Zalophus californianus (California sea lion): 113936545
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Entry
113936545 CDS
T07874
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03022
Basal transcription factors
zca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113936545 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
113936545 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zca03021
]
113936545 (ERCC2)
03036 Chromosome and associated proteins [BR:
zca03036
]
113936545 (ERCC2)
03400 DNA repair and recombination proteins [BR:
zca03400
]
113936545 (ERCC2)
Enzymes [BR:
zca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113936545 (ERCC2)
Transcription machinery [BR:
zca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113936545 (ERCC2)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113936545 (ERCC2)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113936545 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
Motif
Other DBs
NCBI-GeneID:
113936545
NCBI-ProteinID:
XP_027475693
UniProt:
A0A6J2FCW1
LinkDB
All DBs
Position
17:complement(50188991..50203924)
Genome browser
AA seq
779 aa
AA seq
DB search
MGGQVGAPGAPAGLGGAVGVGLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLE
MPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEK
LPFLGLALSSRKNLCIHPEVMPLRFGKDVDGRCHSLTASYVRAQYQQDPSLPHCRFYEEF
DVHGRQVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAELV
SKELARKAVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQGNLETLQKTVLRIKETDEQRL
REEYRRLVEGLREASAARETDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVK
WRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLA
NFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTL
SPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYG
NLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVAL
EKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLR
DQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHL
TDANLNLTVDEGVQVAKYFLRQMAQPFHREDQLGLSLLSREQLESEETLRRVEQIAQQL
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggggggccaagtgggcgcgcccggggccccggcggggctagggggtgctgtaggagtc
gggctgaacgtggacgggctgctggtctacttcccttacgactacatctaccccgagcag
ttctcgtacatgctggagctcaagcgcacgctggacgccaagggtcatggagtcctagag
atgccctcaggcactgggaagacagtgtccctgttggccctgatcatggcgtaccagagg
gcgtatccactggaagtgactaaactcatctactgctccaggactgtgcctgagattgag
aaggtgatcgaagagctgcggaagttgctcaacttctatgagaagcaggagggtgagaag
ctaccgtttttggggctggctctgagctcccggaagaacctgtgtattcatcctgaggtg
atgcccctgcgctttgggaaagacgtcgacgggagatgccacagcctcacagcctcatac
gtgcgggcgcagtaccagcaggaccccagcctgccccactgccgcttctacgaggagttt
gatgtccatgggcgccaggtgcccctccctgctggcatctacaacctggatgacctcaag
gccctgggacggcgccagggctggtgcccctacttcctcgcccgctattcgatcctgcac
gccaacgtggtggtttacagctaccactacctcttggaccccaagattgcagagctggtg
tctaaggagctggcccgcaaagctgtcgtggtcttcgacgaggcccataacatcgacaac
gtctgcatcgactccatgagtgtcaacatcacccgccggaccctcgaccgctgccagggc
aacctggagaccttacagaagacagtgctcaggatcaaggagacagatgagcagcgtctg
cgggaagagtaccgacgcctggtggaggggctgcgggaggccagtgctgcccgggagacg
gacgcccacctggccaaccccgtgcttcctgacgaggtgctacaggaggctgtacccggt
tccatccgcacggccgagcacttcctgggcttcctgcggcggctgctggagtacgtcaag
tggcggctgcgggtccagcacgtggtgcaggagagcccccctgccttcctcagtggcctg
gcccagcgcgtgtgcatccagcgcaagcccctcagattctgtgccgagcgtctccgctcc
ctgctgcacaccctggagatcgctgaccttgccgacttctctcccctcaccctcctggct
aacttcgccacccttgtcagcacctacgccaagggtttcaccatcatcatcgagcccttt
gatgacaggacccccaccattgccaaccccatcctgcacttcagctgcatggacgcctca
ctggccatcaaacctgtgttcgagcgcttccagtctgtcatcatcacatccgggacgctg
tcaccactggacatctaccccaagattctggacttccaccctgtcaccatggcaaccttc
accatgacgctggcccgggtctgcctctgccccatgatcattggtcgtggcaacgaccag
gtggccatcagctccaagtttgagacccgggaagatattgcggtgatccggaactatggg
aacctcctgctggagatgtccgccgtggtccctgatggcatcgtggctttcttcactagc
taccagtacatggagagcactgtggcctcctggtacgagcagggcattcttgaaaacatc
cagaggaataagctgctcttcattgagacgcaagatggggccgagaccagcgtcgccctg
gagaagtaccaggaggcctgtgagaatggccgtggagccatcctgctgtccgtggcccgg
ggaaaagtgtccgagggaatcgactttgtgcaccattacgggcgcgcagtcatcatgttc
ggcgtcccttacgtctacacgcagagccgcatcctcaaggcacggctggagtacctgcgg
gaccagttccagatccgagagaatgactttctcacctttgatgccatgcgccacgcggcc
cagtgcgtgggccgggccatccggggcaagacggactacggcctcatggtctttgccgat
aagcggtttgcccgggcagacaagcgtgggaaattgcctcgctggatccaggagcacctc
actgacgccaacctcaacctgaccgtggatgagggggtccaggttgccaagtacttcctg
aggcagatggctcagccattccaccgggaggaccagctgggcctgtccctgctcagccgg
gagcagctggaatctgaggagaccctgcggagggtggagcagattgctcagcagctgtag
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