Zalophus californianus (California sea lion): 113936636
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Entry
113936636 CDS
T07874
Symbol
PSMC4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03050
Proteasome
zca05010
Alzheimer disease
zca05012
Parkinson disease
zca05014
Amyotrophic lateral sclerosis
zca05016
Huntington disease
zca05017
Spinocerebellar ataxia
zca05020
Prion disease
zca05022
Pathways of neurodegeneration - multiple diseases
zca05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
113936636 (PSMC4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
113936636 (PSMC4)
09164 Neurodegenerative disease
05010 Alzheimer disease
113936636 (PSMC4)
05012 Parkinson disease
113936636 (PSMC4)
05014 Amyotrophic lateral sclerosis
113936636 (PSMC4)
05016 Huntington disease
113936636 (PSMC4)
05017 Spinocerebellar ataxia
113936636 (PSMC4)
05020 Prion disease
113936636 (PSMC4)
05022 Pathways of neurodegeneration - multiple diseases
113936636 (PSMC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zca03051
]
113936636 (PSMC4)
Proteasome [BR:
zca03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
113936636 (PSMC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
AAA_14
Mg_chelatase
TIP49
NTPase_1
TsaE
ATPase_2
NACHT
CCDC136_middle
AAA_3
AAA_7
NB-ARC
AAA_18
AAA_33
Parvo_NS1
AAA_17
AAA_lid_PRS2_C
AAA_25
IstB_IS21
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
113936636
NCBI-ProteinID:
XP_027475895
UniProt:
A0A6J2F3G7
LinkDB
All DBs
Position
17:47054958..47063806
Genome browser
AA seq
418 aa
AA seq
DB search
MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaataggcatcttagtggagaaagctcaggatgaaatcccagcactgtctgtg
tcacggccccagactggcctgtccttcctggggcctgagcccgaggacctggaggacctg
tacagccgctacaagaagctgcagcaagagctggagttcctcgaggtgcaggaggaatac
atcaaggatgagcagaagaacctgaagaaggaattcctccatgcccaagaggaggtgaag
cgaatccagagcatcccactggtcatcggacagtttctggaggctgtggatcagaataca
gccattgtgggctccaccacaggctccaactactatgtgcgcatcctgagcaccattgac
cgggagctgctcaagcctaatgcctcagtggccctccacaagcacagcaatgccctggtg
gacgtgctgcctcccgaggcagacagcagcatcatgatgctcacctcagaccagaagcca
gacgtgatgtatgcagacatcgggggcatggacatccagaagcaagaggtgcgggaggct
gtggagctcccgcttacacactttgagctctataagcagatcggcatcgaccctccccga
ggcgtcctcatgtacggcccacctggctgcgggaagaccatgttggcaaaggccgtggct
catcacacgacagctgcgtttatccgggtcgtgggctcagagtttgtacagaagtacttg
ggcgagggcccccgcatggtccgggacgtgttccgcctggccaaggagaacgcacctgcc
atcatcttcatagatgagattgatgccattgccaccaagagatttgatgcccagacaggg
gctgacagggaggttcagagaatcctgctggagctgctgaaccaaatggatggatttgac
cagaacgttaatgtcaaggtgatcatggccacaaacagagcagacactctggatcctgcc
ctgctgcggccaggacgccttgaccgtaaaatcgaatttccactccctgaccgccgccag
aagaggttgattttctccactatcaccagcaagatgaatctctctgaggaggttgacttg
gaagattatgtggcccgaccagataagatttcaggagctgatattaactccatctgtcag
gagagcggaatgttggccgtccgtgagaaccgctacattgttctggcaaaggacttcgag
aaagcgtacaagacagtcatcaagaaggacgagcaggagcatgagttttataagtga
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