Zalophus californianus (California sea lion): 113936633
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Entry
113936633 CDS
T07874
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113936633 (CTCF)
03036 Chromosome and associated proteins [BR:
zca03036
]
113936633 (CTCF)
Transcription factors [BR:
zca03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113936633 (CTCF)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113936633 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
113936633
NCBI-ProteinID:
XP_027475890
UniProt:
A0A6J2F3G2
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All DBs
Position
17:complement(18356699..18406013)
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gaaagaaagacttaccagagacgccgggaagggggccaggaagaggacacttgtcacctg
ccccagaaccagactgatgggggtgaggtggtccaggacgtcaatagcagtgtacagatg
gtaatgatggaacagctggatcccacccttcttcagatgaagactgaagtaatggagggt
acagtcgctccagaagcagaggctgctgtggacgatacccagatcataaccttgcaggtt
gtaaatatggaggaacagcccataaacataggagagcttcagcttgtccaagtacccgtt
cccgtgactgtacctgttgccaccacttcggtagaagaacttcagggggcttacgagaat
gaagtgtctaaagagggccttgcagaaagcgaacccatgatatgtcataccttacctttg
cctgaagggtttcaagtggtgaaagtaggggccaatggagaggtggagacgctagagcaa
ggggaacttccgcctcaagaagatcctagttggcaaaaagacccagattatcagccgcca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtctacgattttgaggaagagcagcaggagggtctgctatcggaggtt
aatgcagagaaagtggttggtaacatgaagcctccaaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctgtgcagttatacatgtccacggcgttcaaat
ttggatcgtcacatgaaaagtcacactgatgagagaccacacaagtgccatctctgtggc
agggcattcagaacagtcaccctcctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgtgacatggcctttgtgactagtggagaattggtgcggcat
cgtcgttataaacacacccatgagaagccatttaagtgttccatgtgcgattacgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcatactggggagcgtccgttccag
tgcagcttgtgcagttatgccagcagggacacatacaagctgaaaaggcacatgagaact
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctacattgagcaaggcaagaaatgtcgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcatcagaagtcacacaagaacgagaagcgctttaagtgtgaccagtgt
gattacgcttgcagacaggagaggcacatgatcatgcacaagcgcacccacactggggag
aagccttatgcctgcagccactgcgacaagaccttccgccagaaacagctcctcgacatg
cacttcaaacgctatcatgaccccaactttgtccctgcggcctttgtctgttctaagtgt
gggaaaacctttacacgccggaataccatggcaagacatgctgacaattgtgctggtcca
gatggcgtagaaggggaaaatggaggggaaacaaagaagagtaaacgtggcagaaaaaga
aagatgcgttccaaaaaagaagactcctctgacagtgaaaatgctgagccagacctggat
gacaatgaggatgaggaggaacctgctgtggaaattgaacccgagccagagcctcagcct
gtgaccccagccccaccccctgccaagaagcggagaggacgccctcctggcagaaccaac
cagcccaaacagacccagccaacagccatcatccaggtggaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagacgcagagcccgtggagggggag
gaagaggaggcccagccagccgccacagacgcccccaacggagacctcacgcctgagatg
atcctcagcatgatggaccggtga
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