Zalophus californianus (California sea lion): 113936712
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Entry
113936712 CDS
T07874
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zca04812
]
113936712 (KATNB1)
Cytoskeleton proteins [BR:
zca04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
113936712 (KATNB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
WDR54
eIF2A
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_NWD2_C
PROPPIN
Beta-prop_WDR35_TULP_N
VPS8_N
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
113936712
NCBI-ProteinID:
XP_027476073
UniProt:
A0A6J2FDI0
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Position
17:complement(26838958..26860304)
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AA seq
655 aa
AA seq
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MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYKGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLFSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVAQDPVRDSRPPAQQPAHPSAPLRRIYERPSTACSKPQRVKQNSESERRS
PSSEDDRDERESRAEIQNAEEYNEIFQPKNSISRTPPRKSEPFPAPPEDDMVSAKEAAKT
NPAMDPQFPVPNLEVPPQPLAVTSTPAPKAEPTIIPATRNEPIGLKASDFLPAVKLPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRFCYKQLKSISGLVKSKSGLSGRHGSAFRELHLLMASLD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccctgtggtcaccaagacggcctggaagttacaggagattgtcgcccatgcc
agcaatgtgtcctcgctggtcctgggcaaggcctccgggcggctgctggctaccggtggg
gacgactgccgtgtcaacctgtggtccatcaacaaacccaactgcatcatgagcctgacg
ggtcacacgtccccagtggagagtgtccgcctcaataccccagaggagctcatcgtggcc
ggctcccagtcaggctccatccgcgtctgggacctagaagctgccaaaattcttcgcacg
cttatgggccacaaagccaacatctgcagcctggacttccacccatacggcgagttcgta
gcctcgggctcccaggacacgaacatcaagctatgggacatcaggaggaaaggctgcgtc
ttccgatacaagggacacagccaggctgtgcggtgcctccgtttcagccctgatgggaag
tggctggcatcggctgcggatgaccacacagtgaagctctgggatctgactgctggcaag
atgatgtccgagttccctggccacacggggcctgtcaacgtggtggagtttcaccccaat
gagtacctcctggcttctggcagctcggacaggaccatccggttctgggatctggagaag
ttccaggtggtgagctgcatcgaaggagagccagggcctgtcaggagcgtcctcttcaac
cccgacggttgctgcctattcagcggctgccaggactcgctgcgcgtctacggctgggag
cctgagcgctgctttgacgtggtcctagtcagctggggcaaggtggccgacctggctgtc
tgcaacgaccagctgataggtgtggccttctcacagagcaacgtctcctcttacgtggtg
gacctgacgcgggtcaccaggacaggcacggtggcccaggaccccgtgcgggacagccgg
cccccggcccagcagccggcccaccccagtgcccctcttcggcgcatctatgagcgtccc
agcacagcctgcagcaagcctcagagggtgaagcagaactcggagagcgagcgccgcagc
cccagcagcgaggatgaccgggacgagcgggagtcccgggccgagatccagaacgccgaa
gagtacaacgagatcttccagcccaagaacagcatcagtcggacaccaccccgaaaaagt
gagcccttcccggcaccccccgaggatgacatggtctcagccaaggaggcggccaagacc
aaccccgccatggacccgcagttcccggtgccaaatctcgaggtcccgccccagcccctg
gctgtcacttccactcctgcgcccaaggccgagcccaccatcatccctgccacccggaac
gagcccatcgggctgaaggcctctgacttcctgcccgccgtgaagctcccccagcaggcg
gagctggtcgacgaggacgccatgtcacagatccgcaaaggccatgacaccatgtgcgtg
gtactcaccagccgccacaagaacctggacactgtgcgggccgtgtggaccacaggcgac
atcaagacgtcggtggactcggctgtggccatcaatgacctgtcggtggtagtggacctc
ctgaacattgtcaaccagaaagcctccctgtggaagctggacctgtgcaccaccgtcttg
ccacagatcgagaagcttctgcagagcaagtatgagagctatgtgcagaccggctgcacc
tccctgaaactgatcctgcagcggtttctgcccctgatcactgacatcctggcagccccc
ccctctgtgggtgtggacatcagccgggaggagaggctccacaagtgccggttctgctac
aagcagcttaagagcatcagtggcctcgtgaagagcaagtcgggtttgagcggccgccac
ggcagtgcctttcgagagctgcacctgctcatggccagtttggactga
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