Zalophus californianus (California sea lion): 113936406
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Entry
113936406 CDS
T07874
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zca03021
]
113936406 (TAF1C)
Transcription machinery [BR:
zca03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
113936406 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
113936406
NCBI-ProteinID:
XP_027475345
EnsemblRapid:
ENSZCAG00025024204
UniProt:
A0A6J2F1W9
LinkDB
All DBs
Position
17:4596397..4605561
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AA seq
856 aa
AA seq
DB search
MDFPSSLQPTLFMTGPLGLSNVPDMSFMCSWRDALTLPESLPENFKNEAPHLATGLLWEP
ETPGPLPLLPPGPDPWDPGVSAQDLLFRGAFPFRRKPQAVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFKLEGARSRSKKKTVVSVKSLLQDLGGHQPWGCPWAFLSYRQRRFSIIGGP
VLGKSVASLLGALLHEELAMRWEQLLLDDAFTGGALAWVPGRTPQVGQLVYPAGGALDTL
CFQEVRLPPGSDPQALGDPGHIRLRGPVRQVVTRTVQGESLLAVRSDYHCALWKVSKQGR
AAPLQVLQVGKGATGISLSPHLPGELAVCSRSGAVCLWTPQDGLQQVYKDPETLVFCDPS
PWRWADFTAHPRVLTVGDRTGVKIIDTQGPPGCGLLLFRGGAEASCRRGERVLLTQYLGE
CGPEPQLPTLHLICTQFSLYLVDERLPLVPMLKWEHNLPSAPLWARLLPPPCPGCPRPLL
LGGQGGHLQLLHLAGEGASAPRLAGPPQSLPSSSDSLSAFPLLEPKSQWRLQERLKAPTI
GLAATIPSSASEPVLSLFQLSAAGDVFHQHLHLQADPGPHSRAPTASWTPQATACCSRWL
KALLDVPPTPPVWAAPTFSHRRLLGCMEQRKVEQKGPEGLRAAMAAGRLLRQQDVGSPPS
AGPPPAPEPGPEDELSARLEAAWEGRMAAWWERQQGRSSGPGRQPKRRKRRTQLSSTFSS
LSGRLDLSDATSPPHSPDRASPEARPRPPVTPPSQESTQELWARGVPSERQQTLRDYMAR
LPLRGDAPRGVSSPLSGTSSVRATRSRPQTLQDGTAELPPRRNTRRGAAVSSSQTSSVWA
TPSRQQALRKKPRMGF
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctccctccaacccacgctgttcatgactggcccccttggtctgagt
aatgttcctgacatgtccttcatgtgtagctggagagacgccctgaccctgccggagtca
ctgcccgagaactttaagaatgaggcgccacacttggccacgggcctactctgggagcca
gagacccctggaccccttcctttgctgcctcctggtcccgatccctgggaccctggggtg
agtgcccaggacctgcttttccggggagctttcccgttccgaaggaagccccaagccgtg
ctagacgttaccgaacagctcagccgcttcctgtgggaccatggggacatagcctttgcc
cccctggggaagctgatgctggagaatttcaaactggagggagcacggagccgttctaag
aagaagacagtggtcagtgtgaagagtctactccaggacctcggtggacaccagccctgg
ggctgcccctgggctttcctcagctaccgacagcgccggttctccatcatcgggggccct
gtcctgggcaagtcggtggccagcctcctgggggcgctgctgcacgaggagctggccatg
cggtgggagcaactgctcctggacgatgcattcaccgggggcgctttggcctgggtgcct
gggaggacaccgcaggtgggacagttggtctaccccgcaggaggtgctctagacacgctc
tgtttccaagaggtccgtctgcccccgggcagtgaccctcaggctctcggggaccctggc
cacatccggctccgaggacctgtccggcaggtggtgacccgcactgtgcaaggggaatcc
ctgctggctgtccgctctgactaccactgtgccctgtggaaggtcagcaagcaggggcga
gccgcccctctccaggtgctgcaggtcgggaagggggccacggggatcagcctcagccct
cacctgcctggggagctggctgtctgcagccgttctggagccgtctgtctgtggaccccc
caggatgggctgcagcaagtctacaaggaccctgagacccttgtgttctgtgacccctct
ccctggcgttgggcagacttcaccgctcatccccgggtgctgacggtgggggaccgcact
ggagtgaaaattatcgacactcagggcccacccggctgtggtctgctgctcttccgtggg
ggggcggaagcgtcatgtcggagaggggaacgtgtcctgttgacccagtacttgggcgag
tgcggccccgagcctcagcttcccaccctccatctcatctgtacgcagttctcgctctac
ctggtggacgagcgcctccccttggtgcccatgctgaagtgggagcacaacctcccctcg
gctcccctgtgggcccggctgctgcccccgccctgccctggctgcccccggccactgctc
ctggggggccagggcgggcacctgcagctgctgcacctcgcaggagagggggcctctgca
ccccggctggcggggcccccccagtctctcccttccagcagcgactccctctccgcgttc
cccctgctggagcccaagagtcagtggcgtctgcaggagcgtctgaaagcgccaaccata
gggctggctgccaccatcccatcatcagcttccgagccagtcctgtcgctcttccagctc
tcggcggccggggatgtcttccaccagcacctccacctccaggcagaccccgggccccac
tcccgggcccccacagcttcctggactccccaggccactgcctgctgcagtcggtggctg
aaggccctgctggacgtgcccccgaccccgcctgtgtgggcagcacccacattttcccac
cgccgtctgctagggtgcatggaacagaggaaggtggagcagaaggggccggagggtctc
cgagcggccatggctgcagggcggctgctgcggcagcaggacgtgggctcgcccccgtct
gcggggccgccccccgcccccgagccaggccccgaggatgagctcagtgcccgtttggag
gcagcctgggaaggccgcatggccgcctggtgggagaggcagcagggcaggagctcgggg
cccggcagacagcccaagcggcgcaagcgccggactcagctgtccagcactttctcctca
ctcagcggccgcctggacctctcagacgccaccagcccccctcacagcccagaccgggcg
tcccccgaggccaggcctcggccaccagtgaccccgccctcccaggagtcaactcaggag
ctgtgggctcgaggggtcccctcggagcggcagcagactctccgcgactacatggccagg
ctgccgctccgaggggatgccccacgaggtgtcagctcacccctctccgggacctccagt
gtccgggccacgcgctccaggccccagaccctgcaggatggcacggccgagctgccgcca
cggaggaacacccggagaggtgccgctgtgtcctcctcccagacctccagcgtctgggcc
acgccctccaggcagcaagcgctgcggaagaagccccgcatgggcttctga
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