacccacctggacttctcaggcaat
gctctgggggatgaaggcgcagcccagctggcccagctgctcccagggctgggacctctg
cagtccttggacctcagtgagaacagtttgtccctggatgcggtgttcatgttgaccccg
tgcttttcaactctgcagtggctcctccacttggacatcagcttagagagccagcacgtc
gtcctgagaggtgacagaacaggcagggatcaattggctggtggatctttgccagagttc
ccggctggagcccaattcttggcctttcgtcagccccgcgtccgcaggagcctctgcctc
aggcagtgtcagctggatcccctgagcctcacccacctctgtgagactctggagaagtgc
ccggggcctctggaagtcaaattgtcctgtgaggtcctgagtgaccagagcctggagacc
ctgctgcatcacttaccccagctcccccagctaagcctgctgcagctaagcaagacgagc
ctgtccccgaagagccccctcctgctggccgatctcttcagcctgtgcccacgggttcag
aaggtggatctcaggtccctgtatcatgtgactctgcacttcaggtctagcaaggagcgg
gaaggcgaatgctgtggcaggttcacgggctgtagcctcagtcaggagcacgtggagccg
ctgtgctggttgctgagcaaatgtgaagacctcaaccagctggacctctccgcaaacatg
ctgggtgacgacgggctcaggtgcatcctggaatgtctgcctcagttgcccatctccggt
tcgcttgacctgagtcacaacaacatctccctagaaagcgccctgggcctggtgaagaca
ttcccctcctgcccacgcatccgggaggcctccgtgaacctgggctctgagcagagcttc
tggatccacttctccagacaggaggaggccgggaagacactgaggctgagccagtgcagc
ttcgggccagagcatgtgcccatactggccaccaacctgaaccaggccctacagctgacg
gcactcacgataacccagtgctgcctggacctggaacagctgacgcttctcctgagtctg
ctgaggtggccggtggggctgttcagtctcagggtggacgagccatgggtaggcaaagcc
ggggtgctcgccctgctagaagtctgcacccaggcctcaggcaacgtcactgaaataagc
atttccgagatccagcagcagctctgtctccagttggagtttccccgtcaggggaaccca
gaggccgtggccctcaggttgtctcactgtgaccttgggacccaccacagccttctttcc
tggcagctgatggagacatgtgccaggctgcggcaactcagcttgtcccaggtgaacctc
tgcaacactagctccctgctgctacaaagtctcctggagtccctctctgagctgaagaca
ttcaggctgacctccagccatgtgagctccgagggcctggcccacctgacatctggtctg
agccactgccaccacctggaggggctggacttgtccaacaatcagtttggtgaggaggac
accgaagtgctgatgggggtccttgaggggatgtgccggctgaagaggctcgacctcagc
catctcccgctgggcagctccgccctggccatgctcactcaaggactaagccacatgacc
cttctgcagagcctccgtctgagcaggaacggtattcgtgatgtcggctggtaccagctt
ttcaaggctctcagagcggccagcagcttgaaggagctgggcttgagccacaaccagatc
agagacatcggtgcccagcacttagctgctgtcctaccatggctgcccgagctcaggaag
atagacctctcagggaatggcattggcccagctgggggagtgcggttggcagagtctctc
gccctttgcaagcacttggaggagctgatgcttggctacaatgtcctgggcaatagcaca
gccctggagctggcccagagactgccccagcacctgagagtcctgcacctgccatctagc
ggtctgcatcaagagggggtgctgattctgagccgggccctggatggactcccatatgtg
gaggagatcaacttggcagagaactgtctggccagagaggtcccacatttccatcagggg
ctcccactgctcaggcagatagacctggtttcgtgtgagattgacaaccacgctgccaag
ccccttgccgccagcctggctctctgcccggccctggaggaaatcctgctgtcctggaat
ctgctcggggatgaggcggctgcggagctggcccaggtcctgccacagatgagccggctg
aagagaatggacctggagaagaaccagatcacagcttgtggagcctggcttctggtcgaa
gggctggcacaagggtctggcatccaagtcattcgcctctggaacaaccccatctccccc
gacatggcccagcgtctgcagagccaggagcccaggctggacttcgctttcttcgacaag
cagccccaaccccctcggggtagttga
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